RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 RFXAPO00287 272 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 ZNF213O14771 459 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 BAIAP3O94812 1187 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 ZNF286BP0CG31 522 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 EIF2AK2P19525 551 aaKnown RBP13.69□□□□□ -0.22
CAPN1-204ENST00000526468 COL9A1P20849 921 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 TFF2Q03403 129 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 QRICH1Q2TAL8 776 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 ASPRV1Q53RT3 343 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 B4GALNT3Q6L9W6 998 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 CWC27Q6UX04 472 aaKnown RBP13.69□□□□□ -0.22
CAPN1-204ENST00000526468 HERC6Q8IVU3 1022 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 CAGE1Q8TC20 777 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 AFAP1L1Q8TED9 768 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 NECAB3Q96P71 396 aaPredicted RBP13.69□□□□□ -0.22
CAPN1-204ENST00000526468 COL20A1Q9P218 1284 aa13.69□□□□□ -0.22
CAPN1-204ENST00000526468 WDR81Q562E7 1941 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 PARP1P09874 1014 aaKnown RBP13.68□□□□□ -0.22
CAPN1-204ENST00000526468 SDSP20132 328 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 KCNQ1P51787 676 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 ARHGAP1Q07960 439 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 LY6KQ17RY6 165 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 CCDC178Q5BJE1 867 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 GDF6Q6KF10 455 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-204ENST00000526468 LRRC8DQ7L1W4 858 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 DGKHQ86XP1 1220 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 MCF2L2Q86YR7 1114 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 ADGRF4Q8IZF3 695 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 ENAHQ8N8S7 591 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-204ENST00000526468 SYTL5Q8TDW5 730 aaPredicted RBP13.68□□□□□ -0.22
CAPN1-204ENST00000526468 NSUN6Q8TEA1 469 aaKnown RBP13.68□□□□□ -0.22
CAPN1-204ENST00000526468 RMDN3Q96TC7 470 aa13.68□□□□□ -0.22
CAPN1-204ENST00000526468 KIF28PB7ZC32 967 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 TLL1O43897 1013 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 ARHGEF15O94989 841 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 SELPP16109 830 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 NT5C2P49902 561 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 WDR5P61964 334 aaKnown RBP13.67□□□□□ -0.22
CAPN1-204ENST00000526468 TAP1Q03518 808 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 STXBP2Q15833 593 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 AAK1Q2M2I8 961 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 ARHGEF16Q5VV41 709 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 KRT40Q6A162 431 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 CCDC62Q6P9F0 684 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 FBXO11Q86XK2 927 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 RGS22Q8NE09 1264 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 PHOSPHO2Q8TCD6 241 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 GDPD5Q8WTR4 605 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 TAAR1Q96RJ0 339 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 ZSCAN10Q96SZ4 725 aaPredicted RBP13.67□□□□□ -0.22
CAPN1-204ENST00000526468 UBAC1Q9BSL1 405 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 KATNAL1Q9BW62 490 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 MTCH2Q9Y6C9 303 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 MRVI1Q9Y6F6 885 aa13.67□□□□□ -0.22
CAPN1-204ENST00000526468 MYH9P35579 1960 aaKnown RBP13.66□□□□□ -0.22
CAPN1-204ENST00000526468 CFBP00751 764 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
CAPN1-204ENST00000526468 DGKDQ16760 1214 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 IMMTQ16891 758 aaKnown RBP13.66□□□□□ -0.22
CAPN1-204ENST00000526468 TMCO2Q7Z6W1 182 aaPredicted RBP13.66□□□□□ -0.22
CAPN1-204ENST00000526468 SESTD1Q86VW0 696 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 C7orf31Q8N865 590 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 TBC1D5Q92609 795 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 DHX38Q92620 1227 aaKnown RBP13.66□□□□□ -0.22
CAPN1-204ENST00000526468 KAT2BQ92831 832 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 CTAGE1Q96RT6 745 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 ALG1Q9BT22 464 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 PXMP2Q9NR77 195 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 RAPGEFL1Q9UHV5 662 aa13.66□□□□□ -0.22
CAPN1-204ENST00000526468 MRPL11Q9Y3B7 192 aaKnown RBP13.66□□□□□ -0.22
CAPN1-204ENST00000526468 MUC6Q6W4X9 2439 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 HIP1O00291 1037 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 SORBS3O60504 671 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 PSEN2P49810 448 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 DEFB103AP81534 67 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 GRB10Q13322 594 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 MFSD10Q14728 455 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 IFIT1BQ5T764 474 aaKnown RBP13.65□□□□□ -0.22
CAPN1-204ENST00000526468 CNKSR3Q6P9H4 555 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 SPRED2Q7Z698 418 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 CHD1LQ86WJ1 897 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 SMC5Q8IY18 1101 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 IWS1Q96ST2 819 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 ZBED2Q9BTP6 218 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 MAF1Q9H063 256 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 VAT1LQ9HCJ6 419 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 GTF2IRD1Q9UHL9 959 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 MTUS1Q9ULD2 1270 aa13.65□□□□□ -0.22
CAPN1-204ENST00000526468 LCHNA4D1U4 455 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 F2P00734 622 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 MYCLP12524 364 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-204ENST00000526468 RBL2Q08999 1139 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 KIAA0753Q2KHM9 967 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 PPTC7Q8NI37 304 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 DSCC1Q9BVC3 393 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 AMNQ9BXJ7 453 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 KRT23Q9C075 422 aa13.64□□□□□ -0.23
CAPN1-204ENST00000526468 RWDD1Q9H446 243 aaPredicted RBP13.64□□□□□ -0.23
CAPN1-204ENST00000526468 CNNM2Q9H8M5 875 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms