RNA–Protein interactions for RNA: ENST00000529736.5

CTTN-213, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-213ENST00000529736 ARIH1Q9Y4X5 557 aaPredicted RBP16.73■□□□□ 0.27
CTTN-213ENST00000529736 GBF1Q92538 1859 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 TRIM43BA6NCK2 446 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 PTGS1P23219 599 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 LONP1P36776 959 aaKnown RBP16.72■□□□□ 0.27
CTTN-213ENST00000529736 TXLNAP40222 546 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 HMGCS2P54868 508 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 SPP2Q13103 211 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 TTC38Q5R3I4 469 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 POTEEQ6S8J3 1075 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 LRRC8AQ8IWT6 810 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
CTTN-213ENST00000529736 SPC24Q8NBT2 197 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 ENOX1Q8TC92 643 aaKnown RBP16.72■□□□□ 0.27
CTTN-213ENST00000529736 TRIM43Q96BQ3 446 aaPredicted RBP16.72■□□□□ 0.27
CTTN-213ENST00000529736 MAGEF1Q9HAY2 307 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 PRDM5Q9NQX1 630 aaPredicted RBP16.72■□□□□ 0.27
CTTN-213ENST00000529736 SWAP70Q9UH65 585 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 PAXBP1Q9Y5B6 917 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 SMCHD1A6NHR9 2005 aa16.72■□□□□ 0.27
CTTN-213ENST00000529736 PLEKHA8P1O95397 391 aa16.71■□□□□ 0.27
CTTN-213ENST00000529736 ITGB8P26012 769 aa16.71■□□□□ 0.27
CTTN-213ENST00000529736 PRPHP41219 470 aa16.71■□□□□ 0.27
CTTN-213ENST00000529736 NLRP5P59047 1200 aa16.71■□□□□ 0.27
CTTN-213ENST00000529736 Q3C1V9 767 aa16.71■□□□□ 0.27
CTTN-213ENST00000529736 METTL16Q86W50 562 aaKnown RBP16.71■□□□□ 0.27
CTTN-213ENST00000529736 TRMT44Q8IYL2 757 aaKnown RBP16.71■□□□□ 0.27
CTTN-213ENST00000529736 MYRIPQ8NFW9 859 aa16.71■□□□□ 0.27
CTTN-213ENST00000529736 SH3RF3Q8TEJ3 882 aaPredicted RBP16.71■□□□□ 0.27
CTTN-213ENST00000529736 THEGQ9P2T0 379 aa16.71■□□□□ 0.27
CTTN-213ENST00000529736 PCDHA4Q9UN74 947 aa16.71■□□□□ 0.27
CTTN-213ENST00000529736 PCDHB6Q9Y5E3 794 aa16.71■□□□□ 0.27
CTTN-213ENST00000529736 CYP2D7A0A087X1C5 515 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 ESYT2A0FGR8 921 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
CTTN-213ENST00000529736 PRDM1O75626 825 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 TOP1P11387 765 aaKnown RBP16.7■□□□□ 0.26
CTTN-213ENST00000529736 BTDP43251 543 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 MRPS5P82675 430 aaKnown RBP16.7■□□□□ 0.26
CTTN-213ENST00000529736 NR5A1Q13285 461 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 MORC3Q14149 939 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 NCAPHQ15003 741 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 LONRF3Q496Y0 759 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 MORN1Q5T089 497 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 SLC39A5Q6ZMH5 540 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 TEX2Q8IWB9 1127 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 TEX11Q8IYF3 940 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 IQUBQ8NA54 791 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 SOCS4Q8WXH5 440 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 P2RX7Q99572 595 aaKnown RBP16.7■□□□□ 0.26
CTTN-213ENST00000529736 LRFN3Q9BTN0 628 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 C1QTNF1Q9BXJ1 281 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 IDI2Q9BXS1 227 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 ZNF576Q9H609 170 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 PDLIM7Q9NR12 457 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 RMND1Q9NWS8 449 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 FLRT1Q9NZU1 646 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 VPS54Q9P1Q0 977 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 R3HCC1Q9Y3T6 440 aaKnown RBP16.7■□□□□ 0.26
CTTN-213ENST00000529736 PCDHA5Q9Y5H7 936 aa16.7■□□□□ 0.26
CTTN-213ENST00000529736 FAM196BA6NMK8 535 aa16.69■□□□□ 0.26
CTTN-213ENST00000529736 ACTN4O43707 911 aaKnown RBP16.69■□□□□ 0.26
CTTN-213ENST00000529736 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
CTTN-213ENST00000529736 DNAJB2P25686 324 aa16.69■□□□□ 0.26
CTTN-213ENST00000529736 GNA11P29992 359 aa16.69■□□□□ 0.26
CTTN-213ENST00000529736 NPY5RQ15761 445 aa16.69■□□□□ 0.26
CTTN-213ENST00000529736 FCHSD1Q86WN1 690 aa16.69■□□□□ 0.26
CTTN-213ENST00000529736 BLIDQ8IZY5 108 aa16.69■□□□□ 0.26
CTTN-213ENST00000529736 CLIC6Q96NY7 704 aa16.69■□□□□ 0.26
CTTN-213ENST00000529736 PORCNQ9H237 461 aa16.69■□□□□ 0.26
CTTN-213ENST00000529736 CUEDC2Q9H467 287 aa16.69■□□□□ 0.26
CTTN-213ENST00000529736 DDX4Q9NQI0 724 aaKnown RBP16.69■□□□□ 0.26
CTTN-213ENST00000529736 CDK5RAP2Q96SN8 1893 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 DNM1LO00429 736 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 POLR2DO15514 142 aaKnown RBP16.68■□□□□ 0.26
CTTN-213ENST00000529736 RRP9O43818 475 aaKnown RBP16.68■□□□□ 0.26
CTTN-213ENST00000529736 ENTPD3O75355 529 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 RASA1P20936 1047 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 RRP1BQ14684 758 aaKnown RBP16.68■□□□□ 0.26
CTTN-213ENST00000529736 TRIM60Q495X7 471 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 GJC2Q5T442 439 aaPredicted RBP16.68■□□□□ 0.26
CTTN-213ENST00000529736 PPP1R18Q6NYC8 613 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 KRT25Q7Z3Z0 450 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 GPR142Q7Z601 462 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 ALYREFQ86V81 257 aaKnown RBP16.68■□□□□ 0.26
CTTN-213ENST00000529736 ZSCAN29Q8IWY8 852 aaPredicted RBP16.68■□□□□ 0.26
CTTN-213ENST00000529736 ZNF280CQ8ND82 737 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 OXER1Q8TDS5 423 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 LPAR1Q92633 364 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 RNPC3Q96LT9 517 aaKnown RBP16.68■□□□□ 0.26
CTTN-213ENST00000529736 AK8Q96MA6 479 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 CTAGE1Q96RT6 745 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 EPHX3Q9H6B9 360 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 BARHL2Q9NY43 387 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 RBPJLQ9UBG7 517 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 DDX20Q9UHI6 824 aaKnown RBP16.68■□□□□ 0.26
CTTN-213ENST00000529736 FLT1P17948 1338 aa16.68■□□□□ 0.26
CTTN-213ENST00000529736 SFPQP23246 707 aaKnown RBP eCLIP16.67■□□□□ 0.26
CTTN-213ENST00000529736 RGS2P41220 211 aa16.67■□□□□ 0.26
CTTN-213ENST00000529736 PPP1R2P41236 205 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms