RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 PSRC1Q6PGN9 363 aaPredicted RBP17.99■□□□□ 0.47
CTSB-220ENST00000531089 PBX4Q9BYU1 374 aa17.99■□□□□ 0.47
CTSB-220ENST00000531089 ZNF576Q9H609 170 aa17.99■□□□□ 0.47
CTSB-220ENST00000531089 VCANP13611 3396 aa17.99■□□□□ 0.47
CTSB-220ENST00000531089 REC8O95072 547 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 CFBP00751 764 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 NR3C2P08235 984 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 SUPT20HL2P0C7V6 817 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 TROAPQ12815 778 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 KRT32Q14532 448 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 GRM4Q14833 912 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 TSGA10IPQ3SY00 556 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 NFRKBQ6P4R8 1299 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 TET1Q8NFU7 2136 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 SCLYQ96I15 445 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 NEK1Q96PY6 1258 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 MAP3K20Q9NYL2 800 aaKnown RBP17.98■□□□□ 0.47
CTSB-220ENST00000531089 CHD7Q9P2D1 2997 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 DDX41Q9UJV9 622 aaKnown RBP17.98■□□□□ 0.47
CTSB-220ENST00000531089 CUL9Q8IWT3 2517 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 GBF1Q92538 1859 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 CYTH3O43739 400 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 EIF3JO75822 258 aaKnown RBP17.98■□□□□ 0.47
CTSB-220ENST00000531089 ARHGAP1Q07960 439 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 ARHGEF16Q5VV41 709 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 NFXL1Q6ZNB6 911 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 OTOP2Q7RTS6 562 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 RPUSD2Q8IZ73 545 aaKnown RBP17.98■□□□□ 0.47
CTSB-220ENST00000531089 AFG1LQ8WV93 481 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 TIFAQ96CG3 184 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 LY9Q9HBG7 655 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 PXMP2Q9NR77 195 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 PCDHA1Q9Y5I3 950 aa17.98■□□□□ 0.47
CTSB-220ENST00000531089 CCDC69A6NI79 296 aa17.97■□□□□ 0.47
CTSB-220ENST00000531089 EIF2AK2P19525 551 aaKnown RBP17.97■□□□□ 0.47
CTSB-220ENST00000531089 LIFRP42702 1097 aa17.97■□□□□ 0.47
CTSB-220ENST00000531089 PTPN11Q06124 597 aaPredicted RBP17.97■□□□□ 0.47
CTSB-220ENST00000531089 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.97■□□□□ 0.47
CTSB-220ENST00000531089 SAMD3Q8N6K7 520 aa17.97■□□□□ 0.47
CTSB-220ENST00000531089 KAT2BQ92831 832 aa17.97■□□□□ 0.47
CTSB-220ENST00000531089 PIGSQ96S52 555 aa17.97■□□□□ 0.47
CTSB-220ENST00000531089 MAP3K14Q99558 947 aa17.97■□□□□ 0.47
CTSB-220ENST00000531089 RGS20O76081 388 aa17.96■□□□□ 0.47
CTSB-220ENST00000531089 GH1P01241 217 aa17.96■□□□□ 0.47
CTSB-220ENST00000531089 VSIG10LQ86VR7 867 aa17.96■□□□□ 0.47
CTSB-220ENST00000531089 RASEFQ8IZ41 740 aa17.96■□□□□ 0.47
CTSB-220ENST00000531089 ZNF654Q8IZM8 581 aa17.96■□□□□ 0.47
CTSB-220ENST00000531089 MAFAQ8NHW3 353 aaPredicted RBP17.96■□□□□ 0.47
CTSB-220ENST00000531089 CTCFLQ8NI51 663 aaPredicted RBP17.96■□□□□ 0.47
CTSB-220ENST00000531089 SH2B2O14492 632 aaPredicted RBP17.95■□□□□ 0.46
CTSB-220ENST00000531089 MMP3P08254 477 aa17.95■□□□□ 0.46
CTSB-220ENST00000531089 HMGB1P09429 215 aaKnown RBP17.95■□□□□ 0.46
CTSB-220ENST00000531089 KIF5BP33176 963 aa17.95■□□□□ 0.46
CTSB-220ENST00000531089 FAM47CQ5HY64 1035 aa17.95■□□□□ 0.46
CTSB-220ENST00000531089 DHX32Q7L7V1 743 aaKnown RBP17.95■□□□□ 0.46
CTSB-220ENST00000531089 CTAGE1Q96RT6 745 aa17.95■□□□□ 0.46
CTSB-220ENST00000531089 PDCD2LQ9BRP1 358 aa17.95■□□□□ 0.46
CTSB-220ENST00000531089 PNMA6FA0A0J9YX94 578 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 DDAH1O94760 285 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 CALM1P0DP23 149 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 CALM2P0DP24 149 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 CALM3P0DP25 149 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 FOSL2P15408 326 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 CASTP20810 708 aaKnown RBP17.94■□□□□ 0.46
CTSB-220ENST00000531089 HOXA13P31271 388 aaPredicted RBP17.94■□□□□ 0.46
CTSB-220ENST00000531089 HSPA4P34932 840 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 TRAF1Q13077 416 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 SYNE3Q6ZMZ3 975 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 HOMER1Q86YM7 354 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 EMID1Q96A84 441 aaPredicted RBP17.94■□□□□ 0.46
CTSB-220ENST00000531089 LRRC2Q9BYS8 371 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 SLC12A7Q9Y666 1083 aa17.94■□□□□ 0.46
CTSB-220ENST00000531089 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
CTSB-220ENST00000531089 IQCF3P0C7M6 154 aa17.93■□□□□ 0.46
CTSB-220ENST00000531089 MYCLP12524 364 aaPredicted RBP17.93■□□□□ 0.46
CTSB-220ENST00000531089 GNAQP50148 359 aa17.93■□□□□ 0.46
CTSB-220ENST00000531089 EXOSC10Q01780 885 aaKnown RBP17.93■□□□□ 0.46
CTSB-220ENST00000531089 SP2Q02086 613 aa17.93■□□□□ 0.46
CTSB-220ENST00000531089 COL9A3Q14050 684 aaPredicted RBP17.93■□□□□ 0.46
CTSB-220ENST00000531089 ADCK5Q3MIX3 580 aa17.93■□□□□ 0.46
CTSB-220ENST00000531089 KCNB2Q92953 911 aa17.93■□□□□ 0.46
CTSB-220ENST00000531089 MYL10Q9BUA6 226 aa17.93■□□□□ 0.46
CTSB-220ENST00000531089 MTIF3Q9H2K0 278 aaKnown RBP17.93■□□□□ 0.46
CTSB-220ENST00000531089 PITPNM1O00562 1244 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 SMARCA1P28370 1054 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 LAMC2Q13753 1193 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 PGM5Q15124 567 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 DGKDQ16760 1214 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 MYSM1Q5VVJ2 828 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 GDF6Q6KF10 455 aaPredicted RBP17.92■□□□□ 0.46
CTSB-220ENST00000531089 DEFB128Q7Z7B8 93 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 SESTD1Q86VW0 696 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 ZFP91Q96JP5 570 aaPredicted RBP17.92■□□□□ 0.46
CTSB-220ENST00000531089 LZTS2Q9BRK4 669 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 COL25A1Q9BXS0 654 aaPredicted RBP17.92■□□□□ 0.46
CTSB-220ENST00000531089 MSRAQ9UJ68 235 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 YBX2Q9Y2T7 364 aaKnown RBP17.92■□□□□ 0.46
CTSB-220ENST00000531089 MRVI1Q9Y6F6 885 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 SLC4A7Q9Y6M7 1214 aa17.92■□□□□ 0.46
CTSB-220ENST00000531089 REV3LO60673 3130 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms