RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 ZNF396Q96N95 335 aaPredicted RBP16.27■□□□□ 0.2
COL16A1-217ENST00000532877 USP28Q96RU2 1077 aa16.27■□□□□ 0.2
COL16A1-217ENST00000532877 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.2
COL16A1-217ENST00000532877 ADD3Q9UEY8 706 aaKnown RBP16.27■□□□□ 0.2
COL16A1-217ENST00000532877 PCDHB6Q9Y5E3 794 aa16.27■□□□□ 0.2
COL16A1-217ENST00000532877 CUL9Q8IWT3 2517 aa16.27■□□□□ 0.2
COL16A1-217ENST00000532877 MCM3APO60318 1980 aa16.26■□□□□ 0.19
COL16A1-217ENST00000532877 TDP2O95551 362 aa16.26■□□□□ 0.19
COL16A1-217ENST00000532877 CYP3A4P08684 503 aa16.26■□□□□ 0.19
COL16A1-217ENST00000532877 USP11P51784 963 aa16.26■□□□□ 0.19
COL16A1-217ENST00000532877 KIF22Q14807 665 aa16.26■□□□□ 0.19
COL16A1-217ENST00000532877 ZNF792Q3KQV3 632 aa16.26■□□□□ 0.19
COL16A1-217ENST00000532877 PCNX4Q63HM2 1172 aa16.26■□□□□ 0.19
COL16A1-217ENST00000532877 ATL3Q6DD88 541 aa16.26■□□□□ 0.19
COL16A1-217ENST00000532877 SOCS4Q8WXH5 440 aa16.26■□□□□ 0.19
COL16A1-217ENST00000532877 CCNT1O60563 726 aaKnown RBP16.25■□□□□ 0.19
COL16A1-217ENST00000532877 NR3C2P08235 984 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 GCFC2P16383 781 aaKnown RBP16.25■□□□□ 0.19
COL16A1-217ENST00000532877 NCLP19338 710 aaKnown RBP16.25■□□□□ 0.19
COL16A1-217ENST00000532877 EDNRBP24530 442 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 CCND2P30279 289 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 CIITAP33076 1130 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 KRT85P78386 507 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 CEBPZQ03701 1054 aaKnown RBP16.25■□□□□ 0.19
COL16A1-217ENST00000532877 MAP2K5Q13163 448 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 ANO1Q5XXA6 986 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 MOXD1Q6UVY6 613 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 DPP9Q86TI2 863 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 USP6NLQ92738 828 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 IWS1Q96ST2 819 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 NUDT12Q9BQG2 462 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.25■□□□□ 0.19
COL16A1-217ENST00000532877 POLR3EQ9NVU0 708 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 TFIP11Q9UBB9 837 aaKnown RBP16.25■□□□□ 0.19
COL16A1-217ENST00000532877 CLIC4Q9Y696 253 aa16.25■□□□□ 0.19
COL16A1-217ENST00000532877 DDX49Q9Y6V7 483 aaKnown RBP16.25■□□□□ 0.19
COL16A1-217ENST00000532877 CYP3A7-CYP3A51PA0A087WV96 503 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 FAM86B1E9PN63 330 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 SLC37A4O43826 429 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 BAG4O95429 457 aaKnown RBP16.24■□□□□ 0.19
COL16A1-217ENST00000532877 FAM86B2P0C5J1 330 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 MYCLP12524 364 aaPredicted RBP16.24■□□□□ 0.19
COL16A1-217ENST00000532877 CYP3A7P24462 503 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 MCM7P33993 719 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 RGS2P41220 211 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
COL16A1-217ENST00000532877 MRPS9P82933 396 aaKnown RBP16.24■□□□□ 0.19
COL16A1-217ENST00000532877 ORC2Q13416 577 aaPredicted RBP16.24■□□□□ 0.19
COL16A1-217ENST00000532877 SF3A1Q15459 793 aaKnown RBP16.24■□□□□ 0.19
COL16A1-217ENST00000532877 ZNF174Q15697 407 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 PPP4R3AQ6IN85 833 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 XRRA1Q6P2D8 792 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 CLEC17AQ6ZS10 378 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 ZNF467Q7Z7K2 595 aaPredicted RBP16.24■□□□□ 0.19
COL16A1-217ENST00000532877 MAML3Q96JK9 1138 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 MBOAT7Q96N66 472 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 NAP1L4Q99733 375 aaKnown RBP16.24■□□□□ 0.19
COL16A1-217ENST00000532877 APBA2Q99767 749 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 PRO3102Q9H379 93 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 RTEL1Q9NZ71 1219 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 GJD2Q9UKL4 321 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 CNPY2Q9Y2B0 182 aa16.24■□□□□ 0.19
COL16A1-217ENST00000532877 DIS3Q9Y2L1 958 aaKnown RBP16.24■□□□□ 0.19
COL16A1-217ENST00000532877 IGLV3-22A0A075B6J6 115 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 LOC102724159A0A0B4J2E5 919 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 FIBPO43427 364 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 NEMFO60524 1076 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 HOXC6P09630 235 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 ZNF76P36508 570 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 PTPAQ15257 358 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 PWP2Q15269 919 aaKnown RBP16.23■□□□□ 0.19
COL16A1-217ENST00000532877 CEP55Q53EZ4 464 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 VSIG10LQ86VR7 867 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 POTEDQ86YR6 584 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 NPLOC4Q8TAT6 608 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 LENG9Q96B70 501 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 ZFP91Q96JP5 570 aaPredicted RBP16.23■□□□□ 0.19
COL16A1-217ENST00000532877 MPHOSPH6Q99547 160 aaKnown RBP16.23■□□□□ 0.19
COL16A1-217ENST00000532877 DDX25Q9UHL0 483 aaKnown RBP16.23■□□□□ 0.19
COL16A1-217ENST00000532877 CFAP45Q9UL16 551 aa16.23■□□□□ 0.19
COL16A1-217ENST00000532877 KIAA1217Q5T5P2 1943 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 ASB14A6NK59 587 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 B4DLN1 442 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 H0YGN5 161 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 YEATS4O95619 227 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 BMP15O95972 392 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 ITGB5P18084 799 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 PDE4DQ08499 809 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 STXBP2Q15833 593 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 Q4G0T1 1027 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 PRR16Q569H4 304 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 LINC00301Q8NCQ3 95 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 CYP2W1Q8TAV3 490 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 MORC4Q8TE76 937 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 MXRA8Q9BRK3 442 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 GABRQQ9UN88 632 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 CEP131Q9UPN4 1083 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 UBIAD1Q9Y5Z9 338 aa16.22■□□□□ 0.19
COL16A1-217ENST00000532877 STAM2O75886 525 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms