RNA–Protein interactions for RNA: ENST00000523655.1

SREK1-213, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-213ENST00000523655 SV2CQ496J9 727 aa6.86□□□□□ -1.31
SREK1-213ENST00000523655 VWA3BQ502W6 1294 aa6.86□□□□□ -1.31
SREK1-213ENST00000523655 CCDC103Q8IW40 242 aa6.86□□□□□ -1.31
SREK1-213ENST00000523655 LINC01356Q8N9X3 169 aa6.86□□□□□ -1.31
SREK1-213ENST00000523655 PLEKHO2Q8TD55 490 aa6.86□□□□□ -1.31
SREK1-213ENST00000523655 NCANO14594 1321 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 NPHS1O60500 1241 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 DDAH1O94760 285 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 TARBP2Q15633 366 aaKnown RBP6.85□□□□□ -1.31
SREK1-213ENST00000523655 WWC2Q6AWC2 1192 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 NPLOC4Q8TAT6 608 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 RELTQ969Z4 430 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.85□□□□□ -1.31
SREK1-213ENST00000523655 NKX2-4Q9H2Z4 354 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 ZNF408Q9H9D4 720 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 RAPGEFL1Q9UHV5 662 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 FBXL7Q9UJT9 491 aa6.85□□□□□ -1.31
SREK1-213ENST00000523655 SASH1O94885 1247 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 NCAM1P13591 858 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 FPR2P25090 351 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 ZNF227Q86WZ6 799 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 SPATA25Q9BR10 227 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 TINF2Q9BSI4 451 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 CYP26B1Q9NR63 512 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 ST7Q9NRC1 585 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 PPP1R1BQ9UD71 204 aaPredicted RBP6.84□□□□□ -1.31
SREK1-213ENST00000523655 FAN1Q9Y2M0 1017 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 PMF1-BGLAPU3KQ54 211 aa6.84□□□□□ -1.31
SREK1-213ENST00000523655 MAGI1Q96QZ7 1491 aaPredicted RBP6.84□□□□□ -1.31
SREK1-213ENST00000523655 ABCC8Q09428 1581 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 MAPKBP1O60336 1514 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 SUSD5O60279 629 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 FOXD2O60548 495 aaPredicted RBP6.83□□□□□ -1.32
SREK1-213ENST00000523655 FGRP09769 529 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 LCP1P13796 627 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 GRIA2P42262 883 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 SLURP1P55000 103 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 DLX2Q07687 328 aaPredicted RBP6.83□□□□□ -1.32
SREK1-213ENST00000523655 DENND5AQ6IQ26 1287 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 STK32CQ86UX6 486 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 CABP7Q86V35 215 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 VPS37DQ86XT2 251 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 MCF2L2Q86YR7 1114 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 FAM26EQ8N5C1 309 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 SMARCC2Q8TAQ2 1214 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 HNRNPLLQ8WVV9 542 aaKnown RBP6.83□□□□□ -1.32
SREK1-213ENST00000523655 DDX11Q96FC9 970 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 TSPAN17Q96FV3 270 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 MMP19Q99542 508 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.83□□□□□ -1.32
SREK1-213ENST00000523655 LRP2BPQ9P2M1 347 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 PRKAG3Q9UGI9 489 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 RAD54L2Q9Y4B4 1467 aa6.83□□□□□ -1.32
SREK1-213ENST00000523655 C22orf46C9J442 243 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 SGSM2O43147 1006 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 GJB6O95452 261 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 SNRPB2P08579 225 aaKnown RBP6.82□□□□□ -1.32
SREK1-213ENST00000523655 DNAJA1P31689 397 aaKnown RBP6.82□□□□□ -1.32
SREK1-213ENST00000523655 HTRA3P83110 453 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 NFIXQ14938 502 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 POMZP3Q6PJE2 187 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 CELF2-AS1Q8N7Q2 184 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 NETO2Q8NC67 525 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 KREMEN2Q8NCW0 462 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 PEX11GQ96HA9 241 aa6.82□□□□□ -1.32
SREK1-213ENST00000523655 BCL6P41182 706 aa6.81□□□□□ -1.32
SREK1-213ENST00000523655 ZNF143P52747 638 aaPredicted RBP6.81□□□□□ -1.32
SREK1-213ENST00000523655 SMAD4Q13485 552 aaKnown RBP6.81□□□□□ -1.32
SREK1-213ENST00000523655 B3GNT8Q7Z7M8 397 aa6.81□□□□□ -1.32
SREK1-213ENST00000523655 NLRP10Q86W26 655 aa6.81□□□□□ -1.32
SREK1-213ENST00000523655 SPATA6Q9NWH7 488 aaPredicted RBP6.81□□□□□ -1.32
SREK1-213ENST00000523655 PCF11O94913 1555 aaKnown RBP6.81□□□□□ -1.32
SREK1-213ENST00000523655 CEP170Q5SW79 1584 aa6.81□□□□□ -1.32
SREK1-213ENST00000523655 TRBV23OR9-2A0A075B6M9 112 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 PRICKLE3O43900 615 aaPredicted RBP6.8□□□□□ -1.32
SREK1-213ENST00000523655 SOGA1O94964 1423 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 C8BP07358 591 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 KCNJ6P48051 423 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 LIPIQ6XZB0 460 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 CEP68Q76N32 757 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 SAPCD2Q86UD0 394 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 CRACR2BQ8N4Y2 399 aaPredicted RBP6.8□□□□□ -1.32
SREK1-213ENST00000523655 RNF38Q9H0F5 515 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 LUC7LQ9NQ29 371 aaKnown RBP6.8□□□□□ -1.32
SREK1-213ENST00000523655 RTEL1Q9NZ71 1219 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 NUDT5Q9UKK9 219 aa6.8□□□□□ -1.32
SREK1-213ENST00000523655 PTPRMP28827 1452 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 PPM1GO15355 546 aaPredicted RBP6.79□□□□□ -1.32
SREK1-213ENST00000523655 NAT2P11245 290 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 KCNC1P48547 511 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 ARID5AQ03989 594 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 CACNB2Q08289 660 aaPredicted RBP6.79□□□□□ -1.32
SREK1-213ENST00000523655 TNNI3KQ59H18 835 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 SP8Q8IXZ3 490 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 NLGN1Q8N2Q7 840 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 TMEM145Q8NBT3 493 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 RCBTB1Q8NDN9 531 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 ZBTB8AQ96BR9 441 aa6.79□□□□□ -1.32
SREK1-213ENST00000523655 POLA1P09884 1462 aaPredicted RBP6.79□□□□□ -1.32
SREK1-213ENST00000523655 GRIN2BQ13224 1484 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms