RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 PGM5Q15124 567 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 SHHQ15465 462 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 LY6KQ17RY6 165 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 XRRA1Q6P2D8 792 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 RASEFQ8IZ41 740 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 SMARCC2Q8TAQ2 1214 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 COPS5Q92905 334 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
CAPN1-221ENST00000531068 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-221ENST00000531068 DDX41Q9UJV9 622 aaKnown RBP12.66□□□□□ -0.38
CAPN1-221ENST00000531068 GRIN2DO15399 1336 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 PIK3CDO00329 1044 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 ZBTB43O43298 467 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 STAM2O75886 525 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 ARIH2O95376 493 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 PLEKHA8P1O95397 391 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 PSMA5P28066 241 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 RCAN1P53805 252 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 ANAPC15P60006 121 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 PTPN11Q06124 597 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-221ENST00000531068 BECN1Q14457 450 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 DGKDQ16760 1214 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 ADCK5Q3MIX3 580 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 NFRKBQ6P4R8 1299 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 APOA5Q6Q788 366 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 TMTC3Q6ZXV5 915 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 MICU3Q86XE3 530 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 DHX37Q8IY37 1157 aaKnown RBP12.65□□□□□ -0.38
CAPN1-221ENST00000531068 AFG1LQ8WV93 481 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 EMID1Q96A84 441 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-221ENST00000531068 ALDH8A1Q9H2A2 487 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-221ENST00000531068 HIPK3Q9H422 1215 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 PSTPIP2Q9H939 334 aa12.65□□□□□ -0.38
CAPN1-221ENST00000531068 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
CAPN1-221ENST00000531068 B4GALT4O60513 344 aa12.64□□□□□ -0.39
CAPN1-221ENST00000531068 PPFIA4O75335 1185 aa12.64□□□□□ -0.39
CAPN1-221ENST00000531068 RXRAP19793 462 aa12.64□□□□□ -0.39
CAPN1-221ENST00000531068 NBPF20Q3BBV1 942 aa12.64□□□□□ -0.39
CAPN1-221ENST00000531068 GNPTABQ3T906 1256 aa12.64□□□□□ -0.39
CAPN1-221ENST00000531068 CMTR1Q8N1G2 835 aaKnown RBP12.64□□□□□ -0.39
CAPN1-221ENST00000531068 CCDC82Q8N4S0 544 aa12.64□□□□□ -0.39
CAPN1-221ENST00000531068 TRPV6Q9H1D0 765 aa12.64□□□□□ -0.39
CAPN1-221ENST00000531068 ZNFX1Q9P2E3 1918 aaKnown RBP12.63□□□□□ -0.39
CAPN1-221ENST00000531068 KLF18A0A0U1RQI7 1052 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 MMP3P08254 477 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 ARHGAP1Q07960 439 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 COL9A3Q14050 684 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-221ENST00000531068 RTN1Q16799 776 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 FAM47CQ5HY64 1035 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 C9orf50Q5SZB4 431 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 CELF3Q5SZQ8 465 aaKnown RBP12.63□□□□□ -0.39
CAPN1-221ENST00000531068 FAM109BQ6ICB4 259 aaPredicted RBP12.63□□□□□ -0.39
CAPN1-221ENST00000531068 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 NLRX1Q86UT6 975 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 RAB11FIP4Q86YS3 637 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 PPTC7Q8NI37 304 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 RNPC3Q96LT9 517 aaKnown RBP12.63□□□□□ -0.39
CAPN1-221ENST00000531068 JAKMIP1Q96N16 626 aaKnown RBP12.63□□□□□ -0.39
CAPN1-221ENST00000531068 PPP1R12CQ9BZL4 782 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 MLXIPQ9HAP2 919 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 BRPF3Q9ULD4 1205 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 SNX14Q9Y5W7 946 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 TRIOBPQ9H2D6 2365 aa12.63□□□□□ -0.39
CAPN1-221ENST00000531068 MEIS2O14770 477 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 RGS20O76081 388 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 CSF2RAP15509 400 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 CYP2C18P33260 490 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 EPHB4P54760 987 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 SMAD3P84022 425 aaKnown RBP12.62□□□□□ -0.39
CAPN1-221ENST00000531068 NEDD9Q14511 834 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 MYSM1Q5VVJ2 828 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 PSRC1Q6PGN9 363 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-221ENST00000531068 USP17L6PQ6QN14 398 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 RPUSD2Q8IZ73 545 aaKnown RBP12.62□□□□□ -0.39
CAPN1-221ENST00000531068 FBXL16Q8N461 479 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 DEFB123Q8N688 67 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 RETREG2Q8NC44 543 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 SNX21Q969T3 373 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 TCEANC2Q96MN5 208 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 INPP4AQ96PE3 977 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-221ENST00000531068 NOC4LQ9BVI4 516 aaKnown RBP12.62□□□□□ -0.39
CAPN1-221ENST00000531068 KATNAL1Q9BW62 490 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 GLT8D2Q9H1C3 349 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 MTIF3Q9H2K0 278 aaKnown RBP12.62□□□□□ -0.39
CAPN1-221ENST00000531068 EHMT1Q9H9B1 1298 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 NAP1L2Q9ULW6 460 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-221ENST00000531068 NOD1Q9Y239 953 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 V9GY48 417 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-221ENST00000531068 RANBP2P49792 3224 aaKnown RBP12.62□□□□□ -0.39
CAPN1-221ENST00000531068 LAMA4Q16363 1823 aa12.62□□□□□ -0.39
CAPN1-221ENST00000531068 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-221ENST00000531068 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-221ENST00000531068 SPDYE3A6NKU9 549 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 GOLGA8AA7E2F4 631 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 GOLGA8BA8MQT2 603 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 SPATA31C2B4DYI2 1134 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 hCG_1984214I3L0E3 225 aa12.61□□□□□ -0.39
CAPN1-221ENST00000531068 FIBPO43427 364 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms