RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 NCOA7Q8NI08 942 aa21.45■■□□□ 1.02
CTSB-233ENST00000534636 MAP3K20Q9NYL2 800 aaKnown RBP21.45■■□□□ 1.02
CTSB-233ENST00000534636 PCDHA1Q9Y5I3 950 aa21.45■■□□□ 1.02
CTSB-233ENST00000534636 CHD7Q9P2D1 2997 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 NR3C2P08235 984 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 CYP21A2P08686 494 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 ARHGAP1Q07960 439 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 GRM4Q14833 912 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 WTAPQ15007 396 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 DGKDQ16760 1214 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 SAMD3Q8N6K7 520 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 NKX2-4Q9H2Z4 354 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 PRDM12Q9H4Q4 367 aa21.44■■□□□ 1.02
CTSB-233ENST00000534636 PALM3A6NDB9 673 aaPredicted RBP21.43■■□□□ 1.02
CTSB-233ENST00000534636 ATP2A2P16615 1042 aaKnown RBP21.43■■□□□ 1.02
CTSB-233ENST00000534636 IRX6P78412 446 aaPredicted RBP21.43■■□□□ 1.02
CTSB-233ENST00000534636 PTH1RQ03431 593 aa21.43■■□□□ 1.02
CTSB-233ENST00000534636 PTGISQ16647 500 aa21.43■■□□□ 1.02
CTSB-233ENST00000534636 PPP1R13LQ8WUF5 828 aa21.43■■□□□ 1.02
CTSB-233ENST00000534636 MTMR8Q96EF0 704 aa21.43■■□□□ 1.02
CTSB-233ENST00000534636 KATNAL1Q9BW62 490 aa21.43■■□□□ 1.02
CTSB-233ENST00000534636 MYCLP12524 364 aaPredicted RBP21.42■■□□□ 1.02
CTSB-233ENST00000534636 GHRHRQ02643 423 aa21.42■■□□□ 1.02
CTSB-233ENST00000534636 LAMC2Q13753 1193 aa21.42■■□□□ 1.02
CTSB-233ENST00000534636 PPP2R2DQ66LE6 453 aa21.42■■□□□ 1.02
CTSB-233ENST00000534636 KCNV1Q6PIU1 500 aa21.42■■□□□ 1.02
CTSB-233ENST00000534636 CATIPQ7Z7H3 387 aa21.42■■□□□ 1.02
CTSB-233ENST00000534636 CAGE1Q8TC20 777 aa21.42■■□□□ 1.02
CTSB-233ENST00000534636 EMID1Q96A84 441 aaPredicted RBP21.42■■□□□ 1.02
CTSB-233ENST00000534636 FTOQ9C0B1 505 aaKnown RBP eCLIP21.42■■□□□ 1.023e-19■□□□□ 9.3
CTSB-233ENST00000534636 DDX41Q9UJV9 622 aaKnown RBP21.42■■□□□ 1.02
CTSB-233ENST00000534636 E7EWF7 191 aa21.41■■□□□ 1.02
CTSB-233ENST00000534636 SGSM2O43147 1006 aa21.41■■□□□ 1.02
CTSB-233ENST00000534636 IQCF3P0C7M6 154 aa21.41■■□□□ 1.02
CTSB-233ENST00000534636 SESTD1Q86VW0 696 aa21.41■■□□□ 1.02
CTSB-233ENST00000534636 DHX37Q8IY37 1157 aaKnown RBP21.41■■□□□ 1.02
CTSB-233ENST00000534636 PPTC7Q8NI37 304 aa21.41■■□□□ 1.02
CTSB-233ENST00000534636 PDCD2LQ9BRP1 358 aa21.41■■□□□ 1.02
CTSB-233ENST00000534636 YBX2Q9Y2T7 364 aaKnown RBP21.41■■□□□ 1.02
CTSB-233ENST00000534636 PCDHA11Q9Y5I1 949 aa21.41■■□□□ 1.02
CTSB-233ENST00000534636 TTC28Q96AY4 2481 aa21.41■■□□□ 1.02
CTSB-233ENST00000534636 GCOM1H8Y6P7 765 aaPredicted RBP21.4■■□□□ 1.02
CTSB-233ENST00000534636 OPLAHO14841 1288 aa21.4■■□□□ 1.02
CTSB-233ENST00000534636 PPP1R11O60927 126 aaPredicted RBP21.4■■□□□ 1.02
CTSB-233ENST00000534636 POLR2MP0CAP2 368 aa21.4■■□□□ 1.02
CTSB-233ENST00000534636 HOXA13P31271 388 aaPredicted RBP21.4■■□□□ 1.02
CTSB-233ENST00000534636 RABGGTBP53611 331 aa21.4■■□□□ 1.02
CTSB-233ENST00000534636 TMEM67Q5HYA8 995 aa21.4■■□□□ 1.02
CTSB-233ENST00000534636 STOX1Q6ZVD7 989 aa21.4■■□□□ 1.02
CTSB-233ENST00000534636 C7orf31Q8N865 590 aa21.4■■□□□ 1.02
CTSB-233ENST00000534636 SYMPKQ92797 1274 aaKnown RBP21.4■■□□□ 1.02
CTSB-233ENST00000534636 PIGSQ96S52 555 aa21.4■■□□□ 1.02
CTSB-233ENST00000534636 SLC9A7Q96T83 725 aa21.4■■□□□ 1.02
CTSB-233ENST00000534636 RIOX1Q9H6W3 641 aa21.4■■□□□ 1.02
CTSB-233ENST00000534636 PNMA6FA0A0J9YX94 578 aa21.39■■□□□ 1.01
CTSB-233ENST00000534636 IGFBP4P22692 258 aa21.39■■□□□ 1.01
CTSB-233ENST00000534636 CCND2P30279 289 aa21.39■■□□□ 1.01
CTSB-233ENST00000534636 TET1Q8NFU7 2136 aa21.39■■□□□ 1.01
CTSB-233ENST00000534636 AFAP1L1Q8TED9 768 aa21.39■■□□□ 1.01
CTSB-233ENST00000534636 PPM1EQ8WY54 764 aa21.39■■□□□ 1.01
CTSB-233ENST00000534636 SPTBN5Q9NRC6 3674 aaKnown RBP21.39■■□□□ 1.01
CTSB-233ENST00000534636 PGM5Q15124 567 aa21.38■■□□□ 1.01
CTSB-233ENST00000534636 GDF6Q6KF10 455 aaPredicted RBP21.38■■□□□ 1.01
CTSB-233ENST00000534636 CASC1Q6TDU7 716 aa21.38■■□□□ 1.01
CTSB-233ENST00000534636 FCHSD1Q86WN1 690 aa21.38■■□□□ 1.01
CTSB-233ENST00000534636 USP38Q8NB14 1042 aa21.38■■□□□ 1.01
CTSB-233ENST00000534636 KAT2BQ92831 832 aa21.38■■□□□ 1.01
CTSB-233ENST00000534636 BAIAP3O94812 1187 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 PARNO95453 639 aaKnown RBP21.37■■□□□ 1.01
CTSB-233ENST00000534636 F2P00734 622 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 ZNF286BP0CG31 522 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 KIF5BP33176 963 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 PSEN2P49810 448 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 TROAPQ12815 778 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 MFSD10Q14728 455 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 VSIG10LQ86VR7 867 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 CTCFLQ8NI51 663 aaPredicted RBP21.37■■□□□ 1.01
CTSB-233ENST00000534636 VWCEQ96DN2 955 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 SPATA33Q96N06 139 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 ALG1Q9BT22 464 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 SENP2Q9HC62 589 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 GTF2IRD1Q9UHL9 959 aa21.37■■□□□ 1.01
CTSB-233ENST00000534636 RBM8AQ9Y5S9 174 aaKnown RBP21.37■■□□□ 1.01
CTSB-233ENST00000534636 SELPP16109 830 aa21.36■■□□□ 1.01
CTSB-233ENST00000534636 KCNJ6P48051 423 aa21.36■■□□□ 1.01
CTSB-233ENST00000534636 KIAA0753Q2KHM9 967 aa21.36■■□□□ 1.01
CTSB-233ENST00000534636 GNPTABQ3T906 1256 aa21.36■■□□□ 1.01
CTSB-233ENST00000534636 CELF3Q5SZQ8 465 aaKnown RBP21.36■■□□□ 1.01
CTSB-233ENST00000534636 LRRC8DQ7L1W4 858 aa21.36■■□□□ 1.01
CTSB-233ENST00000534636 PHOSPHO2Q8TCD6 241 aa21.36■■□□□ 1.01
CTSB-233ENST00000534636 MAP4K1Q92918 833 aa21.36■■□□□ 1.01
CTSB-233ENST00000534636 SEC63Q9UGP8 760 aaKnown RBP21.36■■□□□ 1.01
CTSB-233ENST00000534636 TRANK1O15050 2925 aa21.36■■□□□ 1.01
CTSB-233ENST00000534636 KIF28PB7ZC32 967 aa21.35■■□□□ 1.01
CTSB-233ENST00000534636 CYTH3O43739 400 aa21.35■■□□□ 1.01
CTSB-233ENST00000534636 SORBS3O60504 671 aa21.35■■□□□ 1.01
CTSB-233ENST00000534636 DDAH1O94760 285 aa21.35■■□□□ 1.01
CTSB-233ENST00000534636 GGPS1O95749 300 aa21.35■■□□□ 1.01
CTSB-233ENST00000534636 TGFB3P10600 412 aa21.35■■□□□ 1.01
CTSB-233ENST00000534636 MYOGP15173 224 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms