RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 CUL5Q93034 780 aa19.91■□□□□ 0.78
CCNC-213ENST00000523541 DDX41Q9UJV9 622 aaKnown RBP19.91■□□□□ 0.78
CCNC-213ENST00000523541 SUPT20HL2P0C7V6 817 aa19.9■□□□□ 0.78
CCNC-213ENST00000523541 CCND2P30279 289 aa19.9■□□□□ 0.78
CCNC-213ENST00000523541 CHMP4BP1P59074 171 aa19.9■□□□□ 0.78
CCNC-213ENST00000523541 PSMC6P62333 389 aa19.9■□□□□ 0.78
CCNC-213ENST00000523541 PTPN11Q06124 597 aaPredicted RBP19.9■□□□□ 0.78
CCNC-213ENST00000523541 LAMC2Q13753 1193 aa19.9■□□□□ 0.78
CCNC-213ENST00000523541 PGM5Q15124 567 aa19.9■□□□□ 0.78
CCNC-213ENST00000523541 ADCK5Q3MIX3 580 aa19.9■□□□□ 0.78
CCNC-213ENST00000523541 TMTC3Q6ZXV5 915 aa19.9■□□□□ 0.78
CCNC-213ENST00000523541 RNPC3Q96LT9 517 aaKnown RBP19.9■□□□□ 0.78
CCNC-213ENST00000523541 LRRC2Q9BYS8 371 aa19.9■□□□□ 0.78
CCNC-213ENST00000523541 GRIN2DO15399 1336 aa19.89■□□□□ 0.77
CCNC-213ENST00000523541 ZBTB43O43298 467 aa19.89■□□□□ 0.77
CCNC-213ENST00000523541 ARIH2O95376 493 aa19.89■□□□□ 0.77
CCNC-213ENST00000523541 PLEKHA8P1O95397 391 aa19.89■□□□□ 0.77
CCNC-213ENST00000523541 HOXA13P31271 388 aaPredicted RBP19.89■□□□□ 0.77
CCNC-213ENST00000523541 COL9A3Q14050 684 aaPredicted RBP19.89■□□□□ 0.77
CCNC-213ENST00000523541 MFSD5Q6N075 450 aa19.89■□□□□ 0.77
CCNC-213ENST00000523541 NFRKBQ6P4R8 1299 aa19.89■□□□□ 0.77
CCNC-213ENST00000523541 MRVI1Q9Y6F6 885 aa19.89■□□□□ 0.77
CCNC-213ENST00000523541 FRMPD4Q14CM0 1322 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 CCDC196A0A1B0GTZ2 297 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 CASTP20810 708 aaKnown RBP19.88■□□□□ 0.77
CCNC-213ENST00000523541 FGD1P98174 961 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 LY6KQ17RY6 165 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 GNPTABQ3T906 1256 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 FAM47CQ5HY64 1035 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 MICU3Q86XE3 530 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 TMEM199Q8N511 208 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 COPS5Q92905 334 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 SNX14Q9Y5W7 946 aa19.88■□□□□ 0.77
CCNC-213ENST00000523541 hCG_1984214I3L0E3 225 aa19.87■□□□□ 0.77
CCNC-213ENST00000523541 EIF5BO60841 1220 aaKnown RBP19.87■□□□□ 0.77
CCNC-213ENST00000523541 MYCLP12524 364 aaPredicted RBP19.87■□□□□ 0.77
CCNC-213ENST00000523541 ARHGAP1Q07960 439 aa19.87■□□□□ 0.77
CCNC-213ENST00000523541 PPIGQ13427 754 aaKnown RBP eCLIP19.87■□□□□ 0.77
CCNC-213ENST00000523541 DGKDQ16760 1214 aa19.87■□□□□ 0.77
CCNC-213ENST00000523541 BLOC1S2Q6QNY1 142 aa19.87■□□□□ 0.77
CCNC-213ENST00000523541 FCHSD1Q86WN1 690 aa19.87■□□□□ 0.77
CCNC-213ENST00000523541 ZNF713Q8N859 430 aaPredicted RBP19.87■□□□□ 0.77
CCNC-213ENST00000523541 SMARCC2Q8TAQ2 1214 aa19.87■□□□□ 0.77
CCNC-213ENST00000523541 FAM161BQ96MY7 647 aa19.87■□□□□ 0.77
CCNC-213ENST00000523541 PSTPIP2Q9H939 334 aa19.87■□□□□ 0.77
CCNC-213ENST00000523541 BAZ2BQ9UIF8 2168 aaKnown RBP19.87■□□□□ 0.77
CCNC-213ENST00000523541 MEIS2O14770 477 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 PPFIA4O75335 1185 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 RXRAP19793 462 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 ICAM3P32942 547 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 RTN1Q16799 776 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 ZNF697Q5TEC3 545 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 DHX37Q8IY37 1157 aaKnown RBP19.86■□□□□ 0.77
CCNC-213ENST00000523541 PPTC7Q8NI37 304 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 JAKMIP1Q96N16 626 aaKnown RBP19.86■□□□□ 0.77
CCNC-213ENST00000523541 GLT8D2Q9H1C3 349 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 TRPV6Q9H1D0 765 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 ALDH8A1Q9H2A2 487 aaPredicted RBP19.86■□□□□ 0.77
CCNC-213ENST00000523541 HIPK3Q9H422 1215 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 BRPF3Q9ULD4 1205 aa19.86■□□□□ 0.77
CCNC-213ENST00000523541 RGS20O76081 388 aa19.85■□□□□ 0.77
CCNC-213ENST00000523541 CYP2C18P33260 490 aa19.85■□□□□ 0.77
CCNC-213ENST00000523541 EPHB4P54760 987 aa19.85■□□□□ 0.77
CCNC-213ENST00000523541 PCNX4Q63HM2 1172 aa19.85■□□□□ 0.77
CCNC-213ENST00000523541 CMTR1Q8N1G2 835 aaKnown RBP19.85■□□□□ 0.77
CCNC-213ENST00000523541 AFG1LQ8WV93 481 aa19.85■□□□□ 0.77
CCNC-213ENST00000523541 INPP4AQ96PE3 977 aaPredicted RBP19.85■□□□□ 0.77
CCNC-213ENST00000523541 AGXT2Q9BYV1 514 aa19.85■□□□□ 0.77
CCNC-213ENST00000523541 KLF18A0A0U1RQI7 1052 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 B4GALT4O60513 344 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 MMP3P08254 477 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 CSF2RAP15509 400 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 RPS6KB1P23443 525 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 NBPF20Q3BBV1 942 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 CELF3Q5SZQ8 465 aaKnown RBP19.84■□□□□ 0.77
CCNC-213ENST00000523541 MYSM1Q5VVJ2 828 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 FAM109BQ6ICB4 259 aaPredicted RBP19.84■□□□□ 0.77
CCNC-213ENST00000523541 PPP1R18Q6NYC8 613 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 SESTD1Q86VW0 696 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 CCDC82Q8N4S0 544 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 KATNAL1Q9BW62 490 aa19.84■□□□□ 0.77
CCNC-213ENST00000523541 GOLGA8AA7E2F4 631 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 GOLGA8BA8MQT2 603 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 MAFGO15525 162 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 HOXD8P13378 290 aaPredicted RBP19.83■□□□□ 0.77
CCNC-213ENST00000523541 FUT2Q10981 343 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 NEDD9Q14511 834 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 USP17L6PQ6QN14 398 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 Q6ZUG5 572 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 GIMAP8Q8ND71 665 aaPredicted RBP19.83■□□□□ 0.77
CCNC-213ENST00000523541 CDHR1Q96JP9 859 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 TCEANC2Q96MN5 208 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 SENP7Q9BQF6 1050 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 USP26Q9BXU7 913 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 TM6SF1Q9BZW5 370 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 NOD1Q9Y239 953 aa19.83■□□□□ 0.77
CCNC-213ENST00000523541 LAMA2P24043 3122 aaKnown RBP19.83■□□□□ 0.76
CCNC-213ENST00000523541 SPATA31C2B4DYI2 1134 aa19.82■□□□□ 0.76
CCNC-213ENST00000523541 FIBPO43427 364 aa19.82■□□□□ 0.76
CCNC-213ENST00000523541 ACRP10323 421 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms