RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 KCNMA1Q12791 1236 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 ZSCAN26Q16670 478 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 ZCWPW2Q504Y3 356 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 KRT79Q5XKE5 535 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 PRR5LQ6MZQ0 368 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 PPP4R3CPQ6ZMV5 832 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 RNF10Q8N5U6 811 aaKnown RBP9.3□□□□□ -0.92
CSTF3-208ENST00000528865 AENQ8WTP8 325 aaKnown RBP9.3□□□□□ -0.92
CSTF3-208ENST00000528865 COG1Q8WTW3 980 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 DNAJC19Q96DA6 116 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 RBM17Q96I25 401 aaKnown RBP9.3□□□□□ -0.92
CSTF3-208ENST00000528865 PCMTD1Q96MG8 357 aaPredicted RBP9.3□□□□□ -0.92
CSTF3-208ENST00000528865 CEP63Q96MT8 703 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 NAP1L4Q99733 375 aaKnown RBP9.3□□□□□ -0.92
CSTF3-208ENST00000528865 TSG101Q99816 390 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 UBA5Q9GZZ9 404 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 NUCKS1Q9H1E3 243 aaKnown RBP9.3□□□□□ -0.92
CSTF3-208ENST00000528865 VAT1LQ9HCJ6 419 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 CWC15Q9P013 229 aaKnown RBP9.3□□□□□ -0.92
CSTF3-208ENST00000528865 VPS18Q9P253 973 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 SWAP70Q9UH65 585 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 GGA1Q9UJY5 639 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 HPCAL4Q9UM19 191 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 ATF5Q9Y2D1 282 aaPredicted RBP9.3□□□□□ -0.92
CSTF3-208ENST00000528865 DUSP10Q9Y6W6 482 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 LTBP4Q8N2S1 1624 aa9.3□□□□□ -0.92
CSTF3-208ENST00000528865 KLRG2A4D1S0 409 aaPredicted RBP9.29□□□□□ -0.92
CSTF3-208ENST00000528865 EPHB6O15197 1021 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 SLC37A4O43826 429 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 UFL1O94874 794 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 CLSTN1O94985 981 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 TDP2O95551 362 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 GNA14O95837 355 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 IVLP07476 585 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 IDEP14735 1019 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 TNFRSF8P28908 595 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 EIF4A3P38919 411 aaKnown RBP9.29□□□□□ -0.92
CSTF3-208ENST00000528865 MAGEA1P43355 309 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 LMAN1P49257 510 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 KIF11P52732 1056 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 FKBP3Q00688 224 aaKnown RBP9.29□□□□□ -0.92
CSTF3-208ENST00000528865 ZNF543Q08ER8 600 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 HSP90B2PQ58FF3 399 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 TMC4Q7Z404 712 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 SLC51AQ86UW1 340 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 MYOCDQ8IZQ8 938 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 CNBD1Q8NA66 436 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 TBC1D16Q8TBP0 767 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 DDX12PQ92771 950 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 HAS1Q92839 578 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 HPS3Q969F9 1004 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 COA7Q96BR5 231 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 MBOAT7Q96N66 472 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 GPR101Q96P66 508 aaPredicted RBP9.29□□□□□ -0.92
CSTF3-208ENST00000528865 CRAMP1Q96RY5 1269 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 NUDT12Q9BQG2 462 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 TSPYL1Q9H0U9 437 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 GLT8D2Q9H1C3 349 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 JMJD4Q9H9V9 463 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 RNF14Q9UBS8 474 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 PCDHA2Q9Y5H9 948 aa9.29□□□□□ -0.92
CSTF3-208ENST00000528865 CDK5RAP2Q96SN8 1893 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 CYP3A7-CYP3A51PA0A087WV96 503 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 AGPSO00116 658 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 ZNF185O15231 689 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 NOL4O94818 638 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 TTLL1O95922 423 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 PLEKP08567 350 aaPredicted RBP9.28□□□□□ -0.92
CSTF3-208ENST00000528865 AKR1B1P15121 316 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 CYP3A7P24462 503 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 MRPL12P52815 198 aaKnown RBP9.28□□□□□ -0.92
CSTF3-208ENST00000528865 SLC20A2Q08357 652 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 SF3B2Q13435 895 aaKnown RBP9.28□□□□□ -0.92
CSTF3-208ENST00000528865 ECM1Q16610 540 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 GLE1Q53GS7 698 aaKnown RBP9.28□□□□□ -0.92
CSTF3-208ENST00000528865 MFSD14BQ5SR56 506 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 HGSNATQ68CP4 663 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 CCDC70Q6NSX1 233 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 MOXD1Q6UVY6 613 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 KRT26Q7Z3Y9 468 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 KCNK18Q7Z418 384 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 C2CD5Q86YS7 1000 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 SP8Q8IXZ3 490 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 SNX29Q8TEQ0 813 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 RPGRQ92834 1020 aaKnown RBP9.28□□□□□ -0.92
CSTF3-208ENST00000528865 CDK5RAP3Q96JB5 506 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 IFIH1Q9BYX4 1025 aaKnown RBP9.28□□□□□ -0.92
CSTF3-208ENST00000528865 MMRN2Q9H8L6 949 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 CEP72Q9P209 647 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 POLLQ9UGP5 575 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 TSKSQ9UJT2 592 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 FAM184BQ9ULE4 1060 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 MTMR7Q9Y216 660 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 DAGLAQ9Y4D2 1042 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 HYOU1Q9Y4L1 999 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 MYH1P12882 1939 aa9.28□□□□□ -0.92
CSTF3-208ENST00000528865 NHSQ6T4R5 1651 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 BTAF1O14981 1849 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 MACROD2A1Z1Q3 448 aa9.27□□□□□ -0.93
CSTF3-208ENST00000528865 FRMD3A2A2Y4 597 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms