RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 HSD17B4P51659 736 aa16.33■□□□□ 0.2
TTC39A-216ENST00000530004 RPS6P62753 249 aaKnown RBP16.33■□□□□ 0.2
TTC39A-216ENST00000530004 USP17L6PQ6QN14 398 aa16.33■□□□□ 0.2
TTC39A-216ENST00000530004 ANKRD35Q8N283 1001 aa16.33■□□□□ 0.2
TTC39A-216ENST00000530004 GRPEL1Q9HAV7 217 aa16.33■□□□□ 0.2
TTC39A-216ENST00000530004 MAP3K20Q9NYL2 800 aaKnown RBP16.33■□□□□ 0.2
TTC39A-216ENST00000530004 TSKSQ9UJT2 592 aa16.33■□□□□ 0.2
TTC39A-216ENST00000530004 PCNTO95613 3336 aa16.33■□□□□ 0.2
TTC39A-216ENST00000530004 VWA3AA6NCI4 1184 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 STRNO43815 780 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 ECM2O94769 699 aaPredicted RBP16.32■□□□□ 0.2
TTC39A-216ENST00000530004 FCER1AP12319 257 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 CTGFP29279 349 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 HOXA13P31271 388 aaPredicted RBP16.32■□□□□ 0.2
TTC39A-216ENST00000530004 MRE11P49959 708 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 BAATQ14032 418 aaPredicted RBP16.32■□□□□ 0.2
TTC39A-216ENST00000530004 KCTD2Q14681 263 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 PLEKHH3Q7Z736 793 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 TEX2Q8IWB9 1127 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 MMP19Q99542 508 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 CYP39A1Q9NYL5 469 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 KCNH3Q9ULD8 1083 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 IVNS1ABPQ9Y6Y0 642 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 CEP350Q5VT06 3117 aa16.32■□□□□ 0.2
TTC39A-216ENST00000530004 ARL6IP4Q66PJ3 421 aaKnown RBP16.31■□□□□ 0.2
TTC39A-216ENST00000530004 SLC30A10Q6XR72 485 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 ABRAQ8N0Z2 381 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 SDF4Q9BRK5 362 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 FUCA2Q9BTY2 467 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 RBSNQ9H1K0 784 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 TMEM60Q9H2L4 133 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 PFASO15067 1338 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 TNPO2O14787 897 aaKnown RBP16.31■□□□□ 0.2
TTC39A-216ENST00000530004 NEMFO60524 1076 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 PSMC4P43686 418 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 FCGRTP55899 365 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 IL17AQ16552 155 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 SYTL5Q8TDW5 730 aaPredicted RBP16.31■□□□□ 0.2
TTC39A-216ENST00000530004 ZNF296Q8WUU4 475 aaPredicted RBP16.31■□□□□ 0.2
TTC39A-216ENST00000530004 TIGD1Q96MW7 591 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 ARHGAP39Q9C0H5 1083 aa16.31■□□□□ 0.2
TTC39A-216ENST00000530004 LAD1O00515 517 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 FKTNO75072 461 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 CCDC192P0DO97 292 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 AP3B2Q13367 1082 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 ORC2Q13416 577 aaPredicted RBP16.3■□□□□ 0.2
TTC39A-216ENST00000530004 GRB14Q14449 540 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 KIF22Q14807 665 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 USP49Q70CQ1 688 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 TRIM47Q96LD4 638 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 ANO3Q9BYT9 981 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 COL20A1Q9P218 1284 aa16.3■□□□□ 0.2
TTC39A-216ENST00000530004 DNAJC25-GNG10A0A024R161 153 aa16.29■□□□□ 0.2
TTC39A-216ENST00000530004 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.29■□□□□ 0.2
TTC39A-216ENST00000530004 SLC15A5A6NIM6 579 aa16.29■□□□□ 0.2
TTC39A-216ENST00000530004 EDIL3O43854 480 aa16.29■□□□□ 0.2
TTC39A-216ENST00000530004 ADORA2AP29274 412 aa16.29■□□□□ 0.2
TTC39A-216ENST00000530004 CAP1Q01518 475 aa16.29■□□□□ 0.2
TTC39A-216ENST00000530004 MCTP2Q6DN12 878 aa16.29■□□□□ 0.2
TTC39A-216ENST00000530004 DTHD1Q6ZMT9 781 aa16.29■□□□□ 0.2
TTC39A-216ENST00000530004 FCHSD1Q86WN1 690 aa16.29■□□□□ 0.2
TTC39A-216ENST00000530004 SYMPKQ92797 1274 aaKnown RBP16.29■□□□□ 0.2
TTC39A-216ENST00000530004 EPSTI1Q96J88 318 aa16.29■□□□□ 0.2
TTC39A-216ENST00000530004 POLR2DO15514 142 aaKnown RBP16.28■□□□□ 0.2
TTC39A-216ENST00000530004 TDP2O95551 362 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 PGK2P07205 417 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 OR52Z1P0C646 297 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 TYRO3Q06418 890 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 MORN1Q5T089 497 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 CD99L2Q8TCZ2 262 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 ERO1AQ96HE7 468 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 PURBQ96QR8 312 aaKnown RBP16.28■□□□□ 0.2
TTC39A-216ENST00000530004 SPDYE3A6NKU9 549 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 POTEB2H3BUK9 544 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 FOSP01100 380 aaPredicted RBP16.28■□□□□ 0.2
TTC39A-216ENST00000530004 XRCC6P12956 609 aaKnown RBP eCLIP16.28■□□□□ 0.2
TTC39A-216ENST00000530004 LONP1P36776 959 aaKnown RBP16.28■□□□□ 0.2
TTC39A-216ENST00000530004 PRPHP41219 470 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 CNTN2Q02246 1040 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 LONRF3Q496Y0 759 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 SASS6Q6UVJ0 657 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 POTEDQ86YR6 584 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 FAM133AQ8N9E0 248 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 TAAR1Q96RJ0 339 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 NUDT12Q9BQG2 462 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 PANK2Q9BZ23 570 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 GJD2Q9UKL4 321 aa16.28■□□□□ 0.2
TTC39A-216ENST00000530004 COBLO75128 1261 aa16.27■□□□□ 0.2
TTC39A-216ENST00000530004 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
TTC39A-216ENST00000530004 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.2
TTC39A-216ENST00000530004 PDILTQ8N807 584 aa16.27■□□□□ 0.2
TTC39A-216ENST00000530004 RNF214Q8ND24 703 aa16.27■□□□□ 0.2
TTC39A-216ENST00000530004 CNNM3Q8NE01 707 aa16.27■□□□□ 0.2
TTC39A-216ENST00000530004 SOCS4Q8WXH5 440 aa16.27■□□□□ 0.2
TTC39A-216ENST00000530004 SLC37A4O43826 429 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 HSPA1AP0DMV8 641 aaKnown RBP16.26■□□□□ 0.19
TTC39A-216ENST00000530004 HSPA1BP0DMV9 641 aaKnown RBP16.26■□□□□ 0.19
TTC39A-216ENST00000530004 MAP2K5Q13163 448 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 CALCRLQ16602 461 aa16.26■□□□□ 0.19
TTC39A-216ENST00000530004 ZNF792Q3KQV3 632 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms