RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 IRS1P35568 1242 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 NKX3-2P78367 333 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 PDE4DQ08499 809 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 NBPF20Q3BBV1 942 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 RNF207Q6ZRF8 634 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 CHST3Q7LGC8 479 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 RPUSD2Q8IZ73 545 aaKnown RBP11.65□□□□□ -0.54
CAPN1-210ENST00000527699 CLEC4DQ8WXI8 215 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 TBC1D5Q92609 795 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 EVI5LQ96CN4 794 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 VWCEQ96DN2 955 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 FTOQ9C0B1 505 aaKnown RBP eCLIP11.65□□□□□ -0.54
CAPN1-210ENST00000527699 KMT2EQ8IZD2 1858 aa11.65□□□□□ -0.54
CAPN1-210ENST00000527699 LCTP09848 1927 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 TNKSO95271 1327 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 SALL3Q9BXA9 1300 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 LPXNO60711 386 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 ARHGEF15O94989 841 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 TOP1P11387 765 aaKnown RBP11.64□□□□□ -0.55
CAPN1-210ENST00000527699 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
CAPN1-210ENST00000527699 ST3GAL2Q16842 350 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 DUSP28Q4G0W2 176 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 MCMDC2Q4G0Z9 681 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 B4GALNT3Q6L9W6 998 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 BMP8AQ7Z5Y6 402 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 TMCO2Q7Z6W1 182 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-210ENST00000527699 TBC1D10CQ8IV04 446 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 ADSSL1Q8N142 457 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 FBXL6Q8N531 539 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 HELLSQ9NRZ9 838 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 ANAPC4Q9UJX5 808 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 MTUS1Q9ULD2 1270 aa11.64□□□□□ -0.55
CAPN1-210ENST00000527699 CHD6Q8TD26 2715 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 GVINP1Q7Z2Y8 2422 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 ORC4O43929 436 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 ARIH2O95376 493 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 HSPD1P10809 573 aaKnown RBP11.63□□□□□ -0.55
CAPN1-210ENST00000527699 PDHBP11177 359 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 PDE1AP54750 535 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 RPS6P62753 249 aaKnown RBP11.63□□□□□ -0.55
CAPN1-210ENST00000527699 PPP2R5BQ15173 497 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 PPP4R3BQ5MIZ7 849 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 SEPT14Q6ZU15 432 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 SPRED2Q7Z698 418 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 ADHFE1Q8IWW8 467 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 MORC4Q8TE76 937 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 EDAQ92838 391 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 MTG1Q9BT17 334 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-210ENST00000527699 LNPKQ9C0E8 428 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 VAT1LQ9HCJ6 419 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 POLR3EQ9NVU0 708 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 LMCD1Q9NZU5 365 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 ADD3Q9UEY8 706 aaKnown RBP11.63□□□□□ -0.55
CAPN1-210ENST00000527699 PRKAG3Q9UGI9 489 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 RALYQ9UKM9 306 aaKnown RBP11.63□□□□□ -0.55
CAPN1-210ENST00000527699 Q9Y3F1 56 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 ZFHX4Q86UP3 3567 aa11.63□□□□□ -0.55
CAPN1-210ENST00000527699 NEDD4P46934 1319 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 PROB1E7EW31 1015 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 TXNP10599 105 aaKnown RBP11.62□□□□□ -0.55
CAPN1-210ENST00000527699 CPT1AP50416 773 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 RRP1P56182 461 aaKnown RBP11.62□□□□□ -0.55
CAPN1-210ENST00000527699 ZNF543Q08ER8 600 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 LY6KQ17RY6 165 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
CAPN1-210ENST00000527699 BTNL9Q6UXG8 535 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 MFSD6Q6ZSS7 791 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 TRIM67Q6ZTA4 783 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 TAAR1Q96RJ0 339 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 NOD1Q9Y239 953 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 CFAP47Q6ZTR5 3102 aa11.62□□□□□ -0.55
CAPN1-210ENST00000527699 SCN5AQ14524 2016 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 C19orf67A6NJJ6 358 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 DHX16O60231 1041 aaKnown RBP11.61□□□□□ -0.55
CAPN1-210ENST00000527699 NOVP48745 357 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 VCPP55072 806 aaKnown RBP11.61□□□□□ -0.55
CAPN1-210ENST00000527699 ACAP1Q15027 740 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 ALX1Q15699 326 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 RNF135Q8IUD6 432 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 RETREG2Q8NC44 543 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 RMDN1Q96DB5 314 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 ZFP91Q96JP5 570 aaPredicted RBP11.61□□□□□ -0.55
CAPN1-210ENST00000527699 ALG1Q9BT22 464 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 MYO15AQ9UKN7 3530 aa11.61□□□□□ -0.55
CAPN1-210ENST00000527699 MAP1BP46821 2468 aaKnown RBP11.61□□□□□ -0.55
CAPN1-210ENST00000527699 CCDC171Q6TFL3 1326 aa11.6□□□□□ -0.55
CAPN1-210ENST00000527699 RBM47A0AV96 593 aaKnown RBP11.6□□□□□ -0.55
CAPN1-210ENST00000527699 FGRP09769 529 aa11.6□□□□□ -0.55
CAPN1-210ENST00000527699 SUPT20HL2P0C7V6 817 aa11.6□□□□□ -0.55
CAPN1-210ENST00000527699 ACTN1P12814 892 aa11.6□□□□□ -0.55
CAPN1-210ENST00000527699 CDC37Q16543 378 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-210ENST00000527699 FAM117BQ6P1L5 589 aa11.6□□□□□ -0.55
CAPN1-210ENST00000527699 AFG1LQ8WV93 481 aa11.6□□□□□ -0.55
CAPN1-210ENST00000527699 NKD2Q969F2 451 aaPredicted RBP11.6□□□□□ -0.55
CAPN1-210ENST00000527699 SLC9A7Q96T83 725 aa11.6□□□□□ -0.55
CAPN1-210ENST00000527699 POP1Q99575 1024 aaKnown RBP11.6□□□□□ -0.55
CAPN1-210ENST00000527699 TCP11L1Q9NUJ3 509 aa11.6□□□□□ -0.55
CAPN1-210ENST00000527699 COL20A1Q9P218 1284 aa11.6□□□□□ -0.55
CAPN1-210ENST00000527699 B4E1Z4 1266 aa11.59□□□□□ -0.55
CAPN1-210ENST00000527699 NEFLP07196 543 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms