RNA–Protein interactions for RNA: ENST00000525378.5

NDUFS3-204, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2

Gene NDUFS3, Length 779 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-204ENST00000525378 RETREG2Q8NC44 543 aa13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 IWS1Q96ST2 819 aa13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 UBAC1Q9BSL1 405 aa13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 CNNM2Q9H8M5 875 aa13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 PXMP2Q9NR77 195 aa13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 THEGQ9P2T0 379 aa13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 CTNNA3Q9UI47 895 aa13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 DDX41Q9UJV9 622 aaKnown RBP13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 NOD1Q9Y239 953 aa13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
NDUFS3-204ENST00000525378 RFXAPO00287 272 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 ARHGEF15O94989 841 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 CA3P07451 260 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 NR3C2P08235 984 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 ACTN1P12814 892 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 GSPT1P15170 499 aaKnown RBP13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 HSD17B4P51659 736 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 BFSP2Q13515 415 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 GPNMBQ14956 572 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 SLC35G1Q2M3R5 365 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 TMEM67Q5HYA8 995 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 SESTD1Q86VW0 696 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 ATXN2LQ8WWM7 1075 aaKnown RBP13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 DHX38Q92620 1227 aaKnown RBP13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 MTMR8Q96EF0 704 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 SLC9A7Q96T83 725 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 AMNQ9BXJ7 453 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 FTOQ9C0B1 505 aaKnown RBP eCLIP13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
NDUFS3-204ENST00000525378 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 EPOPA6NHQ4 379 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 KLRF2D3W0D1 207 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 EIF3JO75822 258 aaKnown RBP13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 RGS20O76081 388 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 CASTP20810 708 aaKnown RBP13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 GHRHRQ02643 423 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 MICALL1Q8N3F8 863 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 ASB2Q96Q27 587 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 CERS4Q9HA82 394 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 HDAC6Q9UBN7 1215 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 GTF2IRD1Q9UHL9 959 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 MRVI1Q9Y6F6 885 aa13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 COL4A4P53420 1690 aaPredicted RBP13.66□□□□□ -0.22
NDUFS3-204ENST00000525378 CHD7Q9P2D1 2997 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 MICAL3Q7RTP6 2002 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 ZBTB5O15062 677 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 SORBS3O60504 671 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 ZNF286BP0CG31 522 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 MYCLP12524 364 aaPredicted RBP13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 HOXA13P31271 388 aaPredicted RBP13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 PSEN2P49810 448 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 PTH1RQ03431 593 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 DGKDQ16760 1214 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 TTC22Q5TAA0 569 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 SPRED2Q7Z698 418 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 HERC6Q8IVU3 1022 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 IL31RAQ8NI17 732 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 CAGE1Q8TC20 777 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 PHOSPHO2Q8TCD6 241 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 AFAP1L1Q8TED9 768 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 EMID1Q96A84 441 aaPredicted RBP13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 PDCD2LQ9BRP1 358 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 ALG1Q9BT22 464 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 SENP2Q9HC62 589 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 CHD9Q3L8U1 2897 aa13.65□□□□□ -0.22
NDUFS3-204ENST00000525378 HAS3O00219 553 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 TNFRSF10AO00220 468 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 CYP21A2P08686 494 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 MRPS5P82675 430 aaKnown RBP13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 TAP1Q03518 808 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 RBL2Q08999 1139 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 PGM5Q15124 567 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 TCTN1Q2MV58 587 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 KRT40Q6A162 431 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 STOX1Q6ZVD7 989 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 TMCO2Q7Z6W1 182 aaPredicted RBP13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 HOMER1Q86YM7 354 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 DHX37Q8IY37 1157 aaKnown RBP13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 CCDC155Q8N6L0 562 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 PPTC7Q8NI37 304 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 WNT8BQ93098 351 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 PIGSQ96S52 555 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 PCDHA1Q9Y5I3 950 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 TAF6LQ9Y6J9 622 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 KAT6AQ92794 2004 aa13.64□□□□□ -0.23
NDUFS3-204ENST00000525378 SIP14410 1827 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 CYTH3O43739 400 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 NBNO60934 754 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 BAIAP3O94812 1187 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 F2P00734 622 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 CKBP12277 381 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 SELPP16109 830 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 WDR5P61964 334 aaKnown RBP13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 ZNF200P98182 395 aaPredicted RBP13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 SP2Q02086 613 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 LAMC2Q13753 1193 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 HIC1Q14526 733 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 MFSD10Q14728 455 aa13.63□□□□□ -0.23
NDUFS3-204ENST00000525378 GRM4Q14833 912 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms