RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 SEZ6LQ9BYH1 1024 aa21.63■■□□□ 1.05
SPIDR-220ENST00000522900 HIPK3Q9H422 1215 aa21.63■■□□□ 1.05
SPIDR-220ENST00000522900 GH1P01241 217 aa21.62■■□□□ 1.05
SPIDR-220ENST00000522900 SMARCA1P28370 1054 aa21.62■■□□□ 1.05
SPIDR-220ENST00000522900 RNF20Q5VTR2 975 aa21.62■■□□□ 1.05
SPIDR-220ENST00000522900 TMEM199Q8N511 208 aa21.62■■□□□ 1.05
SPIDR-220ENST00000522900 NOC4LQ9BVI4 516 aaKnown RBP21.62■■□□□ 1.05
SPIDR-220ENST00000522900 SLC12A7Q9Y666 1083 aa21.62■■□□□ 1.05
SPIDR-220ENST00000522900 MRVI1Q9Y6F6 885 aa21.62■■□□□ 1.05
SPIDR-220ENST00000522900 BAZ2BQ9UIF8 2168 aaKnown RBP21.61■■□□□ 1.05
SPIDR-220ENST00000522900 MYH6P13533 1939 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 hCG_1642624A0A1W2PR95 340 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 SORBS3O60504 671 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 KPNA6O60684 536 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 MMP3P08254 477 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 CYP2C9P11712 490 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 GNAQP50148 359 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 CCL23P55773 120 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 PPIGQ13427 754 aaKnown RBP eCLIP21.61■■□□□ 1.056e-7■■□□□ 12.3
SPIDR-220ENST00000522900 TSGA10IPQ3SY00 556 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 TMEM240Q5SV17 173 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 SGMS1Q86VZ5 419 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 CCDC82Q8N4S0 544 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 FANCBQ8NB91 859 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 GPKOWQ92917 476 aaPredicted RBP eCLIP21.61■■□□□ 1.05
SPIDR-220ENST00000522900 FAM161BQ96MY7 647 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 LZTS2Q9BRK4 669 aa21.61■■□□□ 1.05
SPIDR-220ENST00000522900 CALM1P0DP23 149 aa21.6■■□□□ 1.05
SPIDR-220ENST00000522900 CALM2P0DP24 149 aa21.6■■□□□ 1.05
SPIDR-220ENST00000522900 CALM3P0DP25 149 aa21.6■■□□□ 1.05
SPIDR-220ENST00000522900 CHMP4BP1P59074 171 aa21.6■■□□□ 1.05
SPIDR-220ENST00000522900 SP2Q02086 613 aa21.6■■□□□ 1.05
SPIDR-220ENST00000522900 FAM47CQ5HY64 1035 aa21.6■■□□□ 1.05
SPIDR-220ENST00000522900 FAM109BQ6ICB4 259 aaPredicted RBP21.6■■□□□ 1.05
SPIDR-220ENST00000522900 USP17L6PQ6QN14 398 aa21.6■■□□□ 1.05
SPIDR-220ENST00000522900 WNT8AQ9H1J5 351 aa21.6■■□□□ 1.05
SPIDR-220ENST00000522900 BRPF3Q9ULD4 1205 aa21.6■■□□□ 1.05
SPIDR-220ENST00000522900 SMAD3P84022 425 aaKnown RBP21.59■■□□□ 1.05
SPIDR-220ENST00000522900 ZNF365Q70YC5 407 aa21.59■■□□□ 1.05
SPIDR-220ENST00000522900 DHX32Q7L7V1 743 aaKnown RBP21.59■■□□□ 1.05
SPIDR-220ENST00000522900 KAT2BQ92831 832 aa21.59■■□□□ 1.05
SPIDR-220ENST00000522900 MEIS2O14770 477 aa21.58■■□□□ 1.05
SPIDR-220ENST00000522900 CCND2P30279 289 aa21.58■■□□□ 1.05
SPIDR-220ENST00000522900 MRPS9P82933 396 aaKnown RBP21.58■■□□□ 1.05
SPIDR-220ENST00000522900 NFRKBQ6P4R8 1299 aa21.58■■□□□ 1.05
SPIDR-220ENST00000522900 TMTC3Q6ZXV5 915 aa21.58■■□□□ 1.05
SPIDR-220ENST00000522900 MICU3Q86XE3 530 aa21.58■■□□□ 1.05
SPIDR-220ENST00000522900 DHX37Q8IY37 1157 aaKnown RBP21.58■■□□□ 1.05
SPIDR-220ENST00000522900 BCAS3Q9H6U6 928 aa21.58■■□□□ 1.05
SPIDR-220ENST00000522900 IL23AQ9NPF7 189 aa21.58■■□□□ 1.05
SPIDR-220ENST00000522900 SEC63Q9UGP8 760 aaKnown RBP21.58■■□□□ 1.05
SPIDR-220ENST00000522900 SUPT20HL2P0C7V6 817 aa21.57■■□□□ 1.04
SPIDR-220ENST00000522900 CPA1P15085 419 aa21.57■■□□□ 1.04
SPIDR-220ENST00000522900 LAMC2Q13753 1193 aa21.57■■□□□ 1.04
SPIDR-220ENST00000522900 APOA5Q6Q788 366 aa21.57■■□□□ 1.04
SPIDR-220ENST00000522900 EMID1Q96A84 441 aaPredicted RBP21.57■■□□□ 1.04
SPIDR-220ENST00000522900 VWCEQ96DN2 955 aa21.57■■□□□ 1.04
SPIDR-220ENST00000522900 SCLYQ96I15 445 aa21.57■■□□□ 1.04
SPIDR-220ENST00000522900 RTEL1Q9NZ71 1219 aa21.57■■□□□ 1.04
SPIDR-220ENST00000522900 CASTP20810 708 aaKnown RBP21.56■■□□□ 1.04
SPIDR-220ENST00000522900 DGKDQ16760 1214 aa21.56■■□□□ 1.04
SPIDR-220ENST00000522900 CELF3Q5SZQ8 465 aaKnown RBP21.56■■□□□ 1.04
SPIDR-220ENST00000522900 RASIP1Q5U651 963 aa21.56■■□□□ 1.04
SPIDR-220ENST00000522900 MYSM1Q5VVJ2 828 aa21.56■■□□□ 1.04
SPIDR-220ENST00000522900 SMARCC2Q8TAQ2 1214 aa21.56■■□□□ 1.04
SPIDR-220ENST00000522900 KCNB2Q92953 911 aa21.56■■□□□ 1.04
SPIDR-220ENST00000522900 GUCD1Q96NT3 240 aa21.56■■□□□ 1.04
SPIDR-220ENST00000522900 SEMA6BQ9H3T3 888 aa21.56■■□□□ 1.04
SPIDR-220ENST00000522900 FRMPD4Q14CM0 1322 aa21.55■■□□□ 1.04
SPIDR-220ENST00000522900 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.55■■□□□ 1.04
SPIDR-220ENST00000522900 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.55■■□□□ 1.04
SPIDR-220ENST00000522900 GRXCR1A8MXD5 290 aa21.55■■□□□ 1.04
SPIDR-220ENST00000522900 GGPS1O95749 300 aa21.55■■□□□ 1.04
SPIDR-220ENST00000522900 UBA1P22314 1058 aaKnown RBP21.55■■□□□ 1.04
SPIDR-220ENST00000522900 PTPN11Q06124 597 aaPredicted RBP21.55■■□□□ 1.04
SPIDR-220ENST00000522900 KRT32Q14532 448 aa21.55■■□□□ 1.04
SPIDR-220ENST00000522900 HSDL1Q3SXM5 330 aa21.55■■□□□ 1.04
SPIDR-220ENST00000522900 ZNF697Q5TEC3 545 aa21.55■■□□□ 1.04
SPIDR-220ENST00000522900 KCNV1Q6PIU1 500 aa21.55■■□□□ 1.04
SPIDR-220ENST00000522900 SYNE3Q6ZMZ3 975 aa21.55■■□□□ 1.04
SPIDR-220ENST00000522900 PPTC7Q8NI37 304 aa21.55■■□□□ 1.04
SPIDR-220ENST00000522900 TTYH1Q9H313 450 aaPredicted RBP21.55■■□□□ 1.04
SPIDR-220ENST00000522900 PIK3CDO00329 1044 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 FGBP02675 491 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 HSPA4P34932 840 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 SEMA3FQ13275 785 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 GDF6Q6KF10 455 aaPredicted RBP21.54■■□□□ 1.04
SPIDR-220ENST00000522900 CUL5Q93034 780 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 SPATA33Q96N06 139 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 CTAGE1Q96RT6 745 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 PSTPIP2Q9H939 334 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 CXXC1Q9P0U4 656 aaPredicted RBP21.54■■□□□ 1.04
SPIDR-220ENST00000522900 STXBP5LQ9Y2K9 1186 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 SCN10AQ9Y5Y9 1956 aa21.54■■□□□ 1.04
SPIDR-220ENST00000522900 KIAA1217Q5T5P2 1943 aa21.53■■□□□ 1.04
SPIDR-220ENST00000522900 ZNF286BP0CG31 522 aa21.53■■□□□ 1.04
SPIDR-220ENST00000522900 TGFB3P10600 412 aa21.53■■□□□ 1.04
SPIDR-220ENST00000522900 PSEN2P49810 448 aa21.53■■□□□ 1.04
SPIDR-220ENST00000522900 FUT2Q10981 343 aa21.53■■□□□ 1.04
SPIDR-220ENST00000522900 PSRC1Q6PGN9 363 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms