RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 TRIM29Q14134 588 aa24.38■■□□□ 1.49
CAPN1-220ENST00000530567 MCTP2Q6DN12 878 aa24.38■■□□□ 1.49
CAPN1-220ENST00000530567 TNFRSF25Q93038 417 aa24.38■■□□□ 1.49
CAPN1-220ENST00000530567 FRMPD3Q5JV73 1810 aa24.38■■□□□ 1.49
CAPN1-220ENST00000530567 RBM47A0AV96 593 aaKnown RBP24.37■■□□□ 1.49
CAPN1-220ENST00000530567 EIF3JO75822 258 aaKnown RBP24.37■■□□□ 1.49
CAPN1-220ENST00000530567 NR5A1Q13285 461 aa24.37■■□□□ 1.49
CAPN1-220ENST00000530567 CCDC144BQ3MJ40 725 aa24.37■■□□□ 1.49
CAPN1-220ENST00000530567 XRRA1Q6P2D8 792 aa24.37■■□□□ 1.49
CAPN1-220ENST00000530567 RNF208Q9H0X6 261 aa24.37■■□□□ 1.49
CAPN1-220ENST00000530567 EHMT1Q9H9B1 1298 aa24.37■■□□□ 1.49
CAPN1-220ENST00000530567 KIAA0100Q14667 2235 aaKnown RBP24.36■■□□□ 1.49
CAPN1-220ENST00000530567 EDIL3O43854 480 aa24.36■■□□□ 1.49
CAPN1-220ENST00000530567 KRT2P35908 639 aa24.36■■□□□ 1.49
CAPN1-220ENST00000530567 ARHGAP4P98171 946 aa24.36■■□□□ 1.49
CAPN1-220ENST00000530567 DIS3L2Q8IYB7 885 aaKnown RBP24.36■■□□□ 1.49
CAPN1-220ENST00000530567 INPP4AQ96PE3 977 aaPredicted RBP24.36■■□□□ 1.49
CAPN1-220ENST00000530567 FOXD4L1Q9NU39 408 aa24.36■■□□□ 1.49
CAPN1-220ENST00000530567 KIF3AQ9Y496 699 aa24.36■■□□□ 1.49
CAPN1-220ENST00000530567 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.35■■□□□ 1.49
CAPN1-220ENST00000530567 BTBD18B2RXH4 712 aa24.35■■□□□ 1.49
CAPN1-220ENST00000530567 AKR1A1P14550 325 aa24.35■■□□□ 1.49
CAPN1-220ENST00000530567 CNGA1P29973 690 aa24.35■■□□□ 1.49
CAPN1-220ENST00000530567 ADCYAP1R1P41586 468 aa24.35■■□□□ 1.49
CAPN1-220ENST00000530567 EARS2Q5JPH6 523 aaKnown RBP24.35■■□□□ 1.49
CAPN1-220ENST00000530567 TMEM63BQ5T3F8 832 aa24.35■■□□□ 1.49
CAPN1-220ENST00000530567 LHX8Q68G74 356 aa24.35■■□□□ 1.49
CAPN1-220ENST00000530567 LENG1Q96BZ8 264 aaPredicted RBP24.35■■□□□ 1.49
CAPN1-220ENST00000530567 DDX20Q9UHI6 824 aaKnown RBP24.35■■□□□ 1.49
CAPN1-220ENST00000530567 FAM184BQ9ULE4 1060 aa24.35■■□□□ 1.49
CAPN1-220ENST00000530567 FAM205CA6NFA0 338 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 STAM2O75886 525 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 ARIH2O95376 493 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 GJB1P08034 283 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 CYP3A4P08684 503 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 ITGB5P18084 799 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 PTGS1P23219 599 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 ANO1Q5XXA6 986 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 CCDC62Q6P9F0 684 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 SEPT14Q6ZU15 432 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 KRT25Q7Z3Z0 450 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 DEFB118Q96PH6 123 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 BRMS1Q9HCU9 246 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 RTEL1Q9NZ71 1219 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 UBIAD1Q9Y5Z9 338 aa24.34■■□□□ 1.49
CAPN1-220ENST00000530567 SMPD1P17405 629 aa24.33■■□□□ 1.49
CAPN1-220ENST00000530567 SEMA3FQ13275 785 aa24.33■■□□□ 1.49
CAPN1-220ENST00000530567 IQSEC1Q6DN90 963 aa24.33■■□□□ 1.49
CAPN1-220ENST00000530567 TBCKQ8TEA7 893 aa24.33■■□□□ 1.49
CAPN1-220ENST00000530567 SCFD2Q8WU76 684 aa24.33■■□□□ 1.49
CAPN1-220ENST00000530567 GNEQ9Y223 722 aaKnown RBP24.33■■□□□ 1.49
CAPN1-220ENST00000530567 MSCO60682 206 aa24.32■■□□□ 1.48
CAPN1-220ENST00000530567 NONOQ15233 471 aaKnown RBP eCLIP24.32■■□□□ 1.48
CAPN1-220ENST00000530567 GJC2Q5T442 439 aaPredicted RBP24.32■■□□□ 1.48
CAPN1-220ENST00000530567 CYP2W1Q8TAV3 490 aa24.32■■□□□ 1.48
CAPN1-220ENST00000530567 WDR11Q9BZH6 1224 aa24.32■■□□□ 1.48
CAPN1-220ENST00000530567 CRISPLD2Q9H0B8 497 aa24.32■■□□□ 1.48
CAPN1-220ENST00000530567 KIF28PB7ZC32 967 aa24.31■■□□□ 1.48
CAPN1-220ENST00000530567 FAM86B1E9PN63 330 aa24.31■■□□□ 1.48
CAPN1-220ENST00000530567 FAM86B2P0C5J1 330 aa24.31■■□□□ 1.48
CAPN1-220ENST00000530567 ICAM3P32942 547 aa24.31■■□□□ 1.48
CAPN1-220ENST00000530567 TNFAIP2Q03169 654 aa24.31■■□□□ 1.48
CAPN1-220ENST00000530567 SAFBQ15424 915 aaKnown RBP eCLIP24.31■■□□□ 1.48
CAPN1-220ENST00000530567 DUSP28Q4G0W2 176 aa24.31■■□□□ 1.48
CAPN1-220ENST00000530567 PIK3AP1Q6ZUJ8 805 aa24.31■■□□□ 1.48
CAPN1-220ENST00000530567 U2AF1L4Q8WU68 220 aaKnown RBP24.31■■□□□ 1.48
CAPN1-220ENST00000530567 CCDC194A0A1B0GVG4 234 aa24.3■■□□□ 1.48
CAPN1-220ENST00000530567 POTEFA5A3E0 1075 aa24.3■■□□□ 1.48
CAPN1-220ENST00000530567 CIITAP33076 1130 aa24.3■■□□□ 1.48
CAPN1-220ENST00000530567 GJA8P48165 433 aa24.3■■□□□ 1.48
CAPN1-220ENST00000530567 TTLL4Q14679 1199 aa24.3■■□□□ 1.48
CAPN1-220ENST00000530567 INF2Q27J81 1249 aa24.3■■□□□ 1.48
CAPN1-220ENST00000530567 CEP55Q53EZ4 464 aa24.3■■□□□ 1.48
CAPN1-220ENST00000530567 LARP1BQ659C4 914 aaKnown RBP24.3■■□□□ 1.48
CAPN1-220ENST00000530567 MXRA8Q9BRK3 442 aa24.3■■□□□ 1.48
CAPN1-220ENST00000530567 FOXP1Q9H334 677 aaPredicted RBP24.3■■□□□ 1.48
CAPN1-220ENST00000530567 JADE2Q9NQC1 790 aa24.3■■□□□ 1.48
CAPN1-220ENST00000530567 DDX41Q9UJV9 622 aaKnown RBP24.3■■□□□ 1.48
CAPN1-220ENST00000530567 IGLV3-22A0A075B6J6 115 aa24.29■■□□□ 1.48
CAPN1-220ENST00000530567 SPATA31C2B4DYI2 1134 aa24.29■■□□□ 1.48
CAPN1-220ENST00000530567 DUSP11O75319 330 aaKnown RBP24.29■■□□□ 1.48
CAPN1-220ENST00000530567 SGPL1O95470 568 aa24.29■■□□□ 1.48
CAPN1-220ENST00000530567 RARBP10826 455 aa24.29■■□□□ 1.48
CAPN1-220ENST00000530567 GNPTABQ3T906 1256 aa24.29■■□□□ 1.48
CAPN1-220ENST00000530567 GPRASP2Q96D09 838 aa24.29■■□□□ 1.48
CAPN1-220ENST00000530567 OGDHLQ9ULD0 1010 aa24.29■■□□□ 1.48
CAPN1-220ENST00000530567 MRVI1Q9Y6F6 885 aa24.29■■□□□ 1.48
CAPN1-220ENST00000530567 MEIS1O00470 390 aa24.28■■□□□ 1.48
CAPN1-220ENST00000530567 FIBPO43427 364 aa24.28■■□□□ 1.48
CAPN1-220ENST00000530567 TXNP10599 105 aaKnown RBP24.28■■□□□ 1.48
CAPN1-220ENST00000530567 U2AF2P26368 475 aaKnown RBP eCLIP24.28■■□□□ 1.48
CAPN1-220ENST00000530567 USP11P51784 963 aa24.28■■□□□ 1.48
CAPN1-220ENST00000530567 SP2Q02086 613 aa24.28■■□□□ 1.48
CAPN1-220ENST00000530567 LY6KQ17RY6 165 aa24.28■■□□□ 1.48
CAPN1-220ENST00000530567 COPS5Q92905 334 aa24.28■■□□□ 1.48
CAPN1-220ENST00000530567 LENG9Q96B70 501 aa24.28■■□□□ 1.48
CAPN1-220ENST00000530567 TMEM106CQ9BVX2 250 aa24.28■■□□□ 1.48
CAPN1-220ENST00000530567 SYNRGQ9UMZ2 1314 aa24.28■■□□□ 1.48
CAPN1-220ENST00000530567 ADAMTS4O75173 837 aa24.27■■□□□ 1.48
CAPN1-220ENST00000530567 SYT1P21579 422 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms