RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 HTATIP2Q9BUP3 242 aa12.1□□□□□ -0.47
DENND3-220ENST00000523066 UPF3AQ9H1J1 476 aaKnown RBP12.1□□□□□ -0.47
DENND3-220ENST00000523066 LOC102724159A0A0B4J2E5 919 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 CCDC196A0A1B0GTZ2 297 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 SORBS3O60504 671 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 CAPN2P17655 700 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 NEK4P51957 841 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 SCRN1Q12765 414 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 TRAF1Q13077 416 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 PWP2Q15269 919 aaKnown RBP12.09□□□□□ -0.47
DENND3-220ENST00000523066 STXBP2Q15833 593 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 PFKFB3Q16875 520 aaPredicted RBP12.09□□□□□ -0.47
DENND3-220ENST00000523066 LY6KQ17RY6 165 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 DUSP28Q4G0W2 176 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 ZNF274Q96GC6 653 aaPredicted RBP12.09□□□□□ -0.47
DENND3-220ENST00000523066 IWS1Q96ST2 819 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 MAF1Q9H063 256 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 PSTPIP2Q9H939 334 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 TMEM260Q9NX78 707 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 MAP3K20Q9NYL2 800 aaKnown RBP12.09□□□□□ -0.47
DENND3-220ENST00000523066 PHF24Q9UPV7 400 aa12.09□□□□□ -0.47
DENND3-220ENST00000523066 A0A1W2PQ45 241 aaPredicted RBP12.08□□□□□ -0.48
DENND3-220ENST00000523066 A0A1W2PQY0 241 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 H0YGN5 161 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 PRPF3O43395 683 aaKnown RBP12.08□□□□□ -0.48
DENND3-220ENST00000523066 GTPBP6O43824 516 aaPredicted RBP12.08□□□□□ -0.48
DENND3-220ENST00000523066 EVI5O60447 810 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 ASGR1P07306 291 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 TXNP10599 105 aaKnown RBP12.08□□□□□ -0.48
DENND3-220ENST00000523066 SCG2P13521 617 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 IFNAR1P17181 557 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 ACLYP53396 1101 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 MRPS9P82933 396 aaKnown RBP12.08□□□□□ -0.48
DENND3-220ENST00000523066 PPP2R5BQ15173 497 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 GNASQ5JWF2 1037 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 CCDC62Q6P9F0 684 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 SLC39A5Q6ZMH5 540 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 VSIG10LQ86VR7 867 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 SAMD3Q8N6K7 520 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 NECAB1Q8N987 351 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 OR6J1Q8NGC5 347 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 PPP1R13LQ8WUF5 828 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 CUL5Q93034 780 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 AIFM3Q96NN9 605 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 MPHOSPH6Q99547 160 aaKnown RBP12.08□□□□□ -0.48
DENND3-220ENST00000523066 C22orf23Q9BZE7 217 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 BCAS3Q9H6U6 928 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 BARHL2Q9NY43 387 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 RTEL1Q9NZ71 1219 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 FRMPD4Q14CM0 1322 aa12.08□□□□□ -0.48
DENND3-220ENST00000523066 SMCO2A6NFE2 343 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 B4DLN1 442 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 PIK3CDO00329 1044 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 EIF3JO75822 258 aaKnown RBP12.07□□□□□ -0.48
DENND3-220ENST00000523066 SYN1P17600 705 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 CST5P28325 142 aaPredicted RBP12.07□□□□□ -0.48
DENND3-220ENST00000523066 CCND2P30279 289 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 MRPL12P52815 198 aaKnown RBP12.07□□□□□ -0.48
DENND3-220ENST00000523066 RTP1P59025 263 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 ME3Q16798 604 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 TRIM60Q495X7 471 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 SCFD2Q8WU76 684 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 RNF26Q9BY78 433 aaPredicted RBP12.07□□□□□ -0.48
DENND3-220ENST00000523066 AP5M1Q9H0R1 490 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
DENND3-220ENST00000523066 SLKQ9H2G2 1235 aaPredicted RBP12.07□□□□□ -0.48
DENND3-220ENST00000523066 RIC8AQ9NPQ8 531 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 VPS54Q9P1Q0 977 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 ZMYND8Q9ULU4 1186 aaPredicted RBP12.07□□□□□ -0.48
DENND3-220ENST00000523066 PCDHB8Q9UN66 801 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 PCDHA6Q9UN73 950 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 PCDHB13Q9Y5F0 798 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 PCDHA8Q9Y5H6 950 aa12.07□□□□□ -0.48
DENND3-220ENST00000523066 CPLX1O14810 134 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 PFKFB2O60825 505 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 EIF5BO60841 1220 aaKnown RBP12.06□□□□□ -0.48
DENND3-220ENST00000523066 CTDNEP1O95476 244 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 ADCY7P51828 1080 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 PSMC6P62333 389 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 NKX3-2P78367 333 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 SP2Q02086 613 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 SSRP1Q08945 709 aaKnown RBP12.06□□□□□ -0.48
DENND3-220ENST00000523066 ST3GAL1Q11201 340 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 SEMA3FQ13275 785 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 TTLL4Q14679 1199 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 FSCN1Q16658 493 aaKnown RBP12.06□□□□□ -0.48
DENND3-220ENST00000523066 CXCL17Q6UXB2 119 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 TSEN34Q9BSV6 310 aaKnown RBP12.06□□□□□ -0.48
DENND3-220ENST00000523066 SPC25Q9HBM1 224 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 DDX41Q9UJV9 622 aaKnown RBP12.06□□□□□ -0.48
DENND3-220ENST00000523066 ATP11BQ9Y2G3 1177 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 TELO2Q9Y4R8 837 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 MRVI1Q9Y6F6 885 aa12.06□□□□□ -0.48
DENND3-220ENST00000523066 MOXD2PA6NHM9 499 aa12.05□□□□□ -0.48
DENND3-220ENST00000523066 RBM25P49756 843 aaKnown RBP12.05□□□□□ -0.48
DENND3-220ENST00000523066 CLK2P49760 499 aaKnown RBP12.05□□□□□ -0.48
DENND3-220ENST00000523066 AKAP17AQ02040 695 aaKnown RBP12.05□□□□□ -0.48
DENND3-220ENST00000523066 ARHGAP1Q07960 439 aa12.05□□□□□ -0.48
DENND3-220ENST00000523066 PDAP1Q13442 181 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms