RNA–Protein interactions for RNA: ENST00000524951.5

CSRP1-206, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 2

Gene CSRP1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-206ENST00000524951 GPHNQ9NQX3 736 aaPredicted RBP16.28■□□□□ 0.2
CSRP1-206ENST00000524951 DDX41Q9UJV9 622 aaKnown RBP16.28■□□□□ 0.2
CSRP1-206ENST00000524951 YBX2Q9Y2T7 364 aaKnown RBP16.28■□□□□ 0.2
CSRP1-206ENST00000524951 CFBP00751 764 aa16.27■□□□□ 0.2
CSRP1-206ENST00000524951 COL9A3Q14050 684 aaPredicted RBP16.27■□□□□ 0.2
CSRP1-206ENST00000524951 BRDTQ58F21 947 aaPredicted RBP16.27■□□□□ 0.2
CSRP1-206ENST00000524951 CHST3Q7LGC8 479 aa16.27■□□□□ 0.2
CSRP1-206ENST00000524951 USP38Q8NB14 1042 aa16.27■□□□□ 0.2
CSRP1-206ENST00000524951 IGDCC4Q8TDY8 1250 aa16.27■□□□□ 0.2
CSRP1-206ENST00000524951 PDCD2LQ9BRP1 358 aa16.27■□□□□ 0.2
CSRP1-206ENST00000524951 U3KPZ7 1027 aaPredicted RBP16.27■□□□□ 0.2
CSRP1-206ENST00000524951 DOCK5Q9H7D0 1870 aa16.27■□□□□ 0.19
CSRP1-206ENST00000524951 IFIT3O14879 490 aaKnown RBP16.26■□□□□ 0.19
CSRP1-206ENST00000524951 EIF3JO75822 258 aaKnown RBP16.26■□□□□ 0.19
CSRP1-206ENST00000524951 GH1P01241 217 aa16.26■□□□□ 0.19
CSRP1-206ENST00000524951 PTPN11Q06124 597 aaPredicted RBP16.26■□□□□ 0.19
CSRP1-206ENST00000524951 TRDNQ13061 729 aa16.26■□□□□ 0.19
CSRP1-206ENST00000524951 FAM47CQ5HY64 1035 aa16.26■□□□□ 0.19
CSRP1-206ENST00000524951 ARHGEF16Q5VV41 709 aa16.26■□□□□ 0.19
CSRP1-206ENST00000524951 MB21D2Q8IYB1 491 aaPredicted RBP16.26■□□□□ 0.19
CSRP1-206ENST00000524951 RPUSD2Q8IZ73 545 aaKnown RBP16.26■□□□□ 0.19
CSRP1-206ENST00000524951 EMID1Q96A84 441 aaPredicted RBP16.26■□□□□ 0.19
CSRP1-206ENST00000524951 PIGSQ96S52 555 aa16.26■□□□□ 0.19
CSRP1-206ENST00000524951 PCDHA1Q9Y5I3 950 aa16.26■□□□□ 0.19
CSRP1-206ENST00000524951 PRRC2BQ5JSZ5 2229 aaKnown RBP16.25■□□□□ 0.19
CSRP1-206ENST00000524951 RBAK-RBAKDNI3L0D1 243 aa16.25■□□□□ 0.19
CSRP1-206ENST00000524951 GPNMBQ14956 572 aa16.25■□□□□ 0.19
CSRP1-206ENST00000524951 GDF6Q6KF10 455 aaPredicted RBP16.25■□□□□ 0.19
CSRP1-206ENST00000524951 VSIG10LQ86VR7 867 aa16.25■□□□□ 0.19
CSRP1-206ENST00000524951 SESTD1Q86VW0 696 aa16.25■□□□□ 0.19
CSRP1-206ENST00000524951 NCOA7Q8NI08 942 aa16.25■□□□□ 0.19
CSRP1-206ENST00000524951 IL31RAQ8NI17 732 aa16.25■□□□□ 0.19
CSRP1-206ENST00000524951 NKX2-4Q9H2Z4 354 aa16.25■□□□□ 0.19
CSRP1-206ENST00000524951 PRDM12Q9H4Q4 367 aa16.25■□□□□ 0.19
CSRP1-206ENST00000524951 MAP3K20Q9NYL2 800 aaKnown RBP16.25■□□□□ 0.19
CSRP1-206ENST00000524951 PITPNM1O00562 1244 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 PFKMP08237 780 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 IQCF3P0C7M6 154 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 HOXD8P13378 290 aaPredicted RBP16.24■□□□□ 0.19
CSRP1-206ENST00000524951 MYOGP15173 224 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 HOXA13P31271 388 aaPredicted RBP16.24■□□□□ 0.19
CSRP1-206ENST00000524951 RABGGTBP53611 331 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 ADGRE1Q14246 886 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 WTAPQ15007 396 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 RAB30Q15771 203 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 DEFB128Q7Z7B8 93 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 HOMER1Q86YM7 354 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 SAMD3Q8N6K7 520 aa16.24■□□□□ 0.19
CSRP1-206ENST00000524951 DHX38Q92620 1227 aaKnown RBP16.24■□□□□ 0.19
CSRP1-206ENST00000524951 MTIF3Q9H2K0 278 aaKnown RBP16.24■□□□□ 0.19
CSRP1-206ENST00000524951 RBM8AQ9Y5S9 174 aaKnown RBP16.24■□□□□ 0.19
CSRP1-206ENST00000524951 SP2Q02086 613 aa16.23■□□□□ 0.19
CSRP1-206ENST00000524951 PGM5Q15124 567 aa16.23■□□□□ 0.19
CSRP1-206ENST00000524951 GPKOWQ92917 476 aaPredicted RBP eCLIP16.23■□□□□ 0.19
CSRP1-206ENST00000524951 MSRAQ9UJ68 235 aa16.23■□□□□ 0.19
CSRP1-206ENST00000524951 SLC4A7Q9Y6M7 1214 aa16.23■□□□□ 0.19
CSRP1-206ENST00000524951 PNMA6FA0A0J9YX94 578 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 HAS3O00219 553 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 MYCLP12524 364 aaPredicted RBP16.22■□□□□ 0.19
CSRP1-206ENST00000524951 CASTP20810 708 aaKnown RBP16.22■□□□□ 0.19
CSRP1-206ENST00000524951 PTGISQ16647 500 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 DGKDQ16760 1214 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 TMEM67Q5HYA8 995 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 MYSM1Q5VVJ2 828 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 PPTC7Q8NI37 304 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 ZFP91Q96JP5 570 aaPredicted RBP16.22■□□□□ 0.19
CSRP1-206ENST00000524951 LSG1Q9H089 658 aaKnown RBP16.22■□□□□ 0.19
CSRP1-206ENST00000524951 BCAS3Q9H6U6 928 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 LY9Q9HBG7 655 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 MRVI1Q9Y6F6 885 aa16.22■□□□□ 0.19
CSRP1-206ENST00000524951 FRMPD4Q14CM0 1322 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 BRWD1Q9NSI6 2320 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 ERICH2A1L162 156 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 GCOM1H8Y6P7 765 aaPredicted RBP16.21■□□□□ 0.19
CSRP1-206ENST00000524951 F2P00734 622 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 POLR2MP0CAP2 368 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 RFC2P35250 354 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 CHMP4BP1P59074 171 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 MRPS9P82933 396 aaKnown RBP16.21■□□□□ 0.19
CSRP1-206ENST00000524951 LAMC2Q13753 1193 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 HIC1Q14526 733 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 HSDL1Q3SXM5 330 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 RALYLQ86SE5 291 aaKnown RBP16.21■□□□□ 0.19
CSRP1-206ENST00000524951 DHX37Q8IY37 1157 aaKnown RBP16.21■□□□□ 0.19
CSRP1-206ENST00000524951 MYL10Q9BUA6 226 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 PRDM6Q9NQX0 595 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 HDAC6Q9UBN7 1215 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 GTF2IRD1Q9UHL9 959 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 PCDHA11Q9Y5I1 949 aa16.21■□□□□ 0.19
CSRP1-206ENST00000524951 ZBBXA8MT70 800 aa16.2■□□□□ 0.18
CSRP1-206ENST00000524951 ZNF286BP0CG31 522 aa16.2■□□□□ 0.18
CSRP1-206ENST00000524951 ATP2A2P16615 1042 aaKnown RBP16.2■□□□□ 0.18
CSRP1-206ENST00000524951 PSEN2P49810 448 aa16.2■□□□□ 0.18
CSRP1-206ENST00000524951 RBL2Q08999 1139 aa16.2■□□□□ 0.18
CSRP1-206ENST00000524951 BFSP2Q13515 415 aa16.2■□□□□ 0.18
CSRP1-206ENST00000524951 CELF3Q5SZQ8 465 aaKnown RBP16.2■□□□□ 0.18
CSRP1-206ENST00000524951 TRAF7Q6Q0C0 670 aa16.2■□□□□ 0.18
CSRP1-206ENST00000524951 FCHSD1Q86WN1 690 aa16.2■□□□□ 0.18
CSRP1-206ENST00000524951 SKAP1Q86WV1 359 aa16.2■□□□□ 0.18
CSRP1-206ENST00000524951 ZNF654Q8IZM8 581 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms