RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	MEIS2	O14770	477 aa		13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	EPB41L2	O43491	1005 aa	Known RBP	13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	MYL3	P08590	195 aa		13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	MYCL	P12524	364 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	ARHGAP1	Q07960	439 aa		13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	RTN1	Q16799	776 aa		13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	USP17L6P	Q6QN14	398 aa		13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	BLOC1S2	Q6QNY1	142 aa		13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	POLR3E	Q9NVU0	708 aa		13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	RBM28	Q9NW13	759 aa	Known RBP	13.57	□□□□□ -0.24
PSMC3-205	ENST00000528362	PIK3CD	O00329	1044 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	GH1	P01241	217 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	CD4	P01730	458 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	RAG1	P15918	1043 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	RPS6KB1	P23443	525 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	CDC27	P30260	824 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	CCND2	P30279	289 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	RCAN1	P53805	252 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	APOBR	Q0VD83	1088 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	LRIT3	Q3SXY7	679 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	BRDT	Q58F21	947 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362		Q6ZUG5	572 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	AFG1L	Q8WV93	481 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	BRF1	Q92994	677 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	LRCH3	Q96II8	777 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	ZFP91	Q96JP5	570 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	MTG1	Q9BT17	334 aa	Predicted RBP	13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	USP26	Q9BXU7	913 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	DDX41	Q9UJV9	622 aa	Known RBP	13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	MRVI1	Q9Y6F6	885 aa		13.56	□□□□□ -0.24
PSMC3-205	ENST00000528362	MMP3	P08254	477 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	CAST	P20810	708 aa	Known RBP	13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	EPHB4	P54760	987 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	MRPS9	P82933	396 aa	Known RBP	13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	FGD1	P98174	961 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	C9orf50	Q5SZB4	431 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	WWC2	Q6AWC2	1192 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	HEATR3	Q7Z4Q2	680 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	FBXL16	Q8N461	479 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	CUL5	Q93034	780 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	SEZ6L	Q9BYH1	1024 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	AGXT2	Q9BYV1	514 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	TRPV6	Q9H1D0	765 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	PSTPIP2	Q9H939	334 aa		13.55	□□□□□ -0.24
PSMC3-205	ENST00000528362	TLR3	O15455	904 aa	Known RBP	13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	B4GALT4	O60513	344 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	KPNA6	O60684	536 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	TIMP1	P01033	207 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	UBA1	P22314	1058 aa	Known RBP	13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	PSMA5	P28066	241 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	METAP2	P50579	478 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	SP2	Q02086	613 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	SHH	Q15465	462 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	UBE2S	Q16763	222 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	TYW1B	Q6NUM6	668 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	SMARCC2	Q8TAQ2	1214 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	PPP1R13L	Q8WUF5	828 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	EMID1	Q96A84	441 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	INPP4A	Q96PE3	977 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362		V9GY48	417 aa	Predicted RBP	13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	NID2	Q14112	1375 aa		13.54	□□□□□ -0.24
PSMC3-205	ENST00000528362	ADD1	P35611	737 aa	Known RBP	13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	SEMA3F	Q13275	785 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	LAMC2	Q13753	1193 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	NBPF20	Q3BBV1	942 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	CELF3	Q5SZQ8	465 aa	Known RBP	13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	PCNX4	Q63HM2	1172 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	KCNV1	Q6PIU1	500 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	DHX37	Q8IY37	1157 aa	Known RBP	13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	PPTC7	Q8NI37	304 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	KAT2B	Q92831	832 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	PPP1R12C	Q9BZL4	782 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	ZSWIM6	Q9HCJ5	1215 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	TRMT13	Q9NUP7	481 aa	Known RBP	13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	BAZ2B	Q9UIF8	2168 aa	Known RBP	13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	LTBP2	Q14767	1821 aa		13.53	□□□□□ -0.24
PSMC3-205	ENST00000528362	STXBP3	O00186	592 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	SORBS3	O60504	671 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	STAM2	O75886	525 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	GGPS1	O95749	300 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	TGFB3	P10600	412 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	HOXD8	P13378	290 aa	Predicted RBP	13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	CYP2C18	P33260	490 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	EVC	P57679	992 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	FPGS	Q05932	587 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	DGKD	Q16760	1214 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	GNPTAB	Q3T906	1256 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	MYSM1	Q5VVJ2	828 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	MFSD5	Q6N075	450 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	NFRKB	Q6P4R8	1299 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	RUFY3	Q7L099	469 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	NOC4L	Q9BVI4	516 aa	Known RBP	13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	HIPK3	Q9H422	1215 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	RTEL1	Q9NZ71	1219 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	UMODL1	Q5DID0	1318 aa		13.52	□□□□□ -0.25
PSMC3-205	ENST00000528362	CCDC196	A0A1B0GTZ2	297 aa		13.51	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms