RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 PFKMP08237 780 aa21.85■■□□□ 1.09
PTP4A3-206ENST00000524028 TRDNQ13061 729 aa21.85■■□□□ 1.09
PTP4A3-206ENST00000524028 GRM4Q14833 912 aa21.85■■□□□ 1.09
PTP4A3-206ENST00000524028 STOX1Q6ZVD7 989 aa21.85■■□□□ 1.09
PTP4A3-206ENST00000524028 GAS2L1Q99501 681 aaPredicted RBP21.85■■□□□ 1.09
PTP4A3-206ENST00000524028 SLC28A3Q9HAS3 691 aa21.85■■□□□ 1.09
PTP4A3-206ENST00000524028 PRDM6Q9NQX0 595 aa21.85■■□□□ 1.09
PTP4A3-206ENST00000524028 E7EWF7 191 aa21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 PITPNM1O00562 1244 aa21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 IFIT3O14879 490 aaKnown RBP21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 SGSM2O43147 1006 aa21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 CYTH3O43739 400 aa21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 ATP2A2P16615 1042 aaKnown RBP21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 HOXA13P31271 388 aaPredicted RBP21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 PTGISQ16647 500 aa21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 GDF6Q6KF10 455 aaPredicted RBP21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 HOMER1Q86YM7 354 aa21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 PIGSQ96S52 555 aa21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 PDCD2LQ9BRP1 358 aa21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 RIOX1Q9H6W3 641 aa21.84■■□□□ 1.09
PTP4A3-206ENST00000524028 SPTBN5Q9NRC6 3674 aaKnown RBP21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 CASTP20810 708 aaKnown RBP21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 RFC2P35250 354 aa21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 SESTD1Q86VW0 696 aa21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 RETREG2Q8NC44 543 aa21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 PPM1EQ8WY54 764 aa21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 EMID1Q96A84 441 aaPredicted RBP21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 NOD1Q9Y239 953 aa21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 PCDHA11Q9Y5I1 949 aa21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 MRVI1Q9Y6F6 885 aa21.83■■□□□ 1.09
PTP4A3-206ENST00000524028 MYCLP12524 364 aaPredicted RBP21.82■■□□□ 1.08
PTP4A3-206ENST00000524028 ANTXR2P58335 489 aa21.82■■□□□ 1.08
PTP4A3-206ENST00000524028 TROAPQ12815 778 aa21.82■■□□□ 1.08
PTP4A3-206ENST00000524028 BFSP2Q13515 415 aa21.82■■□□□ 1.08
PTP4A3-206ENST00000524028 DGKDQ16760 1214 aa21.82■■□□□ 1.08
PTP4A3-206ENST00000524028 IL31RAQ8NI17 732 aa21.82■■□□□ 1.08
PTP4A3-206ENST00000524028 DHX38Q92620 1227 aaKnown RBP21.82■■□□□ 1.08
PTP4A3-206ENST00000524028 MAP3K20Q9NYL2 800 aaKnown RBP21.82■■□□□ 1.08
PTP4A3-206ENST00000524028 RBAK-RBAKDNI3L0D1 243 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 LAMC2Q13753 1193 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 GPNMBQ14956 572 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 WTAPQ15007 396 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 PGM5Q15124 567 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 VSIG10LQ86VR7 867 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 NCOA7Q8NI08 942 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 PPTC7Q8NI37 304 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 IGDCC4Q8TDY8 1250 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 MAP4K1Q92918 833 aa21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 ZFP91Q96JP5 570 aaPredicted RBP21.81■■□□□ 1.08
PTP4A3-206ENST00000524028 SCN5AQ14524 2016 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 ERICH2A1L162 156 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 SORBS3O60504 671 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 PSEN2P49810 448 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 PPP2R2DQ66LE6 453 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 RALYLQ86SE5 291 aaKnown RBP21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 DHX37Q8IY37 1157 aaKnown RBP21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 SAMD3Q8N6K7 520 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 ALG1Q9BT22 464 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 FTOQ9C0B1 505 aaKnown RBP eCLIP21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 HDAC6Q9UBN7 1215 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 GTF2IRD1Q9UHL9 959 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 CHD7Q9P2D1 2997 aa21.8■■□□□ 1.08
PTP4A3-206ENST00000524028 PNMA6FA0A0J9YX94 578 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 GCOM1H8Y6P7 765 aaPredicted RBP21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 HAS3O00219 553 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 POLR2MP0CAP2 368 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 ZNF286BP0CG31 522 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 ACTN1P12814 892 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 IGFBP4P22692 258 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 SP2Q02086 613 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 CCDC85BQ15834 202 aaPredicted RBP21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 TMEM67Q5HYA8 995 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 MYSM1Q5VVJ2 828 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 MB21D2Q8IYB1 491 aaPredicted RBP21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 GPKOWQ92917 476 aaPredicted RBP eCLIP21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 GBF1Q92538 1859 aa21.79■■□□□ 1.08
PTP4A3-206ENST00000524028 F2P00734 622 aa21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 CA3P07451 260 aa21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 HOXD8P13378 290 aaPredicted RBP21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 MFSD10Q14728 455 aa21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 HSDL1Q3SXM5 330 aa21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 CELF3Q5SZQ8 465 aaKnown RBP21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 FCHSD1Q86WN1 690 aa21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 C7orf31Q8N865 590 aa21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 CAGE1Q8TC20 777 aa21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 AFAP1L1Q8TED9 768 aa21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 RBM8AQ9Y5S9 174 aaKnown RBP21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 KIAA1217Q5T5P2 1943 aa21.78■■□□□ 1.08
PTP4A3-206ENST00000524028 MYH6P13533 1939 aa21.77■■□□□ 1.08
PTP4A3-206ENST00000524028 COL9A3Q14050 684 aaPredicted RBP21.77■■□□□ 1.08
PTP4A3-206ENST00000524028 HIC1Q14526 733 aa21.77■■□□□ 1.08
PTP4A3-206ENST00000524028 SART3Q15020 963 aaKnown RBP21.77■■□□□ 1.08
PTP4A3-206ENST00000524028 KIAA0753Q2KHM9 967 aa21.77■■□□□ 1.08
PTP4A3-206ENST00000524028 PHOSPHO2Q8TCD6 241 aa21.77■■□□□ 1.08
PTP4A3-206ENST00000524028 PIBF1Q8WXW3 757 aa21.77■■□□□ 1.08
PTP4A3-206ENST00000524028 SLC9A7Q96T83 725 aa21.77■■□□□ 1.08
PTP4A3-206ENST00000524028 BCAS3Q9H6U6 928 aa21.77■■□□□ 1.08
PTP4A3-206ENST00000524028 PPFIA4O75335 1185 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 ARHGEF15O94989 841 aa21.76■■□□□ 1.07
PTP4A3-206ENST00000524028 GGPS1O95749 300 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms