RNA–Protein interactions for RNA: ENST00000534010.1

SDHD-208, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 2

Gene SDHD, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-208ENST00000534010 TXNP10599 105 aaKnown RBP12.53□□□□□ -0.4
SDHD-208ENST00000534010 ICAM3P32942 547 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 KIF5BP33176 963 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 GNAQP50148 359 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
SDHD-208ENST00000534010 SEMA3FQ13275 785 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 CASC1Q6TDU7 716 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 TEX2Q8IWB9 1127 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 FANCBQ8NB91 859 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 INPP4AQ96PE3 977 aaPredicted RBP12.53□□□□□ -0.4
SDHD-208ENST00000534010 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
SDHD-208ENST00000534010 NOC4LQ9BVI4 516 aaKnown RBP12.53□□□□□ -0.4
SDHD-208ENST00000534010 ALDH8A1Q9H2A2 487 aaPredicted RBP12.53□□□□□ -0.4
SDHD-208ENST00000534010 TMEM39AQ9NV64 488 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 BRPF3Q9ULD4 1205 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 CNTNAP5Q8WYK1 1306 aa12.53□□□□□ -0.4
SDHD-208ENST00000534010 GCOM1H8Y6P7 765 aaPredicted RBP12.52□□□□□ -0.41
SDHD-208ENST00000534010 HAS3O00219 553 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 KPNA6O60684 536 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 MMP3P08254 477 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 POLR2MP0CAP2 368 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 TGFB3P10600 412 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 EIF2AK2P19525 551 aaKnown RBP12.52□□□□□ -0.41
SDHD-208ENST00000534010 HOXA13P31271 388 aaPredicted RBP12.52□□□□□ -0.41
SDHD-208ENST00000534010 HOXC8P31273 242 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 EVCP57679 992 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 PSMC6P62333 389 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 SP2Q02086 613 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 PTPN11Q06124 597 aaPredicted RBP12.52□□□□□ -0.41
SDHD-208ENST00000534010 LY6KQ17RY6 165 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 RNF20Q5VTR2 975 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 MYSM1Q5VVJ2 828 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 NFRKBQ6P4R8 1299 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 HOMER1Q86YM7 354 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 OR6J1Q8NGC5 347 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 CTCFLQ8NI51 663 aaPredicted RBP12.52□□□□□ -0.41
SDHD-208ENST00000534010 MTG1Q9BT17 334 aaPredicted RBP12.52□□□□□ -0.41
SDHD-208ENST00000534010 LRRC2Q9BYS8 371 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 WNT8AQ9H1J5 351 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 PRDM5Q9NQX1 630 aaPredicted RBP12.52□□□□□ -0.41
SDHD-208ENST00000534010 GBF1Q92538 1859 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 CUL9Q8IWT3 2517 aa12.52□□□□□ -0.41
SDHD-208ENST00000534010 PTPRSQ13332 1948 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 DHX16O60231 1041 aaKnown RBP12.51□□□□□ -0.41
SDHD-208ENST00000534010 STAM2O75886 525 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 GH1P01241 217 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 RAG1P15918 1043 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 SMAD3P84022 425 aaKnown RBP12.51□□□□□ -0.41
SDHD-208ENST00000534010 FPGSQ05932 587 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 RBL2Q08999 1139 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 KRT32Q14532 448 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 TMEM240Q5SV17 173 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 ARHGEF16Q5VV41 709 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 TYW1BQ6NUM6 668 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 PPTC7Q8NI37 304 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 TRPV6Q9H1D0 765 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 MTMR10Q9NXD2 777 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 SNX14Q9Y5W7 946 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 UMODL1Q5DID0 1318 aa12.51□□□□□ -0.41
SDHD-208ENST00000534010 CCDC69A6NI79 296 aa12.5□□□□□ -0.41
SDHD-208ENST00000534010 TLR3O15455 904 aaKnown RBP12.5□□□□□ -0.41
SDHD-208ENST00000534010 F2P00734 622 aa12.5□□□□□ -0.41
SDHD-208ENST00000534010 HMGB1P09429 215 aaKnown RBP12.5□□□□□ -0.41
SDHD-208ENST00000534010 RXRAP19793 462 aa12.5□□□□□ -0.41
SDHD-208ENST00000534010 NBPF20Q3BBV1 942 aa12.5□□□□□ -0.41
SDHD-208ENST00000534010 XRRA1Q6P2D8 792 aa12.5□□□□□ -0.41
SDHD-208ENST00000534010 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
SDHD-208ENST00000534010 NOL8Q76FK4 1167 aaKnown RBP12.5□□□□□ -0.41
SDHD-208ENST00000534010 CMTR1Q8N1G2 835 aaKnown RBP12.5□□□□□ -0.41
SDHD-208ENST00000534010 AFG1LQ8WV93 481 aa12.5□□□□□ -0.41
SDHD-208ENST00000534010 GPKOWQ92917 476 aaPredicted RBP eCLIP12.5□□□□□ -0.41
SDHD-208ENST00000534010 RRP36Q96EU6 259 aaKnown RBP12.5□□□□□ -0.41
SDHD-208ENST00000534010 IL17RAQ96F46 866 aa12.5□□□□□ -0.41
SDHD-208ENST00000534010 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
SDHD-208ENST00000534010 SLC12A7Q9Y666 1083 aa12.5□□□□□ -0.41
SDHD-208ENST00000534010 MUC3AQ02505 3323 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 SPATA31C2B4DYI2 1134 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 CSF2RAP15509 400 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 UBA1P22314 1058 aaKnown RBP12.49□□□□□ -0.41
SDHD-208ENST00000534010 CDC27P30260 824 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 LAMC2Q13753 1193 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 HSDL1Q3SXM5 330 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 CELF3Q5SZQ8 465 aaKnown RBP12.49□□□□□ -0.41
SDHD-208ENST00000534010 PCNX4Q63HM2 1172 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 USP17L6PQ6QN14 398 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 SEPT14Q6ZU15 432 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 TCEANC2Q96MN5 208 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 SENP7Q9BQF6 1050 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 BCAS3Q9H6U6 928 aa12.49□□□□□ -0.41
SDHD-208ENST00000534010 TRMT13Q9NUP7 481 aaKnown RBP12.49□□□□□ -0.41
SDHD-208ENST00000534010 RBM28Q9NW13 759 aaKnown RBP12.49□□□□□ -0.41
SDHD-208ENST00000534010 MYO9BQ13459 2157 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 TMEM265A0A087WTH1 108 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 PITPNM1O00562 1244 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 PPFIA4O75335 1185 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 CCND2P30279 289 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 CYP2C18P33260 490 aa12.48□□□□□ -0.41
SDHD-208ENST00000534010 CLK2P49760 499 aaKnown RBP12.48□□□□□ -0.41
SDHD-208ENST00000534010 PPIGQ13427 754 aaKnown RBP eCLIP12.48□□□□□ -0.41
SDHD-208ENST00000534010 GPNMBQ14956 572 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms