RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 IQCF3P0C7M6 154 aa30.06■■■□□ 2.4
TRIM3-206ENST00000528227 ATP2A2P16615 1042 aaKnown RBP30.06■■■□□ 2.4
TRIM3-206ENST00000528227 CHMP4BP1P59074 171 aa30.06■■■□□ 2.4
TRIM3-206ENST00000528227 GRM4Q14833 912 aa30.06■■■□□ 2.4
TRIM3-206ENST00000528227 SLC35G1Q2M3R5 365 aa30.06■■■□□ 2.4
TRIM3-206ENST00000528227 SESTD1Q86VW0 696 aa30.06■■■□□ 2.4
TRIM3-206ENST00000528227 RETREG2Q8NC44 543 aa30.06■■■□□ 2.4
TRIM3-206ENST00000528227 EMID1Q96A84 441 aaPredicted RBP30.06■■■□□ 2.4
TRIM3-206ENST00000528227 MAP3K20Q9NYL2 800 aaKnown RBP30.06■■■□□ 2.4
TRIM3-206ENST00000528227 NOD1Q9Y239 953 aa30.06■■■□□ 2.4
TRIM3-206ENST00000528227 PCDHA11Q9Y5I1 949 aa30.06■■■□□ 2.4
TRIM3-206ENST00000528227 CASTP20810 708 aaKnown RBP30.05■■■□□ 2.4
TRIM3-206ENST00000528227 BFSP2Q13515 415 aa30.05■■■□□ 2.4
TRIM3-206ENST00000528227 ADGRE1Q14246 886 aa30.05■■■□□ 2.4
TRIM3-206ENST00000528227 PTGISQ16647 500 aa30.05■■■□□ 2.4
TRIM3-206ENST00000528227 MRVI1Q9Y6F6 885 aa30.05■■■□□ 2.4
TRIM3-206ENST00000528227 TAF6LQ9Y6J9 622 aa30.05■■■□□ 2.4
TRIM3-206ENST00000528227 IFIT3O14879 490 aaKnown RBP30.04■■■□□ 2.4
TRIM3-206ENST00000528227 MYOGP15173 224 aa30.04■■■□□ 2.4
TRIM3-206ENST00000528227 DGKDQ16760 1214 aa30.04■■■□□ 2.4
TRIM3-206ENST00000528227 STOX1Q6ZVD7 989 aa30.04■■■□□ 2.4
TRIM3-206ENST00000528227 CTAGE1Q96RT6 745 aa30.04■■■□□ 2.4
TRIM3-206ENST00000528227 PDCD2LQ9BRP1 358 aa30.04■■■□□ 2.4
TRIM3-206ENST00000528227 RIOX1Q9H6W3 641 aa30.04■■■□□ 2.4
TRIM3-206ENST00000528227 SENP2Q9HC62 589 aa30.04■■■□□ 2.4
TRIM3-206ENST00000528227 E7EWF7 191 aa30.03■■■□□ 2.4
TRIM3-206ENST00000528227 ACTN1P12814 892 aa30.03■■■□□ 2.4
TRIM3-206ENST00000528227 GDF6Q6KF10 455 aaPredicted RBP30.03■■■□□ 2.4
TRIM3-206ENST00000528227 RALYLQ86SE5 291 aaKnown RBP30.03■■■□□ 2.4
TRIM3-206ENST00000528227 HOMER1Q86YM7 354 aa30.03■■■□□ 2.4
TRIM3-206ENST00000528227 SAMD3Q8N6K7 520 aa30.03■■■□□ 2.4
TRIM3-206ENST00000528227 PIGSQ96S52 555 aa30.03■■■□□ 2.4
TRIM3-206ENST00000528227 VCANP13611 3396 aa30.03■■■□□ 2.4
TRIM3-206ENST00000528227 ERICH2A1L162 156 aa30.02■■■□□ 2.4
TRIM3-206ENST00000528227 SGSM2O43147 1006 aa30.02■■■□□ 2.4
TRIM3-206ENST00000528227 RGS20O76081 388 aa30.02■■■□□ 2.4
TRIM3-206ENST00000528227 HOXA13P31271 388 aaPredicted RBP30.02■■■□□ 2.4
TRIM3-206ENST00000528227 LAMC2Q13753 1193 aa30.02■■■□□ 2.4
TRIM3-206ENST00000528227 PPP2R2DQ66LE6 453 aa30.02■■■□□ 2.4
TRIM3-206ENST00000528227 NCOA7Q8NI08 942 aa30.02■■■□□ 2.4
TRIM3-206ENST00000528227 MYCLP12524 364 aaPredicted RBP30.01■■■□□ 2.39
TRIM3-206ENST00000528227 IRX6P78412 446 aaPredicted RBP30.01■■■□□ 2.39
TRIM3-206ENST00000528227 TROAPQ12815 778 aa30.01■■■□□ 2.39
TRIM3-206ENST00000528227 WTAPQ15007 396 aa30.01■■■□□ 2.39
TRIM3-206ENST00000528227 CCDC155Q8N6L0 562 aa30.01■■■□□ 2.39
TRIM3-206ENST00000528227 PPTC7Q8NI37 304 aa30.01■■■□□ 2.39
TRIM3-206ENST00000528227 CAGE1Q8TC20 777 aa30.01■■■□□ 2.39
TRIM3-206ENST00000528227 PPM1EQ8WY54 764 aa30.01■■■□□ 2.39
TRIM3-206ENST00000528227 CYTH3O43739 400 aa30■■■□□ 2.39
TRIM3-206ENST00000528227 TRAF1Q13077 416 aa30■■■□□ 2.39
TRIM3-206ENST00000528227 PGM5Q15124 567 aa30■■■□□ 2.39
TRIM3-206ENST00000528227 DHX37Q8IY37 1157 aaKnown RBP30■■■□□ 2.39
TRIM3-206ENST00000528227 AFAP1L1Q8TED9 768 aa30■■■□□ 2.39
TRIM3-206ENST00000528227 FTOQ9C0B1 505 aaKnown RBP eCLIP30■■■□□ 2.39
TRIM3-206ENST00000528227 PRDM6Q9NQX0 595 aa30■■■□□ 2.39
TRIM3-206ENST00000528227 GTF2IRD1Q9UHL9 959 aa30■■■□□ 2.39
TRIM3-206ENST00000528227 MYH7BA7E2Y1 1941 aa29.99■■■□□ 2.39
TRIM3-206ENST00000528227 PSEN2P49810 448 aa29.99■■■□□ 2.39
TRIM3-206ENST00000528227 SART3Q15020 963 aaKnown RBP29.99■■■□□ 2.39
TRIM3-206ENST00000528227 VSIG10LQ86VR7 867 aa29.99■■■□□ 2.39
TRIM3-206ENST00000528227 IL31RAQ8NI17 732 aa29.99■■■□□ 2.39
TRIM3-206ENST00000528227 SLC9A7Q96T83 725 aa29.99■■■□□ 2.39
TRIM3-206ENST00000528227 KATNAL1Q9BW62 490 aa29.99■■■□□ 2.39
TRIM3-206ENST00000528227 TRIP12Q14669 1992 aaPredicted RBP29.98■■■□□ 2.39
TRIM3-206ENST00000528227 GCOM1H8Y6P7 765 aaPredicted RBP29.98■■■□□ 2.39
TRIM3-206ENST00000528227 F2P00734 622 aa29.98■■■□□ 2.39
TRIM3-206ENST00000528227 POLR2MP0CAP2 368 aa29.98■■■□□ 2.39
TRIM3-206ENST00000528227 IGFBP4P22692 258 aa29.98■■■□□ 2.39
TRIM3-206ENST00000528227 ANTXR2P58335 489 aa29.98■■■□□ 2.39
TRIM3-206ENST00000528227 TMEM67Q5HYA8 995 aa29.98■■■□□ 2.39
TRIM3-206ENST00000528227 KCNV1Q6PIU1 500 aa29.98■■■□□ 2.39
TRIM3-206ENST00000528227 PHOSPHO2Q8TCD6 241 aa29.98■■■□□ 2.39
TRIM3-206ENST00000528227 DHX38Q92620 1227 aaKnown RBP29.98■■■□□ 2.39
TRIM3-206ENST00000528227 SYMPKQ92797 1274 aaKnown RBP29.98■■■□□ 2.39
TRIM3-206ENST00000528227 MAP4K1Q92918 833 aa29.98■■■□□ 2.39
TRIM3-206ENST00000528227 HDAC6Q9UBN7 1215 aa29.98■■■□□ 2.39
TRIM3-206ENST00000528227 SPTBN5Q9NRC6 3674 aaKnown RBP29.98■■■□□ 2.39
TRIM3-206ENST00000528227 PNMA6FA0A0J9YX94 578 aa29.97■■■□□ 2.39
TRIM3-206ENST00000528227 HAS3O00219 553 aa29.97■■■□□ 2.39
TRIM3-206ENST00000528227 ZNF286BP0CG31 522 aa29.97■■■□□ 2.39
TRIM3-206ENST00000528227 HOXD8P13378 290 aaPredicted RBP29.97■■■□□ 2.39
TRIM3-206ENST00000528227 RBL2Q08999 1139 aa29.97■■■□□ 2.39
TRIM3-206ENST00000528227 MFSD10Q14728 455 aa29.97■■■□□ 2.39
TRIM3-206ENST00000528227 MYSM1Q5VVJ2 828 aa29.97■■■□□ 2.39
TRIM3-206ENST00000528227 C7orf31Q8N865 590 aa29.97■■■□□ 2.39
TRIM3-206ENST00000528227 CHD7Q9P2D1 2997 aa29.96■■■□□ 2.39
TRIM3-206ENST00000528227 KIAA0753Q2KHM9 967 aa29.96■■■□□ 2.39
TRIM3-206ENST00000528227 TJAP1Q5JTD0 557 aa29.96■■■□□ 2.39
TRIM3-206ENST00000528227 CELF3Q5SZQ8 465 aaKnown RBP29.96■■■□□ 2.39
TRIM3-206ENST00000528227 CATIPQ7Z7H3 387 aa29.96■■■□□ 2.39
TRIM3-206ENST00000528227 MB21D2Q8IYB1 491 aaPredicted RBP29.96■■■□□ 2.39
TRIM3-206ENST00000528227 IGDCC4Q8TDY8 1250 aa29.96■■■□□ 2.39
TRIM3-206ENST00000528227 ALG1Q9BT22 464 aa29.96■■■□□ 2.39
TRIM3-206ENST00000528227 TET1Q8NFU7 2136 aa29.96■■■□□ 2.39
TRIM3-206ENST00000528227 MYO9BQ13459 2157 aa29.96■■■□□ 2.39
TRIM3-206ENST00000528227 BAIAP3O94812 1187 aa29.95■■■□□ 2.39
TRIM3-206ENST00000528227 CA3P07451 260 aa29.95■■■□□ 2.39
TRIM3-206ENST00000528227 SELPP16109 830 aa29.95■■■□□ 2.39
TRIM3-206ENST00000528227 CCND2P30279 289 aa29.95■■■□□ 2.39
TRIM3-206ENST00000528227 SP2Q02086 613 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms