RNA–Protein interactions for RNA: ENST00000528744.5

SRPRA-203, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-203ENST00000528744 CNNM2Q9H8M5 875 aa13.46□□□□□ -0.25
SRPRA-203ENST00000528744 PXMP2Q9NR77 195 aa13.46□□□□□ -0.25
SRPRA-203ENST00000528744 TMEM265A0A087WTH1 108 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 IFIT3O14879 490 aaKnown RBP13.45□□□□□ -0.26
SRPRA-203ENST00000528744 ZBTB5O15062 677 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 SORBS3O60504 671 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 ARHGEF15O94989 841 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 MMP3P08254 477 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 CHMP4BP1P59074 171 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 STXBP2Q15833 593 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 TCTN1Q2MV58 587 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 ARHGEF16Q5VV41 709 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 GDF6Q6KF10 455 aaPredicted RBP13.45□□□□□ -0.26
SRPRA-203ENST00000528744 DEFB128Q7Z7B8 93 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 MB21D2Q8IYB1 491 aaPredicted RBP13.45□□□□□ -0.26
SRPRA-203ENST00000528744 DHX38Q92620 1227 aaKnown RBP13.45□□□□□ -0.26
SRPRA-203ENST00000528744 IWS1Q96ST2 819 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 PDCD2LQ9BRP1 358 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 AMNQ9BXJ7 453 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 SEZ6LQ9BYH1 1024 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 PRDM12Q9H4Q4 367 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 TELO2Q9Y4R8 837 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 PCDHA1Q9Y5I3 950 aa13.45□□□□□ -0.26
SRPRA-203ENST00000528744 RAD50Q92878 1312 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 CUL9Q8IWT3 2517 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 EIF3JO75822 258 aaKnown RBP13.44□□□□□ -0.26
SRPRA-203ENST00000528744 GH1P01241 217 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 IQCF3P0C7M6 154 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 ZNF200P98182 395 aaPredicted RBP13.44□□□□□ -0.26
SRPRA-203ENST00000528744 NFRKBQ6P4R8 1299 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 VSIG10LQ86VR7 867 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 HOMER1Q86YM7 354 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 PIBF1Q8WXW3 757 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 WNT8BQ93098 351 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 MAF1Q9H063 256 aa13.44□□□□□ -0.26
SRPRA-203ENST00000528744 RBM8AQ9Y5S9 174 aaKnown RBP13.44□□□□□ -0.26
SRPRA-203ENST00000528744 KPNA6O60684 536 aa13.43□□□□□ -0.26
SRPRA-203ENST00000528744 MYCLP12524 364 aaPredicted RBP13.43□□□□□ -0.26
SRPRA-203ENST00000528744 MYL10Q9BUA6 226 aa13.43□□□□□ -0.26
SRPRA-203ENST00000528744 LSG1Q9H089 658 aaKnown RBP13.43□□□□□ -0.26
SRPRA-203ENST00000528744 MYO9BQ13459 2157 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 SCN10AQ9Y5Y9 1956 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 HAS3O00219 553 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 RFXAPO00287 272 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 SUPT20HL2P0C7V6 817 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 MRPS9P82933 396 aaKnown RBP13.42□□□□□ -0.26
SRPRA-203ENST00000528744 PGM5Q15124 567 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 MYSM1Q5VVJ2 828 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 TRAF7Q6Q0C0 670 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 SPRED2Q7Z698 418 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 FCHSD1Q86WN1 690 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 RPUSD2Q8IZ73 545 aaKnown RBP13.42□□□□□ -0.26
SRPRA-203ENST00000528744 NCOA7Q8NI08 942 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 RUFY2Q8WXA3 655 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 PPM1EQ8WY54 764 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 LY9Q9HBG7 655 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 HDAC6Q9UBN7 1215 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 SLC4A7Q9Y6M7 1214 aa13.42□□□□□ -0.26
SRPRA-203ENST00000528744 BAZ2BQ9UIF8 2168 aaKnown RBP13.42□□□□□ -0.26
SRPRA-203ENST00000528744 PNMA6FA0A0J9YX94 578 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 B4DLN1 442 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 PSEN2P49810 448 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 MRPL12P52815 198 aaKnown RBP13.41□□□□□ -0.26
SRPRA-203ENST00000528744 PTPN11Q06124 597 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-203ENST00000528744 TRDNQ13061 729 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 SEMA3FQ13275 785 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 WTAPQ15007 396 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 PTGISQ16647 500 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 HSDL1Q3SXM5 330 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 TMEM67Q5HYA8 995 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 TMCO2Q7Z6W1 182 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-203ENST00000528744 SESTD1Q86VW0 696 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 RAB11FIP4Q86YS3 637 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 CMTR1Q8N1G2 835 aaKnown RBP13.41□□□□□ -0.26
SRPRA-203ENST00000528744 EMID1Q96A84 441 aaPredicted RBP13.41□□□□□ -0.26
SRPRA-203ENST00000528744 MPHOSPH6Q99547 160 aaKnown RBP13.41□□□□□ -0.26
SRPRA-203ENST00000528744 ALG1Q9BT22 464 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 OSBPL7Q9BZF2 842 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 MRVI1Q9Y6F6 885 aa13.41□□□□□ -0.26
SRPRA-203ENST00000528744 MUC3AQ02505 3323 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 EPOPA6NHQ4 379 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 ZBBXA8MT70 800 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 GCOM1H8Y6P7 765 aaPredicted RBP13.4□□□□□ -0.26
SRPRA-203ENST00000528744 PLEKHA8P1O95397 391 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 POLR2MP0CAP2 368 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 ZNF286BP0CG31 522 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 HOXD8P13378 290 aaPredicted RBP13.4□□□□□ -0.26
SRPRA-203ENST00000528744 RXRAP19793 462 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 CASTP20810 708 aaKnown RBP13.4□□□□□ -0.26
SRPRA-203ENST00000528744 LAMC2Q13753 1193 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 CCDC85BQ15834 202 aaPredicted RBP13.4□□□□□ -0.26
SRPRA-203ENST00000528744 TRIM71Q2Q1W2 868 aaKnown RBP13.4□□□□□ -0.26
SRPRA-203ENST00000528744 BRDTQ58F21 947 aaPredicted RBP13.4□□□□□ -0.26
SRPRA-203ENST00000528744 CELF3Q5SZQ8 465 aaKnown RBP13.4□□□□□ -0.26
SRPRA-203ENST00000528744 DHX37Q8IY37 1157 aaKnown RBP13.4□□□□□ -0.26
SRPRA-203ENST00000528744 SRBD1Q8N5C6 995 aaKnown RBP13.4□□□□□ -0.26
SRPRA-203ENST00000528744 LRRC2Q9BYS8 371 aa13.4□□□□□ -0.26
SRPRA-203ENST00000528744 RTEL1Q9NZ71 1219 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms