RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 PIBF1Q8WXW3 757 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 VWCEQ96DN2 955 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 WNT8AQ9H1J5 351 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 HIPK3Q9H422 1215 aa14.34□□□□□ -0.11
VEGFA-223ENST00000523125 TRMT13Q9NUP7 481 aaKnown RBP14.34□□□□□ -0.11
VEGFA-223ENST00000523125 UNC80Q8N2C7 3258 aa14.33□□□□□ -0.11
VEGFA-223ENST00000523125 CHD7Q9P2D1 2997 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 GCOM1H8Y6P7 765 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-223ENST00000523125 PLEKHA8P1O95397 391 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 GH1P01241 217 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 MMP3P08254 477 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 POLR2MP0CAP2 368 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 ACRP10323 421 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 RXRAP19793 462 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 KIF5BP33176 963 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 SRBD1Q8N5C6 995 aaKnown RBP14.33□□□□□ -0.12
VEGFA-223ENST00000523125 CTCFLQ8NI51 663 aaPredicted RBP14.33□□□□□ -0.12
VEGFA-223ENST00000523125 GUCD1Q96NT3 240 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 LRRC2Q9BYS8 371 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 IL23AQ9NPF7 189 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 STXBP5LQ9Y2K9 1186 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 TET1Q8NFU7 2136 aa14.33□□□□□ -0.12
VEGFA-223ENST00000523125 CCDC69A6NI79 296 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 CDC45O75419 566 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 CYP2C9P11712 490 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 MYCLP12524 364 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-223ENST00000523125 EXOSC10Q01780 885 aaKnown RBP14.32□□□□□ -0.12
VEGFA-223ENST00000523125 TSGA10IPQ3SY00 556 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 NFRKBQ6P4R8 1299 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 NFXL1Q6ZNB6 911 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 ZNF365Q70YC5 407 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 SGMS1Q86VZ5 419 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 RASEFQ8IZ41 740 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 CMTR1Q8N1G2 835 aaKnown RBP14.32□□□□□ -0.12
VEGFA-223ENST00000523125 KAT2BQ92831 832 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 EMID1Q96A84 441 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-223ENST00000523125 ZFP91Q96JP5 570 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-223ENST00000523125 FAM161BQ96MY7 647 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 TTYH1Q9H313 450 aaPredicted RBP14.32□□□□□ -0.12
VEGFA-223ENST00000523125 FRMPD4Q14CM0 1322 aa14.32□□□□□ -0.12
VEGFA-223ENST00000523125 CCL23P55773 120 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 MRPS9P82933 396 aaKnown RBP14.31□□□□□ -0.12
VEGFA-223ENST00000523125 SP2Q02086 613 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 ADCK5Q3MIX3 580 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 ZNF697Q5TEC3 545 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 RAB11FIP4Q86YS3 637 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 GPKOWQ92917 476 aaPredicted RBP eCLIP14.31□□□□□ -0.129e-7■□□□□ 11
VEGFA-223ENST00000523125 RRP36Q96EU6 259 aaKnown RBP14.31□□□□□ -0.12
VEGFA-223ENST00000523125 CCDC136Q96JN2 1154 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 NEK1Q96PY6 1258 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 LZTS2Q9BRK4 669 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 SEMA6BQ9H3T3 888 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 MRVI1Q9Y6F6 885 aa14.31□□□□□ -0.12
VEGFA-223ENST00000523125 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-223ENST00000523125 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-223ENST00000523125 MEIS2O14770 477 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 SUPT20HL2P0C7V6 817 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 CALM1P0DP23 149 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 CALM2P0DP24 149 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 CALM3P0DP25 149 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 HOXD8P13378 290 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-223ENST00000523125 GNAQP50148 359 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 PTPN11Q06124 597 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-223ENST00000523125 LAMC2Q13753 1193 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 FAM47CQ5HY64 1035 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 RNF20Q5VTR2 975 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 PSRC1Q6PGN9 363 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-223ENST00000523125 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 FANCBQ8NB91 859 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 HERVK_113Q902F9 699 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 SCLYQ96I15 445 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 CTAGE1Q96RT6 745 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 CXXC1Q9P0U4 656 aaPredicted RBP14.3□□□□□ -0.12
VEGFA-223ENST00000523125 SLC12A7Q9Y666 1083 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 REV3LO60673 3130 aa14.3□□□□□ -0.12
VEGFA-223ENST00000523125 PTPRSQ13332 1948 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 MYO9BQ13459 2157 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 GRXCR1A8MXD5 290 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 PIK3CDO00329 1044 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 FGBP02675 491 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 TGFB3P10600 412 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 CASTP20810 708 aaKnown RBP14.29□□□□□ -0.12
VEGFA-223ENST00000523125 CCND2P30279 289 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 DGKDQ16760 1214 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 CELF3Q5SZQ8 465 aaKnown RBP14.29□□□□□ -0.12
VEGFA-223ENST00000523125 KCNV1Q6PIU1 500 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 SESTD1Q86VW0 696 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 DHX37Q8IY37 1157 aaKnown RBP14.29□□□□□ -0.12
VEGFA-223ENST00000523125 PPTC7Q8NI37 304 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 TCEANC2Q96MN5 208 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 BRPF3Q9ULD4 1205 aa14.29□□□□□ -0.12
VEGFA-223ENST00000523125 hCG_1642624A0A1W2PR95 340 aa14.28□□□□□ -0.12
VEGFA-223ENST00000523125 HAS3O00219 553 aa14.28□□□□□ -0.12
VEGFA-223ENST00000523125 TRANK1O15050 2925 aa14.28□□□□□ -0.12
VEGFA-223ENST00000523125 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
VEGFA-223ENST00000523125 DNAJB2P25686 324 aa14.28□□□□□ -0.12
VEGFA-223ENST00000523125 HSDL1Q3SXM5 330 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms