RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 IFT74Q96LB3 600 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 PCIF1Q9H4Z3 704 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 USP42Q9H9J4 1324 aaKnown RBP13.41□□□□□ -0.26
BDNF-218ENST00000533246 NCAPD2Q15021 1401 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 CCDC121Q6ZUS5 278 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 NLRX1Q86UT6 975 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 SRBD1Q8N5C6 995 aaKnown RBP13.41□□□□□ -0.26
BDNF-218ENST00000533246 BRIP1Q9BX63 1249 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 PTPRUQ92729 1446 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 TUBB2AQ13885 445 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 GPATCH4Q5T3I0 446 aaKnown RBP13.41□□□□□ -0.26
BDNF-218ENST00000533246 ARMCX5Q6P1M9 558 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 SARM1Q6SZW1 724 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 TUBB2BQ9BVA1 445 aa13.41□□□□□ -0.26
BDNF-218ENST00000533246 PPANQ9NQ55 473 aaKnown RBP13.41□□□□□ -0.26
BDNF-218ENST00000533246 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 ENO4A6NNW6 628 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 K7ENM7 598 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 KRIT1O00522 736 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 NDUFA10O95299 355 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 KRT19P08727 400 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 H2AFZP0C0S5 128 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 POLR2MP0CAP2 368 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 EIF4A3P38919 411 aaKnown RBP13.4□□□□□ -0.26
BDNF-218ENST00000533246 SLC7A5Q01650 507 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 COL9A3Q14050 684 aaPredicted RBP13.4□□□□□ -0.26
BDNF-218ENST00000533246 BRD3Q15059 726 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 TXNRD1Q16881 649 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 H2AFVQ71UI9 128 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 ARL10Q8N8L6 244 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 RABGGTAQ92696 567 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 SAAL1Q96ER3 474 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 RMI1Q9H9A7 625 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 SUGCTQ9HAC7 445 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 EPB41L4AQ9HCS5 686 aaPredicted RBP13.4□□□□□ -0.26
BDNF-218ENST00000533246 UTP11Q9Y3A2 253 aaKnown RBP13.4□□□□□ -0.26
BDNF-218ENST00000533246 RABGAP1Q9Y3P9 1069 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 IFNB1P01574 187 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 CCNE1P24864 410 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 FAM133AQ8N9E0 248 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 PAGR1Q9BTK6 254 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 LARSQ9P2J5 1176 aaKnown RBP13.4□□□□□ -0.26
BDNF-218ENST00000533246 ADGRB1O14514 1584 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 LAMC1P11047 1609 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 MOCS3O95396 460 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 ZBTB16Q05516 673 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 ZNF365Q70YC5 407 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 SGMS1Q86VZ5 419 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 PIGOQ8TEQ8 1089 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 BHMT2Q9H2M3 363 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 NARFQ9UHQ1 456 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 LCMT1Q9UIC8 334 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 COL4A3BPQ9Y5P4 624 aa13.4□□□□□ -0.26
BDNF-218ENST00000533246 ABCA9Q8IUA7 1624 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 PRPF6O94906 941 aaKnown RBP13.39□□□□□ -0.27
BDNF-218ENST00000533246 EEF1GP26641 437 aaKnown RBP13.39□□□□□ -0.27
BDNF-218ENST00000533246 E2F5Q15329 346 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 CAPN12Q6ZSI9 719 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 GLG1Q92896 1179 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 DHTKD1Q96HY7 919 aaPredicted RBP13.39□□□□□ -0.27
BDNF-218ENST00000533246 IQCGQ9H095 443 aaKnown RBP13.39□□□□□ -0.27
BDNF-218ENST00000533246 CCPG1Q9ULG6 757 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 HYOU1Q9Y4L1 999 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 NOP56O00567 594 aaKnown RBP13.39□□□□□ -0.27
BDNF-218ENST00000533246 ZBED4O75132 1171 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 PAK2Q13177 524 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 ASPRV1Q53RT3 343 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 TCP11X2Q5H9J9 407 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 PHLDB2Q86SQ0 1253 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 VTI1AQ96AJ9 217 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 TDRD3Q9H7E2 651 aaKnown RBP13.39□□□□□ -0.27
BDNF-218ENST00000533246 ADAM21Q9UKJ8 722 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 LMTK2Q8IWU2 1503 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 GH2P01242 217 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 BCRP11274 1271 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 ELF1P32519 619 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 FMR1Q06787 632 aaKnown RBP eCLIP13.39□□□□□ -0.27
BDNF-218ENST00000533246 STRN3Q13033 797 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 PFKFB3Q16875 520 aaPredicted RBP13.39□□□□□ -0.27
BDNF-218ENST00000533246 DCUN1D2Q6PH85 259 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 MGARPQ8TDB4 240 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 FBF1Q8TES7 1133 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 CCDC17Q96LX7 622 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 KRT12Q99456 494 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.39□□□□□ -0.27
BDNF-218ENST00000533246 RWDD2AQ9UIY3 292 aa13.39□□□□□ -0.27
BDNF-218ENST00000533246 CDHR2Q9BYE9 1310 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 NDST4Q9H3R1 872 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 TMOD4Q9NZQ9 345 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 CEP170BQ9Y4F5 1589 aaPredicted RBP13.38□□□□□ -0.27
BDNF-218ENST00000533246 POLR1AO95602 1720 aaPredicted RBP13.38□□□□□ -0.27
BDNF-218ENST00000533246 ACTN4O43707 911 aaKnown RBP13.38□□□□□ -0.27
BDNF-218ENST00000533246 BUB1BO60566 1050 aaPredicted RBP13.38□□□□□ -0.27
BDNF-218ENST00000533246 CSF1RP07333 972 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 RWDD2BP57060 319 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 TRPC3Q13507 836 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 DDX12PQ92771 950 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 KIFAP3Q92845 792 aa13.38□□□□□ -0.27
BDNF-218ENST00000533246 EMILIN3Q9NT22 766 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms