RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 MRPS9P82933 396 aaKnown RBP16.43■□□□□ 0.22
UBXN1-209ENST00000528907 ARHGAP4P98171 946 aa16.43■□□□□ 0.22
UBXN1-209ENST00000528907 CACNB2Q08289 660 aaPredicted RBP16.43■□□□□ 0.22
UBXN1-209ENST00000528907 NONOQ15233 471 aaKnown RBP eCLIP16.43■□□□□ 0.22
UBXN1-209ENST00000528907 SLC9C1Q4G0N8 1177 aa16.43■□□□□ 0.22
UBXN1-209ENST00000528907 MOXD1Q6UVY6 613 aa16.43■□□□□ 0.22
UBXN1-209ENST00000528907 NIPA1Q7RTP0 329 aa16.43■□□□□ 0.22
UBXN1-209ENST00000528907 RASGRP4Q8TDF6 673 aa16.43■□□□□ 0.22
UBXN1-209ENST00000528907 INPP4AQ96PE3 977 aaPredicted RBP16.43■□□□□ 0.22
UBXN1-209ENST00000528907 CNPY2Q9Y2B0 182 aa16.43■□□□□ 0.22
UBXN1-209ENST00000528907 CCDC194A0A1B0GVG4 234 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 H3BQV1 296 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 MAFGO15525 162 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 EDIL3O43854 480 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 INHAP05111 366 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 ICAM3P32942 547 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 GUCY1B3Q02153 619 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 NR5A1Q13285 461 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 ACVR2BQ13705 512 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 TAPT1Q6NXT6 567 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 IL31RAQ8NI17 732 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 RBM19Q9Y4C8 960 aaKnown RBP16.42■□□□□ 0.22
UBXN1-209ENST00000528907 UBIAD1Q9Y5Z9 338 aa16.42■□□□□ 0.22
UBXN1-209ENST00000528907 CYP3A7-CYP3A51PA0A087WV96 503 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 PRKAR2AP13861 404 aaKnown RBP16.41■□□□□ 0.22
UBXN1-209ENST00000528907 CYP3A7P24462 503 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 TRIM32Q13049 653 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
UBXN1-209ENST00000528907 IQSEC1Q6DN90 963 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 KCNV1Q6PIU1 500 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 TRPV1Q8NER1 839 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 ZNF333Q96JL9 665 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 PGBD1Q96JS3 809 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 MBOAT7Q96N66 472 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 NAP1L4Q99733 375 aaKnown RBP16.41■□□□□ 0.22
UBXN1-209ENST00000528907 FOXD4L1Q9NU39 408 aa16.41■□□□□ 0.22
UBXN1-209ENST00000528907 MEIS1O00470 390 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 SEPT4O43236 478 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 STX6O43752 255 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 RGS20O76081 388 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 TGFB3P10600 412 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 CAPN2P17655 700 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 TRAPPC10P48553 1259 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 FOSBP53539 338 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 GNPTABQ3T906 1256 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 EARS2Q5JPH6 523 aaKnown RBP16.4■□□□□ 0.22
UBXN1-209ENST00000528907 PIK3AP1Q6ZUJ8 805 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 NEK8Q86SG6 692 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 NLRX1Q86UT6 975 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 SH3TC2Q8TF17 1288 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 SCFD2Q8WU76 684 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 GPRASP2Q96D09 838 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 MXRA8Q9BRK3 442 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 HMX1Q9NP08 348 aaPredicted RBP16.4■□□□□ 0.22
UBXN1-209ENST00000528907 JADE2Q9NQC1 790 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 MTMR6Q9Y217 621 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 FRMPD3Q5JV73 1810 aa16.4■□□□□ 0.22
UBXN1-209ENST00000528907 IGLV3-22A0A075B6J6 115 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 SPATA31C2B4DYI2 1134 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 KIF28PB7ZC32 967 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 MSCO60682 206 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 MYCLP12524 364 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-209ENST00000528907 AKR1A1P14550 325 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 GCFC2P16383 781 aaKnown RBP16.39■□□□□ 0.21
UBXN1-209ENST00000528907 ITGB5P18084 799 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 NKX3-2P78367 333 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 ORC2Q13416 577 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-209ENST00000528907 CEP55Q53EZ4 464 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 PPP4R3AQ6IN85 833 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 CCDC62Q6P9F0 684 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 FBXO16Q8IX29 292 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-209ENST00000528907 CDHR1Q96JP9 859 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 PAK6Q9NQU5 681 aaPredicted RBP16.39■□□□□ 0.21
UBXN1-209ENST00000528907 FAM184BQ9ULE4 1060 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 Q9Y3F1 56 aa16.39■□□□□ 0.21
UBXN1-209ENST00000528907 NKRFO15226 690 aaKnown RBP eCLIP16.38■□□□□ 0.21
UBXN1-209ENST00000528907 FIBPO43427 364 aa16.38■□□□□ 0.21
UBXN1-209ENST00000528907 DDIT3P35638 169 aa16.38■□□□□ 0.21
UBXN1-209ENST00000528907 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-209ENST00000528907 INF2Q27J81 1249 aa16.38■□□□□ 0.21
UBXN1-209ENST00000528907 Q4G0T1 1027 aa16.38■□□□□ 0.21
UBXN1-209ENST00000528907 PRAMEF19Q5SWL8 479 aa16.38■□□□□ 0.21
UBXN1-209ENST00000528907 BRAPQ7Z569 592 aa16.38■□□□□ 0.21
UBXN1-209ENST00000528907 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
UBXN1-209ENST00000528907 ZSCAN16Q9H4T2 348 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-209ENST00000528907 ZHX1Q9UKY1 873 aaPredicted RBP16.38■□□□□ 0.21
UBXN1-209ENST00000528907 DDX49Q9Y6V7 483 aaKnown RBP16.38■□□□□ 0.21
UBXN1-209ENST00000528907 MYH15Q9Y2K3 1946 aa16.37■□□□□ 0.21
UBXN1-209ENST00000528907 FAM86B1E9PN63 330 aa16.37■□□□□ 0.21
UBXN1-209ENST00000528907 FAM86B2P0C5J1 330 aa16.37■□□□□ 0.21
UBXN1-209ENST00000528907 CCND3P30281 292 aaPredicted RBP16.37■□□□□ 0.21
UBXN1-209ENST00000528907 SEMA3FQ13275 785 aa16.37■□□□□ 0.21
UBXN1-209ENST00000528907 GNL2Q13823 731 aaKnown RBP16.37■□□□□ 0.21
UBXN1-209ENST00000528907 TTLL4Q14679 1199 aa16.37■□□□□ 0.21
UBXN1-209ENST00000528907 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
UBXN1-209ENST00000528907 DUSP28Q4G0W2 176 aa16.37■□□□□ 0.21
UBXN1-209ENST00000528907 EEPD1Q7L9B9 569 aa16.37■□□□□ 0.21
UBXN1-209ENST00000528907 LENG9Q96B70 501 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms