RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, human

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-215	ENST00000522963	TEX2	Q8IWB9	1127 aa		13.63	□□□□□ -0.23
PVT1-215	ENST00000522963	PGBD1	Q96JS3	809 aa		13.63	□□□□□ -0.23
PVT1-215	ENST00000522963	FOXP1	Q9H334	677 aa	Predicted RBP	13.63	□□□□□ -0.23
PVT1-215	ENST00000522963	MAP3K20	Q9NYL2	800 aa	Known RBP	13.63	□□□□□ -0.23
PVT1-215	ENST00000522963	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.63	□□□□□ -0.23
PVT1-215	ENST00000522963	SYNGAP1	Q96PV0	1343 aa		13.63	□□□□□ -0.23
PVT1-215	ENST00000522963	PDE4DIP	Q5VU43	2346 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	FAM205C	A6NFA0	338 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	SEPT4	O43236	478 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	IGHA2	P01877	340 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	GNL2	Q13823	731 aa	Known RBP	13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	LHX8	Q68G74	356 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	MAMDC4	Q6UXC1	1216 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	MSL3	Q8N5Y2	521 aa	Known RBP	13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	DIS3L	Q8TF46	1054 aa	Known RBP	13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	LENG1	Q96BZ8	264 aa	Predicted RBP	13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	TAAR1	Q96RJ0	339 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	ANO3	Q9BYT9	981 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	CRISPLD2	Q9H0B8	497 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	ADD3	Q9UEY8	706 aa	Known RBP	13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	FRMPD3	Q5JV73	1810 aa		13.62	□□□□□ -0.23
PVT1-215	ENST00000522963	MSC	O60682	206 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	FOS	P01100	380 aa	Predicted RBP	13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	ZNF865	P0CJ78	1059 aa	Predicted RBP	13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	ALDH5A1	P51649	535 aa	Predicted RBP	13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	NUCB2	P80303	420 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	AP3B2	Q13367	1082 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	ACVR2B	Q13705	512 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	PIK3AP1	Q6ZUJ8	805 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	KRT25	Q7Z3Z0	450 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	NOSTRIN	Q8IVI9	506 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	FBXO16	Q8IX29	292 aa	Predicted RBP	13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	PAWR	Q96IZ0	340 aa	Known RBP	13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	CHMP5	Q9NZZ3	219 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	FAM184B	Q9ULE4	1060 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	ASTN1	O14525	1302 aa		13.61	□□□□□ -0.23
PVT1-215	ENST00000522963	CCDC194	A0A1B0GVG4	234 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	SPDYE3	A6NKU9	549 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	EDIL3	O43854	480 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	F13A1	P00488	732 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	RARB	P10826	455 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	AKR1A1	P14550	325 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	PDE4D	Q08499	809 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	GJC2	Q5T442	439 aa	Predicted RBP	13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	MCTP2	Q6DN12	878 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	MPHOSPH6	Q99547	160 aa	Known RBP	13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	ABHD16B	Q9H3Z7	469 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	NRBP1	Q9UHY1	535 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	OGDHL	Q9ULD0	1010 aa		13.6	□□□□□ -0.23
PVT1-215	ENST00000522963	PGK1	P00558	417 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	EIF2AK2	P19525	551 aa	Known RBP	13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	SREBF1	P36956	1147 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	NONO	Q15233	471 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	INF2	Q27J81	1249 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	CCDC144B	Q3MJ40	725 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	ARHGEF16	Q5VV41	709 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	FAM173B	Q6P4H8	233 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	BRAP	Q7Z569	592 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	NECAB2	Q7Z6G3	386 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	TBCK	Q8TEA7	893 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	DPF3	Q92784	378 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	RMDN3	Q96TC7	470 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	XPNPEP3	Q9NQH7	507 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	PXMP2	Q9NR77	195 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	FRMPD4	Q14CM0	1322 aa		13.59	□□□□□ -0.23
PVT1-215	ENST00000522963	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.58	□□□□□ -0.24
PVT1-215	ENST00000522963		B4DLN1	442 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	ADCYAP1R1	P41586	468 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	TOB1	P50616	345 aa	Predicted RBP	13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	ARHGAP4	P98171	946 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	MYSM1	Q5VVJ2	828 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	ANKLE1	Q8NAG6	615 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	ARRDC4	Q8NCT1	418 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	DNER	Q8NFT8	737 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	IL31RA	Q8NI17	732 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	NSUN6	Q8TEA1	469 aa	Known RBP	13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	CRYGN	Q8WXF5	182 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	PDCD2L	Q9BRP1	358 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	C11orf49	Q9H6J7	331 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	EHMT1	Q9H9B1	1298 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	PDGFC	Q9NRA1	345 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	CENPF	P49454	3210 aa		13.58	□□□□□ -0.24
PVT1-215	ENST00000522963	KBTBD13	C9JR72	458 aa		13.57	□□□□□ -0.24
PVT1-215	ENST00000522963	WNT7A	O00755	349 aa		13.57	□□□□□ -0.24
PVT1-215	ENST00000522963	MYCL	P12524	364 aa	Predicted RBP	13.57	□□□□□ -0.24
PVT1-215	ENST00000522963	TNFAIP2	Q03169	654 aa		13.57	□□□□□ -0.24
PVT1-215	ENST00000522963	PGM5	Q15124	567 aa		13.57	□□□□□ -0.24
PVT1-215	ENST00000522963	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	13.57	□□□□□ -0.24
PVT1-215	ENST00000522963	FOXD4L3	Q6VB84	417 aa	Predicted RBP	13.57	□□□□□ -0.24
PVT1-215	ENST00000522963	HTATIP2	Q9BUP3	242 aa		13.57	□□□□□ -0.24
PVT1-215	ENST00000522963	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.57	□□□□□ -0.24
PVT1-215	ENST00000522963	ADCY6	O43306	1168 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	NR3C2	P08235	984 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	CYP3A4	P08684	503 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	C6orf222	P0C671	652 aa	Predicted RBP	13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	CAPN2	P17655	700 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	ATP2B1	P20020	1258 aa		13.56	□□□□□ -0.24
PVT1-215	ENST00000522963	PTGS1	P23219	599 aa		13.56	□□□□□ -0.24

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