RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 CAPN1P07384 714 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 CCND1P24385 295 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 RBM6P78332 1123 aaKnown RBP8.5□□□□□ -1.05
CSRP1-218ENST00000533402 CNNM2Q9H8M5 875 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 ZNF408Q9H9D4 720 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 BAG5Q9UL15 447 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 DCCP43146 1447 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 CUL4BQ13620 913 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 CHST3Q7LGC8 479 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 RNF169Q8NCN4 708 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 GRK7Q8WTQ7 553 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 POLKQ9UBT6 870 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 RASGRF2O14827 1237 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 HDAC4P56524 1084 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 PDE4DQ08499 809 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 TRMT10CQ7L0Y3 403 aaKnown RBP8.5□□□□□ -1.05
CSRP1-218ENST00000533402 PLIN2Q99541 437 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 TMEM60Q9H2L4 133 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 RIC8AQ9NPQ8 531 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 DEAF1O75398 565 aaPredicted RBP8.5□□□□□ -1.05
CSRP1-218ENST00000533402 EPB41P11171 864 aaKnown RBP8.5□□□□□ -1.05
CSRP1-218ENST00000533402 MAN1A1P33908 653 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 BIRC3Q13489 604 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 NCAPH2Q6IBW4 605 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 OMA1Q96E52 524 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 DIABLOQ9NR28 239 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 USP6P35125 1406 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 GOLGA8QA0A0J9YX86 632 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 GOLGA8OA6NCC3 632 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 GOLGA8NF8WBI6 632 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 RPS6KB1P23443 525 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 ADCY1Q08828 1119 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 PLCB4Q15147 1175 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 TBC1D22AQ8WUA7 517 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 LZICQ8WZA0 190 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 MEIS3Q99687 375 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 ZBTB40Q9NUA8 1239 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 GID8Q9NWU2 228 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 RGL1Q9NZL6 768 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 EHD2Q9NZN4 543 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 PASKQ96RG2 1323 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 PDE6AP16499 860 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 KRT4P19013 534 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 C1orf146Q5VVC0 180 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 KLHL23Q8NBE8 558 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 HIPK4Q8NE63 616 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 CLMNQ96JQ2 1002 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 CCDC85AQ96PX6 553 aaPredicted RBP8.5□□□□□ -1.05
CSRP1-218ENST00000533402 LRRC37BQ96QE4 947 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 PITPNM3Q9BZ71 974 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 NEXMIFQ5QGS0 1516 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 CEP170BQ9Y4F5 1589 aaPredicted RBP8.5□□□□□ -1.05
CSRP1-218ENST00000533402 AP1G2O75843 785 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 KRT7P08729 469 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 HDLBPQ00341 1268 aaKnown RBP8.5□□□□□ -1.05
CSRP1-218ENST00000533402 GOLGA8FQ08AF8 430 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 GOLGA8DPQ0D2H9 430 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 KRT79Q5XKE5 535 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 CASC4Q6P4E1 433 aa8.5□□□□□ -1.05
CSRP1-218ENST00000533402 VWDEQ8N2E2 1590 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 NOP56O00567 594 aaKnown RBP8.49□□□□□ -1.05
CSRP1-218ENST00000533402 IL1RL1Q01638 556 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 KSR2Q6VAB6 950 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 SYT2Q8N9I0 419 aaPredicted RBP8.49□□□□□ -1.05
CSRP1-218ENST00000533402 LINS1Q8NG48 757 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 NSMCE1Q8WV22 266 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 RIMS1Q86UR5 1692 aaKnown RBP8.49□□□□□ -1.05
CSRP1-218ENST00000533402 KCNJ18B7U540 433 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 SLC7A5Q01650 507 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 KCNJ12Q14500 433 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 ADALQ6DHV7 355 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 RFWD2Q8NHY2 731 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 PPP2R3CQ969Q6 453 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 TTC1Q99614 292 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 VAT1LQ9HCJ6 419 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 KRT82Q9NSB4 513 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 SLAIN2Q9P270 581 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 PLAAQ9Y263 795 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 MYO1FO00160 1098 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 ASPHQ12797 758 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 PPP2R5CQ13362 524 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 EAPPQ56P03 285 aaPredicted RBP8.49□□□□□ -1.05
CSRP1-218ENST00000533402 TCP11X2Q5H9J9 407 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 CAPN12Q6ZSI9 719 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 TTC6Q86TZ1 520 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 ZBED2Q9BTP6 218 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 MCM8Q9UJA3 840 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 THRAP3Q9Y2W1 955 aaKnown RBP8.49□□□□□ -1.05
CSRP1-218ENST00000533402 POC1B-GALNT4F8VUJ3 575 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 SLCO1A2P46721 670 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 CCNA1P78396 465 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 EHHADHQ08426 723 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 EIF4A2Q14240 407 aaKnown RBP8.49□□□□□ -1.05
CSRP1-218ENST00000533402 TSPAN9O75954 239 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 ECE1P42892 770 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 DNM2P50570 870 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 LARGE2Q8N3Y3 721 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 KIFC2Q96AC6 838 aa8.49□□□□□ -1.05
CSRP1-218ENST00000533402 DCPSQ96C86 337 aaKnown RBP8.49□□□□□ -1.05
CSRP1-218ENST00000533402 PIK3C2BO00750 1634 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms