RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 GJB1P08034 283 aa18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 CYP3A4P08684 503 aa18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 CNGA1P29973 690 aa18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 MRPS9P82933 396 aaKnown RBP18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 SAFBQ15424 915 aaKnown RBP eCLIP18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 CCDC144BQ3MJ40 725 aa18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 KRT25Q7Z3Z0 450 aa18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 CRYGNQ8WXF5 182 aa18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 PGBD1Q96JS3 809 aa18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 TMEM106CQ9BVX2 250 aa18.79■□□□□ 0.6
PACSIN3-210ENST00000533686 MYCP01106 439 aaPredicted RBP18.78■□□□□ 0.6
PACSIN3-210ENST00000533686 ARHGAP4P98171 946 aa18.78■□□□□ 0.6
PACSIN3-210ENST00000533686 LHX8Q68G74 356 aa18.78■□□□□ 0.6
PACSIN3-210ENST00000533686 KCNV1Q6PIU1 500 aa18.78■□□□□ 0.6
PACSIN3-210ENST00000533686 DIS3L2Q8IYB7 885 aaKnown RBP18.78■□□□□ 0.6
PACSIN3-210ENST00000533686 OXER1Q8TDS5 423 aa18.78■□□□□ 0.6
PACSIN3-210ENST00000533686 SCFD2Q8WU76 684 aa18.78■□□□□ 0.6
PACSIN3-210ENST00000533686 INPP4AQ96PE3 977 aaPredicted RBP18.78■□□□□ 0.6
PACSIN3-210ENST00000533686 PDGFCQ9NRA1 345 aa18.78■□□□□ 0.6
PACSIN3-210ENST00000533686 RGS20O76081 388 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 ICAM3P32942 547 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 ADCYAP1R1P41586 468 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 USP11P51784 963 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 FOSBP53539 338 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 GUCY1B3Q02153 619 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 TNFAIP2Q03169 654 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 TTLL4Q14679 1199 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 GNPTABQ3T906 1256 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 TNFRSF25Q93038 417 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 UBIAD1Q9Y5Z9 338 aa18.77■□□□□ 0.6
PACSIN3-210ENST00000533686 MCM3APO60318 1980 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 CCDC194A0A1B0GVG4 234 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 BTBD18B2RXH4 712 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 NKRFO15226 690 aaKnown RBP eCLIP18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 MAFGO15525 162 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 DUSP11O75319 330 aaKnown RBP18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 SGPL1O95470 568 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 TGFB3P10600 412 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 RARBP10826 455 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 PDCP20941 246 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 CIITAP33076 1130 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 GJA8P48165 433 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 BECN1Q14457 450 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 NONOQ15233 471 aaKnown RBP eCLIP18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 DUSP28Q4G0W2 176 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 LARP1BQ659C4 914 aaKnown RBP18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 CCDC62Q6P9F0 684 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 SEPT14Q6ZU15 432 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 NLRX1Q86UT6 975 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 TBCKQ8TEA7 893 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 GPRASP2Q96D09 838 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 DEFB118Q96PH6 123 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 WDR11Q9BZH6 1224 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 CRISPLD2Q9H0B8 497 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 FOXP1Q9H334 677 aaPredicted RBP18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 RTEL1Q9NZ71 1219 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 Q9Y3F1 56 aa18.76■□□□□ 0.59
PACSIN3-210ENST00000533686 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 SPATA31C2B4DYI2 1134 aa18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 SMPD1P17405 629 aa18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 NR5A1Q13285 461 aa18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 CEP55Q53EZ4 464 aa18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 NIPA1Q7RTP0 329 aa18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 U2AF1L4Q8WU68 220 aaKnown RBP18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 CDHR1Q96JP9 859 aa18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 MXRA8Q9BRK3 442 aa18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 JADE2Q9NQC1 790 aa18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 GNEQ9Y223 722 aaKnown RBP18.75■□□□□ 0.59
PACSIN3-210ENST00000533686 LRRC37A2A6NM11 1700 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 MEIS1O00470 390 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 ADCY6O43306 1168 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 FIBPO43427 364 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 EDIL3O43854 480 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 HSP90AA1P07900 732 aaKnown RBP18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 TXNP10599 105 aaKnown RBP18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 ITGB5P18084 799 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 ZNF76P36508 570 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 NKX3-2P78367 333 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 ZFP91Q96JP5 570 aaPredicted RBP18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 DDX41Q9UJV9 622 aaKnown RBP18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 OGDHLQ9ULD0 1010 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 MRVI1Q9Y6F6 885 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 CENPFP49454 3210 aa18.74■□□□□ 0.59
PACSIN3-210ENST00000533686 H3BQV1 296 aa18.73■□□□□ 0.59
PACSIN3-210ENST00000533686 ARIH2O95376 493 aa18.73■□□□□ 0.59
PACSIN3-210ENST00000533686 U2AF2P26368 475 aaKnown RBP eCLIP18.73■□□□□ 0.59
PACSIN3-210ENST00000533686 IFFO2Q5TF58 517 aa18.73■□□□□ 0.59
PACSIN3-210ENST00000533686 MOXD1Q6UVY6 613 aa18.73■□□□□ 0.59
PACSIN3-210ENST00000533686 PIK3AP1Q6ZUJ8 805 aa18.73■□□□□ 0.59
PACSIN3-210ENST00000533686 SENP7Q9BQF6 1050 aa18.73■□□□□ 0.59
PACSIN3-210ENST00000533686 UPF3AQ9H1J1 476 aaKnown RBP18.73■□□□□ 0.59
PACSIN3-210ENST00000533686 FOXD4L1Q9NU39 408 aa18.73■□□□□ 0.59
PACSIN3-210ENST00000533686 CYP3A7-CYP3A51PA0A087WV96 503 aa18.72■□□□□ 0.59
PACSIN3-210ENST00000533686 CCDC85CA6NKD9 419 aa18.72■□□□□ 0.59
PACSIN3-210ENST00000533686 FAM86B1E9PN63 330 aa18.72■□□□□ 0.59
PACSIN3-210ENST00000533686 FAM86B2P0C5J1 330 aa18.72■□□□□ 0.59
PACSIN3-210ENST00000533686 CYP3A7P24462 503 aa18.72■□□□□ 0.59
PACSIN3-210ENST00000533686 GJA9P57773 515 aa18.72■□□□□ 0.59
PACSIN3-210ENST00000533686 SEMA3FQ13275 785 aa18.72■□□□□ 0.59
PACSIN3-210ENST00000533686 MTMR1Q13613 665 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms