RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 DDX41Q9UJV9 622 aaKnown RBP38.14■■■■□ 3.7
SSSCA1-205ENST00000527920 ARHGAP1Q07960 439 aa38.13■■■■□ 3.69
SSSCA1-205ENST00000527920 LY6KQ17RY6 165 aa38.13■■■■□ 3.69
SSSCA1-205ENST00000527920 KCNV1Q6PIU1 500 aa38.13■■■■□ 3.69
SSSCA1-205ENST00000527920 FCHSD1Q86WN1 690 aa38.13■■■■□ 3.69
SSSCA1-205ENST00000527920 RAB11FIP4Q86YS3 637 aa38.13■■■■□ 3.69
SSSCA1-205ENST00000527920 SNX14Q9Y5W7 946 aa38.13■■■■□ 3.69
SSSCA1-205ENST00000527920 MRVI1Q9Y6F6 885 aa38.13■■■■□ 3.69
SSSCA1-205ENST00000527920 ZBTB43O43298 467 aa38.12■■■■□ 3.69
SSSCA1-205ENST00000527920 MYL3P08590 195 aa38.12■■■■□ 3.69
SSSCA1-205ENST00000527920 CCND2P30279 289 aa38.12■■■■□ 3.69
SSSCA1-205ENST00000527920 PSMC6P62333 389 aa38.12■■■■□ 3.69
SSSCA1-205ENST00000527920 CMTR1Q8N1G2 835 aaKnown RBP38.12■■■■□ 3.69
SSSCA1-205ENST00000527920 IL31RAQ8NI17 732 aa38.12■■■■□ 3.69
SSSCA1-205ENST00000527920 LRCH3Q96II8 777 aa38.12■■■■□ 3.69
SSSCA1-205ENST00000527920 BRPF3Q9ULD4 1205 aa38.12■■■■□ 3.69
SSSCA1-205ENST00000527920 KIAA1217Q5T5P2 1943 aa38.12■■■■□ 3.69
SSSCA1-205ENST00000527920 RGS20O76081 388 aa38.11■■■■□ 3.69
SSSCA1-205ENST00000527920 MYCLP12524 364 aaPredicted RBP38.11■■■■□ 3.69
SSSCA1-205ENST00000527920 FPGSQ05932 587 aa38.11■■■■□ 3.69
SSSCA1-205ENST00000527920 CUL5Q93034 780 aa38.11■■■■□ 3.69
SSSCA1-205ENST00000527920 STAM2O75886 525 aa38.1■■■■□ 3.69
SSSCA1-205ENST00000527920 TGFB3P10600 412 aa38.1■■■■□ 3.69
SSSCA1-205ENST00000527920 MFSD5Q6N075 450 aa38.1■■■■□ 3.69
SSSCA1-205ENST00000527920 FBXL16Q8N461 479 aa38.1■■■■□ 3.69
SSSCA1-205ENST00000527920 RTN1Q16799 776 aa38.09■■■■□ 3.69
SSSCA1-205ENST00000527920 AFG1LQ8WV93 481 aa38.09■■■■□ 3.69
SSSCA1-205ENST00000527920 JAKMIP1Q96N16 626 aaKnown RBP38.09■■■■□ 3.69
SSSCA1-205ENST00000527920 ALDH8A1Q9H2A2 487 aaPredicted RBP38.09■■■■□ 3.69
SSSCA1-205ENST00000527920 SCN10AQ9Y5Y9 1956 aa38.09■■■■□ 3.69
SSSCA1-205ENST00000527920 MEIS2O14770 477 aa38.08■■■■□ 3.69
SSSCA1-205ENST00000527920 LAMC2Q13753 1193 aa38.08■■■■□ 3.69
SSSCA1-205ENST00000527920 SHHQ15465 462 aa38.08■■■■□ 3.69
SSSCA1-205ENST00000527920 BLOC1S2Q6QNY1 142 aa38.08■■■■□ 3.69
SSSCA1-205ENST00000527920 CNTNAP5Q8WYK1 1306 aa38.08■■■■□ 3.69
SSSCA1-205ENST00000527920 KLF18A0A0U1RQI7 1052 aa38.07■■■■□ 3.68
SSSCA1-205ENST00000527920 MMP3P08254 477 aa38.07■■■■□ 3.68
SSSCA1-205ENST00000527920 NFRKBQ6P4R8 1299 aa38.07■■■■□ 3.68
SSSCA1-205ENST00000527920 TEX2Q8IWB9 1127 aa38.07■■■■□ 3.68
SSSCA1-205ENST00000527920 SMARCC2Q8TAQ2 1214 aa38.07■■■■□ 3.68
SSSCA1-205ENST00000527920 B4GALT4O60513 344 aa38.06■■■■□ 3.68
SSSCA1-205ENST00000527920 PSMA5P28066 241 aa38.06■■■■□ 3.68
SSSCA1-205ENST00000527920 FGD1P98174 961 aa38.06■■■■□ 3.68
SSSCA1-205ENST00000527920 FUT2Q10981 343 aa38.06■■■■□ 3.68
SSSCA1-205ENST00000527920 C9orf50Q5SZB4 431 aa38.06■■■■□ 3.68
SSSCA1-205ENST00000527920 XRRA1Q6P2D8 792 aa38.06■■■■□ 3.68
SSSCA1-205ENST00000527920 CCDC82Q8N4S0 544 aa38.06■■■■□ 3.68
SSSCA1-205ENST00000527920 PPTC7Q8NI37 304 aa38.06■■■■□ 3.68
SSSCA1-205ENST00000527920 PSTPIP2Q9H939 334 aa38.06■■■■□ 3.68
SSSCA1-205ENST00000527920 SUPT20HL2P0C7V6 817 aa38.05■■■■□ 3.68
SSSCA1-205ENST00000527920 PTPN11Q06124 597 aaPredicted RBP38.05■■■■□ 3.68
SSSCA1-205ENST00000527920 GNPTABQ3T906 1256 aa38.05■■■■□ 3.68
SSSCA1-205ENST00000527920 USP17L6PQ6QN14 398 aa38.05■■■■□ 3.68
SSSCA1-205ENST00000527920 INPP4AQ96PE3 977 aaPredicted RBP38.05■■■■□ 3.68
SSSCA1-205ENST00000527920 AGXT2Q9BYV1 514 aa38.05■■■■□ 3.68
SSSCA1-205ENST00000527920 TRPV6Q9H1D0 765 aa38.05■■■■□ 3.68
SSSCA1-205ENST00000527920 GOLGA8AA7E2F4 631 aa38.04■■■■□ 3.68
SSSCA1-205ENST00000527920 GOLGA8BA8MQT2 603 aa38.04■■■■□ 3.68
SSSCA1-205ENST00000527920 CASTP20810 708 aaKnown RBP38.04■■■■□ 3.68
SSSCA1-205ENST00000527920 EPHB4P54760 987 aa38.04■■■■□ 3.68
SSSCA1-205ENST00000527920 PPIGQ13427 754 aaKnown RBP eCLIP38.04■■■■□ 3.68
SSSCA1-205ENST00000527920 NBPF20Q3BBV1 942 aa38.04■■■■□ 3.68
SSSCA1-205ENST00000527920 DHX37Q8IY37 1157 aaKnown RBP38.04■■■■□ 3.68
SSSCA1-205ENST00000527920 TMEM199Q8N511 208 aa38.04■■■■□ 3.68
SSSCA1-205ENST00000527920 HIPK3Q9H422 1215 aa38.04■■■■□ 3.68
SSSCA1-205ENST00000527920 HOXD8P13378 290 aaPredicted RBP38.03■■■■□ 3.68
SSSCA1-205ENST00000527920 RPS6KB1P23443 525 aa38.03■■■■□ 3.68
SSSCA1-205ENST00000527920 MRPS9P82933 396 aaKnown RBP38.03■■■■□ 3.68
SSSCA1-205ENST00000527920 DGKDQ16760 1214 aa38.03■■■■□ 3.68
SSSCA1-205ENST00000527920 FAM217BQ9NTX9 383 aaPredicted RBP38.03■■■■□ 3.68
SSSCA1-205ENST00000527920 hCG_1642624A0A1W2PR95 340 aa38.02■■■■□ 3.68
SSSCA1-205ENST00000527920 CPA1P15085 419 aa38.02■■■■□ 3.68
SSSCA1-205ENST00000527920 ICAM3P32942 547 aa38.02■■■■□ 3.68
SSSCA1-205ENST00000527920 CELF3Q5SZQ8 465 aaKnown RBP38.02■■■■□ 3.68
SSSCA1-205ENST00000527920 PCNX4Q63HM2 1172 aa38.02■■■■□ 3.68
SSSCA1-205ENST00000527920 Q6ZUG5 572 aa38.02■■■■□ 3.68
SSSCA1-205ENST00000527920 HEATR3Q7Z4Q2 680 aa38.02■■■■□ 3.68
SSSCA1-205ENST00000527920 NOC4LQ9BVI4 516 aaKnown RBP38.02■■■■□ 3.68
SSSCA1-205ENST00000527920 NID2Q14112 1375 aa38.02■■■■□ 3.68
SSSCA1-205ENST00000527920 CCDC196A0A1B0GTZ2 297 aa38.01■■■■□ 3.68
SSSCA1-205ENST00000527920 hCG_1984214I3L0E3 225 aa38.01■■■■□ 3.68
SSSCA1-205ENST00000527920 MYSM1Q5VVJ2 828 aa38.01■■■■□ 3.68
SSSCA1-205ENST00000527920 PPP1R18Q6NYC8 613 aa38.01■■■■□ 3.68
SSSCA1-205ENST00000527920 ZNF713Q8N859 430 aaPredicted RBP38.01■■■■□ 3.68
SSSCA1-205ENST00000527920 PPP1R12CQ9BZL4 782 aa38.01■■■■□ 3.68
SSSCA1-205ENST00000527920 UBA1P22314 1058 aaKnown RBP38■■■■□ 3.67
SSSCA1-205ENST00000527920 BRF1Q92994 677 aa38■■■■□ 3.67
SSSCA1-205ENST00000527920 SESTD1Q86VW0 696 aa37.99■■■■□ 3.67
SSSCA1-205ENST00000527920 KAT2BQ92831 832 aa37.99■■■■□ 3.67
SSSCA1-205ENST00000527920 USP26Q9BXU7 913 aa37.99■■■■□ 3.67
SSSCA1-205ENST00000527920 TRMT13Q9NUP7 481 aaKnown RBP37.99■■■■□ 3.67
SSSCA1-205ENST00000527920 GGPS1O95749 300 aa37.98■■■■□ 3.67
SSSCA1-205ENST00000527920 CSF2RAP15509 400 aa37.98■■■■□ 3.67
SSSCA1-205ENST00000527920 CDC27P30260 824 aa37.98■■■■□ 3.67
SSSCA1-205ENST00000527920 CYP2C18P33260 490 aa37.98■■■■□ 3.67
SSSCA1-205ENST00000527920 METAP2P50579 478 aaKnown RBP eCLIP37.98■■■■□ 3.67
SSSCA1-205ENST00000527920 SP2Q02086 613 aa37.98■■■■□ 3.67
SSSCA1-205ENST00000527920 APOBRQ0VD83 1088 aa37.98■■■■□ 3.67
SSSCA1-205ENST00000527920 WWC2Q6AWC2 1192 aa37.98■■■■□ 3.67
SSSCA1-205ENST00000527920 GPKOWQ92917 476 aaPredicted RBP eCLIP37.98■■■■□ 3.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms