RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 MTA3Q9BTC8 594 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 KATNBL1Q9H079 304 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 PXMP2Q9NR77 195 aa10.48□□□□□ -0.73
CMTM1-210ENST00000528441 RBM28Q9NW13 759 aaKnown RBP10.48□□□□□ -0.73
CMTM1-210ENST00000528441 GNEQ9Y223 722 aaKnown RBP10.48□□□□□ -0.73
CMTM1-210ENST00000528441 KLF18A0A0U1RQI7 1052 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 hCG_1642624A0A1W2PR95 340 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 SLC34A2O95436 690 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 GH1P01241 217 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 NR3C2P08235 984 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 BMP8BP34820 402 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 LIFRP42702 1097 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 AKAP17AQ02040 695 aaKnown RBP10.47□□□□□ -0.73
CMTM1-210ENST00000528441 FPGSQ05932 587 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 SNX17Q15036 470 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 DHX32Q7L7V1 743 aaKnown RBP10.47□□□□□ -0.73
CMTM1-210ENST00000528441 DHX37Q8IY37 1157 aaKnown RBP10.47□□□□□ -0.73
CMTM1-210ENST00000528441 ZFP91Q96JP5 570 aaPredicted RBP10.47□□□□□ -0.73
CMTM1-210ENST00000528441 MTG1Q9BT17 334 aaPredicted RBP10.47□□□□□ -0.73
CMTM1-210ENST00000528441 RIOX1Q9H6W3 641 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 EHMT1Q9H9B1 1298 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 COL20A1Q9P218 1284 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 Q9Y3F1 56 aa10.47□□□□□ -0.73
CMTM1-210ENST00000528441 TRIM43BA6NCK2 446 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 SPDYE3A6NKU9 549 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 NOP56O00567 594 aaKnown RBP10.46□□□□□ -0.73
CMTM1-210ENST00000528441 PPP1R11O60927 126 aaPredicted RBP10.46□□□□□ -0.73
CMTM1-210ENST00000528441 EIF3JO75822 258 aaKnown RBP10.46□□□□□ -0.73
CMTM1-210ENST00000528441 PSMA5P28066 241 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 METAP2P50579 478 aaKnown RBP eCLIP10.46□□□□□ -0.73
CMTM1-210ENST00000528441 LY6KQ17RY6 165 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 GNPTABQ3T906 1256 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 TMEM63BQ5T3F8 832 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 C1orf53Q5VUE5 145 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 TMEM199Q8N511 208 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 FANCBQ8NB91 859 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 MORC4Q8TE76 937 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 TRIM43Q96BQ3 446 aaPredicted RBP10.46□□□□□ -0.73
CMTM1-210ENST00000528441 LRCH3Q96II8 777 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 RNPC3Q96LT9 517 aaKnown RBP10.46□□□□□ -0.73
CMTM1-210ENST00000528441 MAP3K14Q99558 947 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 SPZ1Q9BXG8 430 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 MAF1Q9H063 256 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 MLXIPQ9HAP2 919 aa10.46□□□□□ -0.73
CMTM1-210ENST00000528441 MAP3K20Q9NYL2 800 aaKnown RBP10.46□□□□□ -0.73
CMTM1-210ENST00000528441 TRIOBPQ9H2D6 2365 aa10.46□□□□□ -0.74
CMTM1-210ENST00000528441 CYTH3O43739 400 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 KPNA6O60684 536 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 SEC24BO95487 1268 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 CASTP20810 708 aaKnown RBP10.45□□□□□ -0.74
CMTM1-210ENST00000528441 EDNRBP24530 442 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 HSD17B4P51659 736 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 NAPAP54920 295 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 SP4Q02446 784 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 PPIGQ13427 754 aaKnown RBP eCLIP10.45□□□□□ -0.74
CMTM1-210ENST00000528441 PGM5Q15124 567 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 ADCK5Q3MIX3 580 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 Q6ZUG5 572 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 SRBD1Q8N5C6 995 aaKnown RBP10.45□□□□□ -0.74
CMTM1-210ENST00000528441 SAMD3Q8N6K7 520 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 AFG1LQ8WV93 481 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 GPKOWQ92917 476 aaPredicted RBP eCLIP10.45□□□□□ -0.74
CMTM1-210ENST00000528441 TOX2Q96NM4 488 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 PDCD2LQ9BRP1 358 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 ALG1Q9BT22 464 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 HIPK3Q9H422 1215 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 RTEL1Q9NZ71 1219 aa10.45□□□□□ -0.74
CMTM1-210ENST00000528441 LTBP2Q14767 1821 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 CCDC196A0A1B0GTZ2 297 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 ZBBXA8MT70 800 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 ARIH2O95376 493 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 GGPS1O95749 300 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 TIMP1P01033 207 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 MMP3P08254 477 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 SUPT20HL2P0C7V6 817 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 CPA1P15085 419 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 CCL23P55773 120 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 APOBRQ0VD83 1088 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 FAAP100Q0VG06 881 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 DGKDQ16760 1214 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 CCSAPQ6IQ19 270 aaPredicted RBP10.44□□□□□ -0.74
CMTM1-210ENST00000528441 KCNV1Q6PIU1 500 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 APOA5Q6Q788 366 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 TMTC3Q6ZXV5 915 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 ANKRD33Q7Z3H0 272 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 NLRX1Q86UT6 975 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 FAM126BQ8IXS8 530 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 PPP1R13LQ8WUF5 828 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 BRF1Q92994 677 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 MTMR8Q96EF0 704 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 SPATA33Q96N06 139 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 KATNAL1Q9BW62 490 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 SEZ6LQ9BYH1 1024 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 MTIF3Q9H2K0 278 aaKnown RBP10.44□□□□□ -0.74
CMTM1-210ENST00000528441 PSTPIP2Q9H939 334 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 GTF3C3Q9Y5Q9 886 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 MYH7BA7E2Y1 1941 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 KIAA1217Q5T5P2 1943 aa10.44□□□□□ -0.74
CMTM1-210ENST00000528441 RBM47A0AV96 593 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms