RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 HIC1Q14526 733 aa12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 LY6KQ17RY6 165 aa12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 RGS22Q8NE09 1264 aa12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 MRPL38Q96DV4 380 aaKnown RBP12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 KCNH6Q9H252 994 aa12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 HDAC6Q9UBN7 1215 aa12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 GTF2IRD1Q9UHL9 959 aa12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 MTMR7Q9Y216 660 aa12.59□□□□□ -0.39
TM9SF1-210ENST00000530563 ZFHX2Q9C0A1 2572 aaPredicted RBP12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 H3BQ06 376 aaPredicted RBP12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 HAS3O00219 553 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 DCXO43602 365 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 ORC4O43929 436 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 SSTR3P32745 418 aaPredicted RBP12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 CHMP4BP1P59074 171 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 ZP2Q05996 745 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 IKBKEQ14164 716 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 PUS10Q3MIT2 529 aaKnown RBP12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 ZNF618Q5T7W0 954 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 FBXO22Q8NEZ5 403 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 TBC1D5Q92609 795 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 UIMC1Q96RL1 719 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 TMEM47Q9BQJ4 181 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 DCTPP1Q9H773 170 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 GPCPD1Q9NPB8 672 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 INSL6Q9Y581 213 aa12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 FRMPD2Q68DX3 1309 aaPredicted RBP12.58□□□□□ -0.4
TM9SF1-210ENST00000530563 VPS13AQ96RL7 3174 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 RANBP6O60518 1105 aaKnown RBP12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 EFCAB14O75071 495 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 SNHG28P0DPA3 235 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 PDHBP11177 359 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 LTBRP36941 435 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 ZNF200P98182 395 aaPredicted RBP12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 HNRNPUQ00839 825 aaKnown RBP eCLIP12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 PTK7Q13308 1070 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 HFE2Q6ZVN8 426 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 PI4K2BQ8TCG2 481 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 TCP11L1Q9NUJ3 509 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 COL20A1Q9P218 1284 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 WDR19Q8NEZ3 1342 aa12.57□□□□□ -0.4
TM9SF1-210ENST00000530563 MYO7AQ13402 2215 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 H3BNC9 293 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 GH1P01241 217 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 TOP1P11387 765 aaKnown RBP12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 HOXD8P13378 290 aaPredicted RBP12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 PSEN2P49810 448 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 ZNF543Q08ER8 600 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 EPC2Q52LR7 807 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 VPS53Q5VIR6 699 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 DBF4BQ8NFT6 615 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 EMID1Q96A84 441 aaPredicted RBP12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 PABPC5Q96DU9 382 aaKnown RBP12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 SNX27Q96L92 541 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 OSBPL7Q9BZF2 842 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 PRKAG3Q9UGI9 489 aa12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 DDX41Q9UJV9 622 aaKnown RBP12.56□□□□□ -0.4
TM9SF1-210ENST00000530563 LGR5O75473 907 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 F2P00734 622 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 CASTP20810 708 aaKnown RBP12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 ALX1Q15699 326 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 CSPP1Q1MSJ5 1256 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 TCEAL5Q5H9L2 206 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 C20orf194Q5TEA3 1177 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 C7orf31Q8N865 590 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 BANK1Q8NDB2 785 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 SYTL5Q8TDW5 730 aaPredicted RBP12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 TAAR1Q96RJ0 339 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 PHOX2BQ99453 314 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 CTNNA3Q9UI47 895 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 PNMA2Q9UL42 364 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 SPTBN4Q9H254 2564 aa12.55□□□□□ -0.4
TM9SF1-210ENST00000530563 LINC00271P0C7V0 271 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 IRS1P35568 1242 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 DGKDQ16760 1214 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 CTC1Q2NKJ3 1217 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 PLEKHG4Q58EX7 1191 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 SEPT14Q6ZU15 432 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 CHST3Q7LGC8 479 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 SERINC5Q86VE9 423 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 ADHFE1Q8IWW8 467 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 OTUD7AQ8TE49 926 aaPredicted RBP12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 GPATCH3Q96I76 525 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 MPHOSPH6Q99547 160 aaKnown RBP12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 MAF1Q9H063 256 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 CPVLQ9H3G5 476 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 TECTAO75443 2155 aa12.54□□□□□ -0.4
TM9SF1-210ENST00000530563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 B4DLN1 442 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 RGS20O76081 388 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 ZNF286BP0CG31 522 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 HOXC8P31273 242 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 MRPL12P52815 198 aaKnown RBP12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 GPM6BQ13491 265 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 MFSD10Q14728 455 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 PTPROQ16827 1216 aa12.53□□□□□ -0.4
TM9SF1-210ENST00000530563 KIAA0753Q2KHM9 967 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms