RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CASC1Q6TDU7 716 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 FCHSD1Q86WN1 690 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 KAT2BQ92831 832 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 CTAGE1Q96RT6 745 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 IWS1Q96ST2 819 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 MTG1Q9BT17 334 aaPredicted RBP20.64■□□□□ 0.89
SMG1-203ENST00000532700 SPZ1Q9BXG8 430 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 MAF1Q9H063 256 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 HIPK3Q9H422 1215 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 POLR3EQ9NVU0 708 aa20.64■□□□□ 0.89
SMG1-203ENST00000532700 GRXCR1A8MXD5 290 aa20.63■□□□□ 0.89
SMG1-203ENST00000532700 CDC45O75419 566 aa20.63■□□□□ 0.89
SMG1-203ENST00000532700 ZNF365Q70YC5 407 aa20.63■□□□□ 0.89
SMG1-203ENST00000532700 SCLYQ96I15 445 aa20.63■□□□□ 0.89
SMG1-203ENST00000532700 MPHOSPH6Q99547 160 aaKnown RBP20.63■□□□□ 0.89
SMG1-203ENST00000532700 TELO2Q9Y4R8 837 aa20.63■□□□□ 0.89
SMG1-203ENST00000532700 CPA1P15085 419 aa20.62■□□□□ 0.89
SMG1-203ENST00000532700 RASIP1Q5U651 963 aa20.62■□□□□ 0.89
SMG1-203ENST00000532700 NFXL1Q6ZNB6 911 aa20.62■□□□□ 0.89
SMG1-203ENST00000532700 TMEM87BQ96K49 555 aa20.62■□□□□ 0.89
SMG1-203ENST00000532700 MAP3K14Q99558 947 aa20.62■□□□□ 0.89
SMG1-203ENST00000532700 CXXC1Q9P0U4 656 aaPredicted RBP20.62■□□□□ 0.89
SMG1-203ENST00000532700 BRPF3Q9ULD4 1205 aa20.62■□□□□ 0.89
SMG1-203ENST00000532700 PTPRSQ13332 1948 aa20.61■□□□□ 0.89
SMG1-203ENST00000532700 FRMPD4Q14CM0 1322 aa20.61■□□□□ 0.89
SMG1-203ENST00000532700 GCOM1H8Y6P7 765 aaPredicted RBP20.61■□□□□ 0.89
SMG1-203ENST00000532700 EIF3JO75822 258 aaKnown RBP20.61■□□□□ 0.89
SMG1-203ENST00000532700 GH1P01241 217 aa20.61■□□□□ 0.89
SMG1-203ENST00000532700 POLR2MP0CAP2 368 aa20.61■□□□□ 0.89
SMG1-203ENST00000532700 CHMP4BP1P59074 171 aa20.61■□□□□ 0.89
SMG1-203ENST00000532700 MRPS9P82933 396 aaKnown RBP20.61■□□□□ 0.89
SMG1-203ENST00000532700 EXOSC10Q01780 885 aaKnown RBP20.61■□□□□ 0.89
SMG1-203ENST00000532700 FAM47CQ5HY64 1035 aa20.61■□□□□ 0.89
SMG1-203ENST00000532700 USP17L6PQ6QN14 398 aa20.61■□□□□ 0.89
SMG1-203ENST00000532700 VSIG10LQ86VR7 867 aa20.61■□□□□ 0.89
SMG1-203ENST00000532700 CTCFLQ8NI51 663 aaPredicted RBP20.61■□□□□ 0.89
SMG1-203ENST00000532700 MTA3Q9BTC8 594 aa20.61■□□□□ 0.89
SMG1-203ENST00000532700 TRIP12Q14669 1992 aaPredicted RBP20.6■□□□□ 0.89
SMG1-203ENST00000532700 CCDC69A6NI79 296 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 B4DLN1 442 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 ZNF286BP0CG31 522 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 PBX2P40425 430 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 LIFRP42702 1097 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 MRPL12P52815 198 aaKnown RBP20.6■□□□□ 0.89
SMG1-203ENST00000532700 SMAD3P84022 425 aaKnown RBP20.6■□□□□ 0.89
SMG1-203ENST00000532700 SEMA3FQ13275 785 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 PPIGQ13427 754 aaKnown RBP eCLIP20.6■□□□□ 0.896e-7■■□□□ 12
SMG1-203ENST00000532700 MICU3Q86XE3 530 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 CCDC82Q8N4S0 544 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 IL23AQ9NPF7 189 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 PPP4R2Q9NY27 417 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 MRVI1Q9Y6F6 885 aa20.6■□□□□ 0.89
SMG1-203ENST00000532700 MEIS2O14770 477 aa20.59■□□□□ 0.89
SMG1-203ENST00000532700 UBA1P22314 1058 aaKnown RBP20.59■□□□□ 0.89
SMG1-203ENST00000532700 HIC1Q14526 733 aa20.59■□□□□ 0.89
SMG1-203ENST00000532700 TMTC3Q6ZXV5 915 aa20.59■□□□□ 0.89
SMG1-203ENST00000532700 SGMS1Q86VZ5 419 aa20.59■□□□□ 0.89
SMG1-203ENST00000532700 TMEM199Q8N511 208 aa20.59■□□□□ 0.89
SMG1-203ENST00000532700 RRP36Q96EU6 259 aaKnown RBP20.59■□□□□ 0.89
SMG1-203ENST00000532700 NEK1Q96PY6 1258 aa20.59■□□□□ 0.89
SMG1-203ENST00000532700 EYSQ5T1H1 3165 aa20.58■□□□□ 0.89
SMG1-203ENST00000532700 CNTNAP5Q8WYK1 1306 aa20.58■□□□□ 0.89
SMG1-203ENST00000532700 HSDL1Q3SXM5 330 aa20.58■□□□□ 0.89
SMG1-203ENST00000532700 GDF6Q6KF10 455 aaPredicted RBP20.58■□□□□ 0.89
SMG1-203ENST00000532700 APOA5Q6Q788 366 aa20.58■□□□□ 0.89
SMG1-203ENST00000532700 TET1Q8NFU7 2136 aa20.58■□□□□ 0.89
SMG1-203ENST00000532700 EMID1Q96A84 441 aaPredicted RBP20.58■□□□□ 0.89
SMG1-203ENST00000532700 SEMA6BQ9H3T3 888 aa20.58■□□□□ 0.89
SMG1-203ENST00000532700 MAP3K20Q9NYL2 800 aaKnown RBP20.58■□□□□ 0.89
SMG1-203ENST00000532700 GGPS1O95749 300 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 KIF5BP33176 963 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 FUT2Q10981 343 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 UBE2SQ16763 222 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 ZNF697Q5TEC3 545 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 MYSM1Q5VVJ2 828 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 TYW1BQ6NUM6 668 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 NFRKBQ6P4R8 1299 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 FANCBQ8NB91 859 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 DHX38Q92620 1227 aaKnown RBP20.57■□□□□ 0.88
SMG1-203ENST00000532700 FAM217BQ9NTX9 383 aaPredicted RBP20.57■□□□□ 0.88
SMG1-203ENST00000532700 RTEL1Q9NZ71 1219 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 STXBP5LQ9Y2K9 1186 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 SLC12A7Q9Y666 1083 aa20.57■□□□□ 0.88
SMG1-203ENST00000532700 HOXD8P13378 290 aaPredicted RBP20.56■□□□□ 0.88
SMG1-203ENST00000532700 SMARCA1P28370 1054 aa20.56■□□□□ 0.88
SMG1-203ENST00000532700 CCND2P30279 289 aa20.56■□□□□ 0.88
SMG1-203ENST00000532700 TSGA10IPQ3SY00 556 aa20.56■□□□□ 0.88
SMG1-203ENST00000532700 CELF3Q5SZQ8 465 aaKnown RBP20.56■□□□□ 0.88
SMG1-203ENST00000532700 OTOP2Q7RTS6 562 aa20.56■□□□□ 0.88
SMG1-203ENST00000532700 WNT8BQ93098 351 aa20.56■□□□□ 0.88
SMG1-203ENST00000532700 CDX2Q99626 313 aaPredicted RBP20.56■□□□□ 0.88
SMG1-203ENST00000532700 HAS3O00219 553 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 KPNA6O60684 536 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 DNAJB2P25686 324 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 ZNF200P98182 395 aaPredicted RBP20.55■□□□□ 0.88
SMG1-203ENST00000532700 GPNMBQ14956 572 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 BRDTQ58F21 947 aaPredicted RBP20.55■□□□□ 0.88
SMG1-203ENST00000532700 DHX37Q8IY37 1157 aaKnown RBP20.55■□□□□ 0.88
SMG1-203ENST00000532700 TMTC2Q8N394 836 aa20.55■□□□□ 0.88
SMG1-203ENST00000532700 SAMD3Q8N6K7 520 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms