RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 TTC28Q96AY4 2481 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
SPARC-206ENST00000524277 PXMP2Q9NR77 195 aa13.77□□□□□ -0.21
SPARC-206ENST00000524277 DDX41Q9UJV9 622 aaKnown RBP13.77□□□□□ -0.21
SPARC-206ENST00000524277 PALM3A6NDB9 673 aaPredicted RBP13.76□□□□□ -0.21
SPARC-206ENST00000524277 CFBP00751 764 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 PPP2R2DQ66LE6 453 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 STOX1Q6ZVD7 989 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 DEFB128Q7Z7B8 93 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 PPTC7Q8NI37 304 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 VWCEQ96DN2 955 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 COL20A1Q9P218 1284 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 MAD2L2Q9UI95 211 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 YBX2Q9Y2T7 364 aaKnown RBP13.76□□□□□ -0.21
SPARC-206ENST00000524277 PCDHA1Q9Y5I3 950 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 MRVI1Q9Y6F6 885 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 EYSQ5T1H1 3165 aa13.76□□□□□ -0.21
SPARC-206ENST00000524277 PPFIA4O75335 1185 aa13.75□□□□□ -0.21
SPARC-206ENST00000524277 EIF2AK2P19525 551 aaKnown RBP13.75□□□□□ -0.21
SPARC-206ENST00000524277 RBL2Q08999 1139 aa13.75□□□□□ -0.21
SPARC-206ENST00000524277 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
SPARC-206ENST00000524277 DHX37Q8IY37 1157 aaKnown RBP13.75□□□□□ -0.21
SPARC-206ENST00000524277 STAG2Q8N3U4 1231 aa13.75□□□□□ -0.21
SPARC-206ENST00000524277 C7orf31Q8N865 590 aa13.75□□□□□ -0.21
SPARC-206ENST00000524277 NCOA7Q8NI08 942 aa13.75□□□□□ -0.21
SPARC-206ENST00000524277 FTOQ9C0B1 505 aaKnown RBP eCLIP13.75□□□□□ -0.21
SPARC-206ENST00000524277 RIOX1Q9H6W3 641 aa13.75□□□□□ -0.21
SPARC-206ENST00000524277 CHD9Q3L8U1 2897 aa13.75□□□□□ -0.21
SPARC-206ENST00000524277 VCANP13611 3396 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 GCOM1H8Y6P7 765 aaPredicted RBP13.74□□□□□ -0.21
SPARC-206ENST00000524277 IFIT3O14879 490 aaKnown RBP13.74□□□□□ -0.21
SPARC-206ENST00000524277 EFCAB14O75071 495 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 STAM2O75886 525 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 POLR2MP0CAP2 368 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 HOXD8P13378 290 aaPredicted RBP13.74□□□□□ -0.21
SPARC-206ENST00000524277 SELPP16109 830 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 POU3F3P20264 500 aaPredicted RBP13.74□□□□□ -0.21
SPARC-206ENST00000524277 IGFBP4P22692 258 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 GRM4Q14833 912 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 CYB5R4Q7L1T6 521 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 CHST3Q7LGC8 479 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 VSIG10LQ86VR7 867 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 USP38Q8NB14 1042 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 KAT2BQ92831 832 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 PDCD2LQ9BRP1 358 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 THEGQ9P2T0 379 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 GTF2IRD1Q9UHL9 959 aa13.74□□□□□ -0.21
SPARC-206ENST00000524277 PNMA6FA0A0J9YX94 578 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 GTPBP6O43824 516 aaPredicted RBP13.73□□□□□ -0.21
SPARC-206ENST00000524277 CYP21A2P08686 494 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
SPARC-206ENST00000524277 CHMLP26374 656 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 CCND2P30279 289 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 KCNJ6P48051 423 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 PSEN2P49810 448 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 RABGGTBP53611 331 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 MRPS5P82675 430 aaKnown RBP13.73□□□□□ -0.21
SPARC-206ENST00000524277 PTK7Q13308 1070 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 ADGRE1Q14246 886 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 WTAPQ15007 396 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 GDF6Q6KF10 455 aaPredicted RBP13.73□□□□□ -0.21
SPARC-206ENST00000524277 CATIPQ7Z7H3 387 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 MAP3K14Q99558 947 aa13.73□□□□□ -0.21
SPARC-206ENST00000524277 HAS3O00219 553 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 OPLAHO14841 1288 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 F2P00734 622 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
SPARC-206ENST00000524277 PDE4AP27815 886 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 SMARCA1P28370 1054 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 CHMP4BP1P59074 171 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 TROAPQ12815 778 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 MFSD10Q14728 455 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 PGM5Q15124 567 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 KIAA0753Q2KHM9 967 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 GNPTABQ3T906 1256 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 CELF3Q5SZQ8 465 aaKnown RBP13.72□□□□□ -0.21
SPARC-206ENST00000524277 MYSM1Q5VVJ2 828 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 LRRC8DQ7L1W4 858 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 HERC6Q8IVU3 1022 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 TMTC2Q8N394 836 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 PPM1EQ8WY54 764 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 ASB2Q96Q27 587 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 IL25Q9H293 177 aa13.72□□□□□ -0.21
SPARC-206ENST00000524277 MYH6P13533 1939 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 ABHD14A-ACY1A0A1B0GW23 586 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 E7EWF7 191 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 SGSM2O43147 1006 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.21
SPARC-206ENST00000524277 CXCL10P02778 98 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 CA3P07451 260 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 AAK1Q2M2I8 961 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 CNKSR3Q6P9H4 555 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 HOMER1Q86YM7 354 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 IL27Q8NEV9 243 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 MAP4K1Q92918 833 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 SPATA33Q96N06 139 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 PIGSQ96S52 555 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 LZTS2Q9BRK4 669 aa13.71□□□□□ -0.21
SPARC-206ENST00000524277 MLXIPQ9HAP2 919 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms