RNA–Protein interactions for RNA: ENST00000533908.5

UBXN1-216, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best)

Gene UBXN1, Length 739 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-216ENST00000533908 TRIP12Q14669 1992 aaPredicted RBP21.08■□□□□ 0.96
UBXN1-216ENST00000533908 LAMA4Q16363 1823 aa21.08■□□□□ 0.96
UBXN1-216ENST00000533908 PARP1P09874 1014 aaKnown RBP21.07■□□□□ 0.96
UBXN1-216ENST00000533908 EIF2AK2P19525 551 aaKnown RBP21.07■□□□□ 0.96
UBXN1-216ENST00000533908 POU3F3P20264 500 aaPredicted RBP21.07■□□□□ 0.96
UBXN1-216ENST00000533908 TFF2Q03403 129 aa21.07■□□□□ 0.96
UBXN1-216ENST00000533908 TAP1Q03518 808 aa21.07■□□□□ 0.96
UBXN1-216ENST00000533908 TCTN1Q2MV58 587 aa21.07■□□□□ 0.96
UBXN1-216ENST00000533908 SESTD1Q86VW0 696 aa21.07■□□□□ 0.96
UBXN1-216ENST00000533908 MCF2L2Q86YR7 1114 aa21.07■□□□□ 0.96
UBXN1-216ENST00000533908 HERC6Q8IVU3 1022 aa21.07■□□□□ 0.96
UBXN1-216ENST00000533908 SLC9A7Q96T83 725 aa21.07■□□□□ 0.96
UBXN1-216ENST00000533908 DIAPH3Q9NSV4 1193 aa21.07■□□□□ 0.96
UBXN1-216ENST00000533908 TRANK1O15050 2925 aa21.07■□□□□ 0.96
UBXN1-216ENST00000533908 PPP1R11O60927 126 aaPredicted RBP21.06■□□□□ 0.96
UBXN1-216ENST00000533908 BMP1P13497 986 aa21.06■□□□□ 0.96
UBXN1-216ENST00000533908 AAMPQ13685 434 aa21.06■□□□□ 0.96
UBXN1-216ENST00000533908 TMCO2Q7Z6W1 182 aaPredicted RBP21.06■□□□□ 0.96
UBXN1-216ENST00000533908 EXOC6Q8TAG9 804 aa21.06■□□□□ 0.96
UBXN1-216ENST00000533908 NECAB3Q96P71 396 aaPredicted RBP21.06■□□□□ 0.96
UBXN1-216ENST00000533908 NOD1Q9Y239 953 aa21.06■□□□□ 0.96
UBXN1-216ENST00000533908 MRPL11Q9Y3B7 192 aaKnown RBP21.06■□□□□ 0.96
UBXN1-216ENST00000533908 TANC1Q9C0D5 1861 aa21.06■□□□□ 0.96
UBXN1-216ENST00000533908 PRRC2BQ5JSZ5 2229 aaKnown RBP21.06■□□□□ 0.96
UBXN1-216ENST00000533908 KIAA1217Q5T5P2 1943 aa21.06■□□□□ 0.96
UBXN1-216ENST00000533908 DHX16O60231 1041 aaKnown RBP21.05■□□□□ 0.96
UBXN1-216ENST00000533908 CFBP00751 764 aa21.05■□□□□ 0.96
UBXN1-216ENST00000533908 NR3C2P08235 984 aa21.05■□□□□ 0.96
UBXN1-216ENST00000533908 CASTP20810 708 aaKnown RBP21.05■□□□□ 0.96
UBXN1-216ENST00000533908 NT5C2P49902 561 aa21.05■□□□□ 0.96
UBXN1-216ENST00000533908 SEC23AQ15436 765 aa21.05■□□□□ 0.96
UBXN1-216ENST00000533908 IMMTQ16891 758 aaKnown RBP21.05■□□□□ 0.96
UBXN1-216ENST00000533908 SLC35G1Q2M3R5 365 aa21.05■□□□□ 0.96
UBXN1-216ENST00000533908 ARHGEF16Q5VV41 709 aa21.05■□□□□ 0.96
UBXN1-216ENST00000533908 CYB5R4Q7L1T6 521 aa21.05■□□□□ 0.96
UBXN1-216ENST00000533908 PXMP2Q9NR77 195 aa21.05■□□□□ 0.96
UBXN1-216ENST00000533908 HDAC6Q9UBN7 1215 aa21.05■□□□□ 0.96
UBXN1-216ENST00000533908 PTPRSQ13332 1948 aa21.04■□□□□ 0.96
UBXN1-216ENST00000533908 EIF3JO75822 258 aaKnown RBP21.04■□□□□ 0.96
UBXN1-216ENST00000533908 RGS20O76081 388 aa21.04■□□□□ 0.96
UBXN1-216ENST00000533908 HSD17B4P51659 736 aa21.04■□□□□ 0.96
UBXN1-216ENST00000533908 HIC1Q14526 733 aa21.04■□□□□ 0.96
UBXN1-216ENST00000533908 ARNTL2Q8WYA1 636 aa21.04■□□□□ 0.96
UBXN1-216ENST00000533908 MTMR8Q96EF0 704 aa21.04■□□□□ 0.96
UBXN1-216ENST00000533908 UHRF1Q96T88 793 aaPredicted RBP21.04■□□□□ 0.96
UBXN1-216ENST00000533908 GTF2IRD1Q9UHL9 959 aa21.04■□□□□ 0.96
UBXN1-216ENST00000533908 LCHNA4D1U4 455 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 NBNO60934 754 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 SELPP16109 830 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 PSEN2P49810 448 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 ZNF200P98182 395 aaPredicted RBP21.03■□□□□ 0.96
UBXN1-216ENST00000533908 GHRHRQ02643 423 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 DGKDQ16760 1214 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 CAGE1Q8TC20 777 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 AFAP1L1Q8TED9 768 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 WNT8BQ93098 351 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 EMID1Q96A84 441 aaPredicted RBP21.03■□□□□ 0.96
UBXN1-216ENST00000533908 ALG1Q9BT22 464 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 KRT23Q9C075 422 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 BDP1A6H8Y1 2624 aa21.03■□□□□ 0.96
UBXN1-216ENST00000533908 TCF20Q9UGU0 1960 aaKnown RBP21.03■□□□□ 0.96
UBXN1-216ENST00000533908 MYH6P13533 1939 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 KLRF2D3W0D1 207 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 HAS3O00219 553 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 LPXNO60711 386 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 BAIAP3O94812 1187 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 CKBP12277 381 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 KCNQ1P51787 676 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 WDR5P61964 334 aaKnown RBP21.02■□□□□ 0.96
UBXN1-216ENST00000533908 RBL2Q08999 1139 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 TRIM71Q2Q1W2 868 aaKnown RBP21.02■□□□□ 0.96
UBXN1-216ENST00000533908 TRAF7Q6Q0C0 670 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 LRRC8DQ7L1W4 858 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 ZFP91Q96JP5 570 aaPredicted RBP21.02■□□□□ 0.96
UBXN1-216ENST00000533908 PDCD2LQ9BRP1 358 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 UBAC1Q9BSL1 405 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 AMNQ9BXJ7 453 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 RAPGEFL1Q9UHV5 662 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 CTNNA3Q9UI47 895 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 MAD2L2Q9UI95 211 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 MRVI1Q9Y6F6 885 aa21.02■□□□□ 0.96
UBXN1-216ENST00000533908 PALM3A6NDB9 673 aaPredicted RBP21.01■□□□□ 0.95
UBXN1-216ENST00000533908 HIP1O00291 1037 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 SORBS3O60504 671 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 CXCL10P02778 98 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 ZNF286BP0CG31 522 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 HOXA13P31271 388 aaPredicted RBP21.01■□□□□ 0.95
UBXN1-216ENST00000533908 DEFB103AP81534 67 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 SP2Q02086 613 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 LAMC2Q13753 1193 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 IFIT1BQ5T764 474 aaKnown RBP21.01■□□□□ 0.95
UBXN1-216ENST00000533908 STOX1Q6ZVD7 989 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 DHX37Q8IY37 1157 aaKnown RBP21.01■□□□□ 0.95
UBXN1-216ENST00000533908 IL31RAQ8NI17 732 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 TSPYL2Q9H2G4 693 aaPredicted RBP21.01■□□□□ 0.95
UBXN1-216ENST00000533908 SENP2Q9HC62 589 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 NCOR1O75376 2440 aa21.01■□□□□ 0.95
UBXN1-216ENST00000533908 MYH7BA7E2Y1 1941 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 TLL1O43897 1013 aa21■□□□□ 0.95
UBXN1-216ENST00000533908 F2P00734 622 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms