RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 CD4P01730 458 aa34.96■■■■□ 3.19
SSSCA1-207ENST00000533115 LRCH3Q96II8 777 aa34.96■■■■□ 3.19
SSSCA1-207ENST00000533115 JAKMIP1Q96N16 626 aaKnown RBP34.96■■■■□ 3.19
SSSCA1-207ENST00000533115 MTG1Q9BT17 334 aaPredicted RBP34.96■■■■□ 3.19
SSSCA1-207ENST00000533115 RBM28Q9NW13 759 aaKnown RBP34.96■■■■□ 3.19
SSSCA1-207ENST00000533115 DDX41Q9UJV9 622 aaKnown RBP34.96■■■■□ 3.19
SSSCA1-207ENST00000533115 ZBTB43O43298 467 aa34.95■■■■□ 3.19
SSSCA1-207ENST00000533115 KPNA6O60684 536 aa34.95■■■■□ 3.19
SSSCA1-207ENST00000533115 TIMP1P01033 207 aa34.95■■■■□ 3.19
SSSCA1-207ENST00000533115 ARHGAP1Q07960 439 aa34.95■■■■□ 3.19
SSSCA1-207ENST00000533115 IL31RAQ8NI17 732 aa34.95■■■■□ 3.19
SSSCA1-207ENST00000533115 MRVI1Q9Y6F6 885 aa34.95■■■■□ 3.19
SSSCA1-207ENST00000533115 CPA1P15085 419 aa34.94■■■■□ 3.18
SSSCA1-207ENST00000533115 CCND2P30279 289 aa34.94■■■■□ 3.18
SSSCA1-207ENST00000533115 CUL5Q93034 780 aa34.94■■■■□ 3.18
SSSCA1-207ENST00000533115 KLF18A0A0U1RQI7 1052 aa34.93■■■■□ 3.18
SSSCA1-207ENST00000533115 hCG_1642624A0A1W2PR95 340 aa34.93■■■■□ 3.18
SSSCA1-207ENST00000533115 RGS20O76081 388 aa34.93■■■■□ 3.18
SSSCA1-207ENST00000533115 FGD1P98174 961 aa34.93■■■■□ 3.18
SSSCA1-207ENST00000533115 SMARCC2Q8TAQ2 1214 aa34.93■■■■□ 3.18
SSSCA1-207ENST00000533115 FRMPD4Q14CM0 1322 aa34.92■■■■□ 3.18
SSSCA1-207ENST00000533115 EPB41L2O43491 1005 aaKnown RBP34.92■■■■□ 3.18
SSSCA1-207ENST00000533115 FPGSQ05932 587 aa34.92■■■■□ 3.18
SSSCA1-207ENST00000533115 SHHQ15465 462 aa34.92■■■■□ 3.18
SSSCA1-207ENST00000533115 RTN1Q16799 776 aa34.92■■■■□ 3.18
SSSCA1-207ENST00000533115 BLOC1S2Q6QNY1 142 aa34.92■■■■□ 3.18
SSSCA1-207ENST00000533115 AFG1LQ8WV93 481 aa34.92■■■■□ 3.18
SSSCA1-207ENST00000533115 PIK3CDO00329 1044 aa34.91■■■■□ 3.18
SSSCA1-207ENST00000533115 KCNV1Q6PIU1 500 aa34.91■■■■□ 3.18
SSSCA1-207ENST00000533115 USP17L6PQ6QN14 398 aa34.91■■■■□ 3.18
SSSCA1-207ENST00000533115 EMID1Q96A84 441 aaPredicted RBP34.91■■■■□ 3.18
SSSCA1-207ENST00000533115 MEIS2O14770 477 aa34.9■■■■□ 3.18
SSSCA1-207ENST00000533115 MMP3P08254 477 aa34.9■■■■□ 3.18
SSSCA1-207ENST00000533115 RCAN1P53805 252 aa34.9■■■■□ 3.18
SSSCA1-207ENST00000533115 C9orf50Q5SZB4 431 aa34.9■■■■□ 3.18
SSSCA1-207ENST00000533115 MFSD5Q6N075 450 aa34.9■■■■□ 3.18
SSSCA1-207ENST00000533115 Q6ZUG5 572 aa34.9■■■■□ 3.18
SSSCA1-207ENST00000533115 TRPV6Q9H1D0 765 aa34.9■■■■□ 3.18
SSSCA1-207ENST00000533115 ALDH8A1Q9H2A2 487 aaPredicted RBP34.9■■■■□ 3.18
SSSCA1-207ENST00000533115 CNTNAP5Q8WYK1 1306 aa34.89■■■■□ 3.18
SSSCA1-207ENST00000533115 GOLGA8AA7E2F4 631 aa34.89■■■■□ 3.18
SSSCA1-207ENST00000533115 GOLGA8BA8MQT2 603 aa34.89■■■■□ 3.18
SSSCA1-207ENST00000533115 B4GALT4O60513 344 aa34.89■■■■□ 3.18
SSSCA1-207ENST00000533115 ZFP91Q96JP5 570 aaPredicted RBP34.89■■■■□ 3.18
SSSCA1-207ENST00000533115 PSTPIP2Q9H939 334 aa34.89■■■■□ 3.18
SSSCA1-207ENST00000533115 SCN10AQ9Y5Y9 1956 aa34.89■■■■□ 3.18
SSSCA1-207ENST00000533115 PSMA5P28066 241 aa34.88■■■■□ 3.17
SSSCA1-207ENST00000533115 EPHB4P54760 987 aa34.88■■■■□ 3.17
SSSCA1-207ENST00000533115 LAMC2Q13753 1193 aa34.88■■■■□ 3.17
SSSCA1-207ENST00000533115 NBPF20Q3BBV1 942 aa34.88■■■■□ 3.17
SSSCA1-207ENST00000533115 DHX37Q8IY37 1157 aaKnown RBP34.88■■■■□ 3.17
SSSCA1-207ENST00000533115 PPP1R12CQ9BZL4 782 aa34.88■■■■□ 3.17
SSSCA1-207ENST00000533115 NAP1L2Q9ULW6 460 aaPredicted RBP34.88■■■■□ 3.17
SSSCA1-207ENST00000533115 STAM2O75886 525 aa34.87■■■■□ 3.17
SSSCA1-207ENST00000533115 TGFB3P10600 412 aa34.87■■■■□ 3.17
SSSCA1-207ENST00000533115 RPS6KB1P23443 525 aa34.87■■■■□ 3.17
SSSCA1-207ENST00000533115 FUT2Q10981 343 aa34.87■■■■□ 3.17
SSSCA1-207ENST00000533115 GPR153Q6NV75 609 aa34.87■■■■□ 3.17
SSSCA1-207ENST00000533115 HEATR3Q7Z4Q2 680 aa34.87■■■■□ 3.17
SSSCA1-207ENST00000533115 FAM217BQ9NTX9 383 aaPredicted RBP34.87■■■■□ 3.17
SSSCA1-207ENST00000533115 CASTP20810 708 aaKnown RBP34.86■■■■□ 3.17
SSSCA1-207ENST00000533115 MRPS9P82933 396 aaKnown RBP34.86■■■■□ 3.17
SSSCA1-207ENST00000533115 APOBRQ0VD83 1088 aa34.86■■■■□ 3.17
SSSCA1-207ENST00000533115 NFRKBQ6P4R8 1299 aa34.86■■■■□ 3.17
SSSCA1-207ENST00000533115 GPKOWQ92917 476 aaPredicted RBP eCLIP34.86■■■■□ 3.17
SSSCA1-207ENST00000533115 BRF1Q92994 677 aa34.86■■■■□ 3.17
SSSCA1-207ENST00000533115 CDC27P30260 824 aa34.85■■■■□ 3.17
SSSCA1-207ENST00000533115 DGKDQ16760 1214 aa34.85■■■■□ 3.17
SSSCA1-207ENST00000533115 FBXL16Q8N461 479 aa34.85■■■■□ 3.17
SSSCA1-207ENST00000533115 TMEM199Q8N511 208 aa34.85■■■■□ 3.17
SSSCA1-207ENST00000533115 PPTC7Q8NI37 304 aa34.85■■■■□ 3.17
SSSCA1-207ENST00000533115 USP26Q9BXU7 913 aa34.85■■■■□ 3.17
SSSCA1-207ENST00000533115 HIPK3Q9H422 1215 aa34.85■■■■□ 3.17
SSSCA1-207ENST00000533115 SUPT20HL2P0C7V6 817 aa34.84■■■■□ 3.17
SSSCA1-207ENST00000533115 CYP2C18P33260 490 aa34.84■■■■□ 3.17
SSSCA1-207ENST00000533115 GNPTABQ3T906 1256 aa34.84■■■■□ 3.17
SSSCA1-207ENST00000533115 FAM47CQ5HY64 1035 aa34.84■■■■□ 3.17
SSSCA1-207ENST00000533115 CELF3Q5SZQ8 465 aaKnown RBP34.84■■■■□ 3.17
SSSCA1-207ENST00000533115 MYSM1Q5VVJ2 828 aa34.84■■■■□ 3.17
SSSCA1-207ENST00000533115 INPP4AQ96PE3 977 aaPredicted RBP34.84■■■■□ 3.17
SSSCA1-207ENST00000533115 TRMT13Q9NUP7 481 aaKnown RBP34.84■■■■□ 3.17
SSSCA1-207ENST00000533115 V9GY48 417 aaPredicted RBP34.84■■■■□ 3.17
SSSCA1-207ENST00000533115 GGPS1O95749 300 aa34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 UBA1P22314 1058 aaKnown RBP34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 METAP2P50579 478 aaKnown RBP eCLIP34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 SP2Q02086 613 aa34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 PTPN11Q06124 597 aaPredicted RBP34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 PPIGQ13427 754 aaKnown RBP eCLIP34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 PCNX4Q63HM2 1172 aa34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 WWC2Q6AWC2 1192 aa34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 XRRA1Q6P2D8 792 aa34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 AGXT2Q9BYV1 514 aa34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 MYH7BA7E2Y1 1941 aa34.83■■■■□ 3.17
SSSCA1-207ENST00000533115 CSF2RAP15509 400 aa34.82■■■■□ 3.16
SSSCA1-207ENST00000533115 ICAM3P32942 547 aa34.82■■■■□ 3.16
SSSCA1-207ENST00000533115 PPP1R13LQ8WUF5 828 aa34.82■■■■□ 3.16
SSSCA1-207ENST00000533115 KAT2BQ92831 832 aa34.82■■■■□ 3.16
SSSCA1-207ENST00000533115 NOC4LQ9BVI4 516 aaKnown RBP34.82■■■■□ 3.16
SSSCA1-207ENST00000533115 RTEL1Q9NZ71 1219 aa34.82■■■■□ 3.16
SSSCA1-207ENST00000533115 CCDC196A0A1B0GTZ2 297 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms