RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PMLP29590 882 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 MC3RP41968 323 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 KCNJ6P48051 423 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 RBM10P98175 930 aaKnown RBP5.7□□□□□ -1.5
CD44-219ENST00000525685 FOXO4P98177 505 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 HSP90AA2PQ14568 343 aaPredicted RBP5.7□□□□□ -1.5
CD44-219ENST00000525685 SLC10A6Q3KNW5 377 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 WWC2Q6AWC2 1192 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 ZNF227Q86WZ6 799 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 NLGN1Q8N2Q7 840 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 NPLOC4Q8TAT6 608 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 PLEKHO2Q8TD55 490 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 FNIP1Q8TF40 1166 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 BTN2A2Q8WVV5 523 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 CDC6Q99741 560 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 NUDT5Q9UKK9 219 aa5.7□□□□□ -1.5
CD44-219ENST00000525685 FFAR3O14843 346 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 SASH1O94885 1247 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 FUCA1P04066 466 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 HTRA3P83110 453 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 SLC9A5Q14940 896 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 INF2Q27J81 1249 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 VWA3BQ502W6 1294 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 SPATC1Q76KD6 591 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 SP8Q8IXZ3 490 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 USP33Q8TEY7 942 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 LUC7LQ9NQ29 371 aaKnown RBP5.69□□□□□ -1.5
CD44-219ENST00000525685 MARCH2Q9P0N8 246 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 MSRB2Q9Y3D2 182 aa5.69□□□□□ -1.5
CD44-219ENST00000525685 BAZ1AQ9NRL2 1556 aaPredicted RBP5.68□□□□□ -1.5
CD44-219ENST00000525685 OTOL1A6NHN0 477 aaPredicted RBP5.68□□□□□ -1.5
CD44-219ENST00000525685 ARNTLO00327 626 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 ZBTB7AO95365 584 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 NTRK1P04629 796 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 SCG5P05408 212 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 HOXC12P31275 282 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 RASA3Q14644 834 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 B3GNT8Q7Z7M8 397 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 NOP9Q86U38 636 aaKnown RBP5.68□□□□□ -1.5
CD44-219ENST00000525685 FEZF2Q8TBJ5 459 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 CPA5Q8WXQ8 436 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 SGSM3Q96HU1 749 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 SPATA9Q9BWV2 254 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 RTEL1Q9NZ71 1219 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 FAN1Q9Y2M0 1017 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 SIT1Q9Y3P8 196 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 PMF1-BGLAPU3KQ54 211 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 NCANO14594 1321 aa5.68□□□□□ -1.5
CD44-219ENST00000525685 TRAV20A0A0B4J274 112 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 SNRPB2P08579 225 aaKnown RBP5.67□□□□□ -1.5
CD44-219ENST00000525685 ECI1P42126 302 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 DLX2Q07687 328 aaPredicted RBP5.67□□□□□ -1.5
CD44-219ENST00000525685 TESK1Q15569 626 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 E4F1Q66K89 784 aaPredicted RBP5.67□□□□□ -1.5
CD44-219ENST00000525685 IQCEQ6IPM2 695 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 SAPCD2Q86UD0 394 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 CCDC103Q8IW40 242 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 TEX2Q8IWB9 1127 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 SYT8Q8NBV8 401 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 KREMEN2Q8NCW0 462 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 ZNF669Q96BR6 464 aaPredicted RBP5.67□□□□□ -1.5
CD44-219ENST00000525685 PIF1Q9H611 641 aa5.67□□□□□ -1.5
CD44-219ENST00000525685 TMEFF2Q9UIK5 374 aaPredicted RBP5.67□□□□□ -1.5
CD44-219ENST00000525685 A0A1W2PQU0 124 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 B8ZZF3 427 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 C22orf46C9J442 243 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 PRRG2O14669 202 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 CAPNS1P04632 268 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 PPP2R2AP63151 447 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 CACNB2Q08289 660 aaPredicted RBP5.66□□□□□ -1.5
CD44-219ENST00000525685 KCNAB2Q13303 367 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 SF1Q15637 639 aaKnown RBP5.66□□□□□ -1.5
CD44-219ENST00000525685 ACBD5Q5T8D3 534 aaPredicted RBP5.66□□□□□ -1.5
CD44-219ENST00000525685 DCP2Q8IU60 420 aaKnown RBP5.66□□□□□ -1.5
CD44-219ENST00000525685 RELTQ969Z4 430 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 CCDC140Q96MF4 163 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 AARSD1Q9BTE6 412 aaKnown RBP5.66□□□□□ -1.5
CD44-219ENST00000525685 TMA7Q9Y2S6 64 aaKnown RBP5.66□□□□□ -1.5
CD44-219ENST00000525685 MROH2BQ7Z745 1585 aa5.66□□□□□ -1.5
CD44-219ENST00000525685 SH3D21A4FU49 640 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 SGSM2O43147 1006 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 PRODHO43272 600 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 DIAPH1O60610 1272 aaKnown RBP5.65□□□□□ -1.5
CD44-219ENST00000525685 CPP00450 1065 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 APPP05067 770 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 SLURP1P55000 103 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 GFRA1P56159 465 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 RPL11P62913 178 aaKnown RBP5.65□□□□□ -1.5
CD44-219ENST00000525685 NFIXQ14938 502 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 PRSS53Q2L4Q9 553 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 NSMFQ6X4W1 530 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 LIPIQ6XZB0 460 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 NLRP10Q86W26 655 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 ADGRG2Q8IZP9 1017 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 Q8N1Y9 231 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 SMARCC2Q8TAQ2 1214 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 DIO2Q92813 273 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 C1orf159Q96HA4 380 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 NOX5Q96PH1 765 aa5.65□□□□□ -1.5
CD44-219ENST00000525685 IER2Q9BTL4 223 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms