RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 TAOK3Q9H2K8 898 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 TDRD3Q9H7E2 651 aaKnown RBP7.83□□□□□ -1.16
CSMD1-211ENST00000523062 DNAJC18Q9H819 358 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 CABP5Q9NP86 173 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 BARHL2Q9NY43 387 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 CLIP2Q9UDT6 1046 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 SEC63Q9UGP8 760 aaKnown RBP7.83□□□□□ -1.16
CSMD1-211ENST00000523062 PCDHA4Q9UN74 947 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 HPSEQ9Y251 543 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 PCDHB6Q9Y5E3 794 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 MRVI1Q9Y6F6 885 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 MYH8P13535 1937 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 GREB1LQ9C091 1923 aaPredicted RBP7.83□□□□□ -1.16
CSMD1-211ENST00000523062 COL4A5P29400 1685 aa7.83□□□□□ -1.16
CSMD1-211ENST00000523062 USP17L5A8MUK1 530 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 STXBP3O00186 592 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 CYTH3O43739 400 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 ZNF202O95125 648 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 GOLGA8HP0CJ92 632 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 ATP2B1P20020 1258 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 SYKP43405 635 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 MMP14P50281 582 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 CERKLQ49MI3 558 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-211ENST00000523062 TTC38Q5R3I4 469 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 GPATCH4Q5T3I0 446 aaKnown RBP7.82□□□□□ -1.16
CSMD1-211ENST00000523062 CIAPIN1Q6FI81 312 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 USP17L2Q6R6M4 530 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 SHC4Q6S5L8 630 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 TMEM179Q6ZVK1 233 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.82□□□□□ -1.16
CSMD1-211ENST00000523062 ZBTB33Q86T24 672 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 METTL16Q86W50 562 aaKnown RBP7.82□□□□□ -1.16
CSMD1-211ENST00000523062 ZFPM1Q8IX07 1006 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 MTMR14Q8NCE2 650 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 TRIM44Q96DX7 344 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-211ENST00000523062 PDLIM2Q96JY6 352 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 SDF4Q9BRK5 362 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 RIOX1Q9H6W3 641 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 KANSL2Q9H9L4 492 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 FAM13BQ9NYF5 915 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 NYAP2Q9P242 653 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 HERC5Q9UII4 1024 aaKnown RBP7.82□□□□□ -1.16
CSMD1-211ENST00000523062 FBXO2Q9UK22 296 aaPredicted RBP7.82□□□□□ -1.16
CSMD1-211ENST00000523062 CD2APQ9Y5K6 639 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 SIPA1L1O43166 1804 aa7.82□□□□□ -1.16
CSMD1-211ENST00000523062 LTBP3Q9NS15 1303 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 CCDC194A0A1B0GVG4 234 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ESYT2A0FGR8 921 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 SHISA8B8ZZ34 492 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 GNA11P29992 359 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 NAPAP54920 295 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 EIF6P56537 245 aaKnown RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ATP2C1P98194 919 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ATP2B2Q01814 1243 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ICA1Q05084 483 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ZNF543Q08ER8 600 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 TNIP1Q15025 636 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 R3HDM1Q15032 1099 aaKnown RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ZRSR1Q15695 479 aaKnown RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 CCDC96Q2M329 555 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ABCB5Q2M3G0 1257 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ANO6Q4KMQ2 910 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 EARS2Q5JPH6 523 aaKnown RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 FKBP1CQ5VVH2 108 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 TATDN1Q6P1N9 297 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 PIK3AP1Q6ZUJ8 805 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 RASGRP2Q7LDG7 609 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 KRT25Q7Z3Z0 450 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 CD163Q86VB7 1156 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 CLEC10AQ8IUN9 316 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 CEP57L1Q8IYX8 460 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 DCAF4Q8WV16 495 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 JDP2Q8WYK2 163 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 FERMT2Q96AC1 680 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 PRMT6Q96LA8 375 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 CLIC6Q96NY7 704 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 CSRNP1Q96S65 589 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 C6orf50Q9HD87 102 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ANO10Q9NW15 660 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 ZNF70Q9UC06 446 aaPredicted RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 FKBPLQ9UIM3 349 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 HOOK1Q9UJC3 728 aaKnown RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 KCNH3Q9ULD8 1083 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 SYNPO2Q9UMS6 1093 aa7.81□□□□□ -1.16
CSMD1-211ENST00000523062 SRPRBQ9Y5M8 271 aaKnown RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 BRCA1P38398 1863 aaKnown RBP7.81□□□□□ -1.16
CSMD1-211ENST00000523062 FRMPD2Q68DX3 1309 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-211ENST00000523062 BAZ2BQ9UIF8 2168 aaKnown RBP7.8□□□□□ -1.16
CSMD1-211ENST00000523062 CLRN2A0PK11 232 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 FAM196BA6NMK8 535 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 TCP10L2B9ZVM9 353 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 NFKBIEO00221 500 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 MYO1BO43795 1136 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 ZMYND10O75800 440 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 VEGFAP15692 232 aaPredicted RBP7.8□□□□□ -1.16
CSMD1-211ENST00000523062 RPS12P25398 132 aaKnown RBP7.8□□□□□ -1.16
CSMD1-211ENST00000523062 ZNF165P49910 485 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 CXCL9Q07325 125 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 HS1BP3Q53T59 392 aa7.8□□□□□ -1.16
CSMD1-211ENST00000523062 C1orf229Q6ZS94 237 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms