RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 ARHGAP1Q07960 439 aa21.73■■□□□ 1.07
PCNX3-203ENST00000530174 C9orf50Q5SZB4 431 aa21.73■■□□□ 1.07
PCNX3-203ENST00000530174 VSIG10LQ86VR7 867 aa21.73■■□□□ 1.07
PCNX3-203ENST00000530174 CCDC82Q8N4S0 544 aa21.73■■□□□ 1.07
PCNX3-203ENST00000530174 MTG1Q9BT17 334 aaPredicted RBP21.73■■□□□ 1.07
PCNX3-203ENST00000530174 SEZ6LQ9BYH1 1024 aa21.73■■□□□ 1.07
PCNX3-203ENST00000530174 hCG_1642624A0A1W2PR95 340 aa21.72■■□□□ 1.07
PCNX3-203ENST00000530174 RGS20O76081 388 aa21.72■■□□□ 1.07
PCNX3-203ENST00000530174 CPA1P15085 419 aa21.72■■□□□ 1.07
PCNX3-203ENST00000530174 CCND2P30279 289 aa21.72■■□□□ 1.07
PCNX3-203ENST00000530174 SHHQ15465 462 aa21.72■■□□□ 1.07
PCNX3-203ENST00000530174 AFG1LQ8WV93 481 aa21.72■■□□□ 1.07
PCNX3-203ENST00000530174 JAKMIP1Q96N16 626 aaKnown RBP21.72■■□□□ 1.07
PCNX3-203ENST00000530174 DDX41Q9UJV9 622 aaKnown RBP21.72■■□□□ 1.07
PCNX3-203ENST00000530174 MRVI1Q9Y6F6 885 aa21.72■■□□□ 1.07
PCNX3-203ENST00000530174 FRMPD4Q14CM0 1322 aa21.72■■□□□ 1.07
PCNX3-203ENST00000530174 SCN10AQ9Y5Y9 1956 aa21.72■■□□□ 1.07
PCNX3-203ENST00000530174 ZBTB43O43298 467 aa21.71■■□□□ 1.07
PCNX3-203ENST00000530174 B4GALT4O60513 344 aa21.71■■□□□ 1.07
PCNX3-203ENST00000530174 KPNA6O60684 536 aa21.71■■□□□ 1.07
PCNX3-203ENST00000530174 CENPBP07199 599 aaPredicted RBP21.71■■□□□ 1.07
PCNX3-203ENST00000530174 EPHB4P54760 987 aa21.71■■□□□ 1.07
PCNX3-203ENST00000530174 FPGSQ05932 587 aa21.71■■□□□ 1.07
PCNX3-203ENST00000530174 PPP1R12CQ9BZL4 782 aa21.71■■□□□ 1.07
PCNX3-203ENST00000530174 TRPV6Q9H1D0 765 aa21.71■■□□□ 1.07
PCNX3-203ENST00000530174 RBM28Q9NW13 759 aaKnown RBP21.71■■□□□ 1.07
PCNX3-203ENST00000530174 KLF18A0A0U1RQI7 1052 aa21.7■■□□□ 1.06
PCNX3-203ENST00000530174 MMP3P08254 477 aa21.7■■□□□ 1.06
PCNX3-203ENST00000530174 RTN1Q16799 776 aa21.7■■□□□ 1.06
PCNX3-203ENST00000530174 USP17L6PQ6QN14 398 aa21.7■■□□□ 1.06
PCNX3-203ENST00000530174 SMARCC2Q8TAQ2 1214 aa21.7■■□□□ 1.06
PCNX3-203ENST00000530174 CUL5Q93034 780 aa21.7■■□□□ 1.06
PCNX3-203ENST00000530174 ZFP91Q96JP5 570 aaPredicted RBP21.7■■□□□ 1.06
PCNX3-203ENST00000530174 ALDH8A1Q9H2A2 487 aaPredicted RBP21.7■■□□□ 1.06
PCNX3-203ENST00000530174 CNTNAP5Q8WYK1 1306 aa21.7■■□□□ 1.06
PCNX3-203ENST00000530174 GOLGA8AA7E2F4 631 aa21.69■■□□□ 1.06
PCNX3-203ENST00000530174 GOLGA8BA8MQT2 603 aa21.69■■□□□ 1.06
PCNX3-203ENST00000530174 PIK3CDO00329 1044 aa21.69■■□□□ 1.06
PCNX3-203ENST00000530174 MEIS2O14770 477 aa21.69■■□□□ 1.06
PCNX3-203ENST00000530174 FGD1P98174 961 aa21.69■■□□□ 1.06
PCNX3-203ENST00000530174 MFSD5Q6N075 450 aa21.69■■□□□ 1.06
PCNX3-203ENST00000530174 BLOC1S2Q6QNY1 142 aa21.69■■□□□ 1.06
PCNX3-203ENST00000530174 EMID1Q96A84 441 aaPredicted RBP21.69■■□□□ 1.06
PCNX3-203ENST00000530174 NBPF20Q3BBV1 942 aa21.68■■□□□ 1.06
PCNX3-203ENST00000530174 Q6ZUG5 572 aa21.68■■□□□ 1.06
PCNX3-203ENST00000530174 HEATR3Q7Z4Q2 680 aa21.68■■□□□ 1.06
PCNX3-203ENST00000530174 PPP1R13LQ8WUF5 828 aa21.68■■□□□ 1.06
PCNX3-203ENST00000530174 GPKOWQ92917 476 aaPredicted RBP eCLIP21.68■■□□□ 1.06
PCNX3-203ENST00000530174 PSTPIP2Q9H939 334 aa21.68■■□□□ 1.06
PCNX3-203ENST00000530174 NAP1L2Q9ULW6 460 aaPredicted RBP21.68■■□□□ 1.06
PCNX3-203ENST00000530174 EPB41L2O43491 1005 aaKnown RBP21.67■■□□□ 1.06
PCNX3-203ENST00000530174 CDC27P30260 824 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 CYP2C18P33260 490 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 RCAN1P53805 252 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 MRPS9P82933 396 aaKnown RBP21.67■■□□□ 1.06
PCNX3-203ENST00000530174 APOBRQ0VD83 1088 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 FUT2Q10981 343 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 LAMC2Q13753 1193 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 FAM47CQ5HY64 1035 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 GPR153Q6NV75 609 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 KCNV1Q6PIU1 500 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 DHX37Q8IY37 1157 aaKnown RBP21.67■■□□□ 1.06
PCNX3-203ENST00000530174 HIPK3Q9H422 1215 aa21.67■■□□□ 1.06
PCNX3-203ENST00000530174 FAM217BQ9NTX9 383 aaPredicted RBP21.67■■□□□ 1.06
PCNX3-203ENST00000530174 TRMT13Q9NUP7 481 aaKnown RBP21.67■■□□□ 1.06
PCNX3-203ENST00000530174 UMODL1Q5DID0 1318 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 SORBS3O60504 671 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 CSF2RAP15509 400 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 UBA1P22314 1058 aaKnown RBP21.66■■□□□ 1.06
PCNX3-203ENST00000530174 RPS6KB1P23443 525 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 SP2Q02086 613 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 NFRKBQ6P4R8 1299 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 TMEM199Q8N511 208 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 PPTC7Q8NI37 304 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 BRF1Q92994 677 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 NOC4LQ9BVI4 516 aaKnown RBP21.66■■□□□ 1.06
PCNX3-203ENST00000530174 MYH7BA7E2Y1 1941 aa21.66■■□□□ 1.06
PCNX3-203ENST00000530174 STAM2O75886 525 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 GGPS1O95749 300 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 TGFB3P10600 412 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 CASTP20810 708 aaKnown RBP21.65■■□□□ 1.06
PCNX3-203ENST00000530174 PSMA5P28066 241 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 CHMP4BP1P59074 171 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 PPIGQ13427 754 aaKnown RBP eCLIP21.65■■□□□ 1.061e-7■■□□□ 11.5
PCNX3-203ENST00000530174 DGKDQ16760 1214 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 UBE2SQ16763 222 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 GNPTABQ3T906 1256 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 CELF3Q5SZQ8 465 aaKnown RBP21.65■■□□□ 1.06
PCNX3-203ENST00000530174 MYSM1Q5VVJ2 828 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 WWC2Q6AWC2 1192 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 KAT2BQ92831 832 aa21.65■■□□□ 1.06
PCNX3-203ENST00000530174 RNPC3Q96LT9 517 aaKnown RBP21.65■■□□□ 1.06
PCNX3-203ENST00000530174 INPP4AQ96PE3 977 aaPredicted RBP21.65■■□□□ 1.06
PCNX3-203ENST00000530174 SUPT20HL2P0C7V6 817 aa21.64■■□□□ 1.05
PCNX3-203ENST00000530174 CYP2C9P11712 490 aa21.64■■□□□ 1.05
PCNX3-203ENST00000530174 METAP2P50579 478 aaKnown RBP eCLIP21.64■■□□□ 1.05
PCNX3-203ENST00000530174 PCNX4Q63HM2 1172 aa21.64■■□□□ 1.05
PCNX3-203ENST00000530174 SPATA33Q96N06 139 aa21.64■■□□□ 1.05
PCNX3-203ENST00000530174 USP26Q9BXU7 913 aa21.64■■□□□ 1.05
PCNX3-203ENST00000530174 RTEL1Q9NZ71 1219 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms