RNA–Protein interactions for RNA: ENST00000529802.1

FOXRED1-209, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 2

Gene FOXRED1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-209ENST00000529802 C11orf16Q9NQ32 467 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 RBM28Q9NW13 759 aaKnown RBP16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 ADD3Q9UEY8 706 aaKnown RBP16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 SEC63Q9UGP8 760 aaKnown RBP16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 MRPL11Q9Y3B7 192 aaKnown RBP16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 PCDHA11Q9Y5I1 949 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 MTCH2Q9Y6C9 303 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 ASTN1O14525 1302 aa16.34■□□□□ 0.21
FOXRED1-209ENST00000529802 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 EPOPA6NHQ4 379 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 ASB14A6NK59 587 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 CASTP20810 708 aaKnown RBP16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 PTGS1P23219 599 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 ANAPC15P60006 121 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 NKX3-2P78367 333 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 TMEM31Q5JXX7 168 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 KRT40Q6A162 431 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 STAG2Q8N3U4 1231 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 ABHD16BQ9H3Z7 469 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 JMJD4Q9H9V9 463 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 CYP46A1Q9Y6A2 500 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 SLC4A7Q9Y6M7 1214 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 GRIN2DO15399 1336 aa16.33■□□□□ 0.2
FOXRED1-209ENST00000529802 LOC102724159A0A0B4J2E5 919 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 CCDC196A0A1B0GTZ2 297 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 PTPDC1A2A3K4 754 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 FAM86C2PA6NEL3 165 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 ZBBXA8MT70 800 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 ZBTB43O43298 467 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 CA3P07451 260 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 RPS6KB1P23443 525 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 PWP2Q15269 919 aaKnown RBP16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 QRICH1Q2TAL8 776 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 USH1GQ495M9 461 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 RGS22Q8NE09 1264 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 RRP36Q96EU6 259 aaKnown RBP16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 SCLYQ96I15 445 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 SPZ1Q9BXG8 430 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 TM6SF1Q9BZW5 370 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 RIOX1Q9H6W3 641 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 CERS4Q9HA82 394 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 SENP2Q9HC62 589 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 A1CFQ9NQ94 594 aaKnown RBP16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 PIEZO1Q92508 2521 aa16.32■□□□□ 0.2
FOXRED1-209ENST00000529802 PNMA6FA0A0J9YX94 578 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 B4GALT4O60513 344 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 ATP2A2P16615 1042 aaKnown RBP16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 ITGA7Q13683 1181 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 APOA5Q6Q788 366 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 RNF207Q6ZRF8 634 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 RUFY3Q7L099 469 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 MICU3Q86XE3 530 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 HOMER1Q86YM7 354 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 CCDC144CPQ8IYA2 1237 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 FBXL16Q8N461 479 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 SAMD3Q8N6K7 520 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 FANCBQ8NB91 859 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 TRPV6Q9H1D0 765 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 CPVLQ9H3G5 476 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 CYP39A1Q9NYL5 469 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 NAP1L2Q9ULW6 460 aaPredicted RBP16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 MUC6Q6W4X9 2439 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 SCN5AQ14524 2016 aa16.31■□□□□ 0.2
FOXRED1-209ENST00000529802 KLF18A0A0U1RQI7 1052 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 GTPBP6O43824 516 aaPredicted RBP16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 TLL1O43897 1013 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 ARHGEF15O94989 841 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 POU3F3P20264 500 aaPredicted RBP16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 TTLL4Q14679 1199 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 MUM1L1Q5H9M0 696 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 Q6ZUG5 572 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 TLK2Q86UE8 772 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 MYL10Q9BUA6 226 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 GPHNQ9NQX3 736 aaPredicted RBP16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 MAP3K20Q9NYL2 800 aaKnown RBP16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
FOXRED1-209ENST00000529802 TANC1Q9C0D5 1861 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 GOLGA8AA7E2F4 631 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 GOLGA8BA8MQT2 603 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 PSMC6P62333 389 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 TNFAIP2Q03169 654 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 RTN1Q16799 776 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 FAM133AQ8N9E0 248 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 DNERQ8NFT8 737 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 PIGSQ96S52 555 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 ZSWIM6Q9HCJ5 1215 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 COG5Q9UP83 839 aa16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 GNEQ9Y223 722 aaKnown RBP16.29■□□□□ 0.2
FOXRED1-209ENST00000529802 NFIBO00712 420 aa16.28■□□□□ 0.2
FOXRED1-209ENST00000529802 GPR37L1O60883 481 aa16.28■□□□□ 0.2
FOXRED1-209ENST00000529802 CABYRO75952 493 aa16.28■□□□□ 0.2
FOXRED1-209ENST00000529802 CALML3P27482 149 aa16.28■□□□□ 0.2
FOXRED1-209ENST00000529802 METAP2P50579 478 aaKnown RBP eCLIP16.28■□□□□ 0.2
FOXRED1-209ENST00000529802 CNTN2Q02246 1040 aa16.28■□□□□ 0.2
FOXRED1-209ENST00000529802 BAATQ14032 418 aaPredicted RBP16.28■□□□□ 0.2
FOXRED1-209ENST00000529802 FSCN1Q16658 493 aaKnown RBP16.28■□□□□ 0.2
FOXRED1-209ENST00000529802 NOL8Q76FK4 1167 aaKnown RBP16.28■□□□□ 0.2
FOXRED1-209ENST00000529802 RPUSD2Q8IZ73 545 aaKnown RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms