RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 FNDC3BQ53EP0 1204 aaKnown RBP8.58□□□□□ -1.04
PCM1-216ENST00000522777 TRIM61Q5EBN2 209 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 TAF7LQ5H9L4 462 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 SPACA3Q8IXA5 215 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 NIM1KQ8IY84 436 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 ANKRD13AQ8IZ07 590 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 FAM181AQ8N9Y4 354 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 TMEM145Q8NBT3 493 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 DAGLBQ8NCG7 672 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 MFSD3Q96ES6 412 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 MKNK2Q9HBH9 465 aa8.58□□□□□ -1.04
PCM1-216ENST00000522777 VIL1P09327 827 aaKnown RBP8.57□□□□□ -1.04
PCM1-216ENST00000522777 HMGB1P09429 215 aaKnown RBP8.57□□□□□ -1.04
PCM1-216ENST00000522777 HOXC12P31275 282 aa8.57□□□□□ -1.04
PCM1-216ENST00000522777 NTRK3Q16288 839 aa8.57□□□□□ -1.04
PCM1-216ENST00000522777 SLC35F1Q5T1Q4 408 aa8.57□□□□□ -1.04
PCM1-216ENST00000522777 KRT28Q7Z3Y7 464 aa8.57□□□□□ -1.04
PCM1-216ENST00000522777 SHKBP1Q8TBC3 707 aa8.57□□□□□ -1.04
PCM1-216ENST00000522777 IPO9Q96P70 1041 aaKnown RBP8.57□□□□□ -1.04
PCM1-216ENST00000522777 METTL22Q9BUU2 404 aaPredicted RBP8.57□□□□□ -1.04
PCM1-216ENST00000522777 ASCC2Q9H1I8 757 aaPredicted RBP8.57□□□□□ -1.04
PCM1-216ENST00000522777 CYP26B1Q9NR63 512 aa8.57□□□□□ -1.04
PCM1-216ENST00000522777 COL4A3BPQ9Y5P4 624 aa8.57□□□□□ -1.04
PCM1-216ENST00000522777 CCDC144AA2RUR9 1427 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 PRAG1Q86YV5 1406 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 NEXMIFQ5QGS0 1516 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 USP32Q8NFA0 1604 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 FAM83GA6ND36 823 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 IRS4O14654 1257 aaPredicted RBP8.56□□□□□ -1.04
PCM1-216ENST00000522777 KCNQ2O43526 872 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 IGLV1-40P01703 118 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 CEACAM5P06731 702 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 SNRPB2P08579 225 aaKnown RBP8.56□□□□□ -1.04
PCM1-216ENST00000522777 ITIH2P19823 946 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 FSTP19883 344 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 PRSS53Q2L4Q9 553 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 DPY19L1Q2PZI1 675 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 DUSP27Q5VZP5 1158 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 DENND5AQ6IQ26 1287 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 DHX37Q8IY37 1157 aaKnown RBP8.56□□□□□ -1.04
PCM1-216ENST00000522777 ZNF655Q8N720 491 aaPredicted RBP8.56□□□□□ -1.04
PCM1-216ENST00000522777 KCTD13Q8WZ19 329 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 TCTN2Q96GX1 697 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 CCDC140Q96MF4 163 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 PCDH12Q9NPG4 1184 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 PLAGL2Q9UPG8 496 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 CDC42BPGQ6DT37 1551 aa8.56□□□□□ -1.04
PCM1-216ENST00000522777 DISP2A7MBM2 1401 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 NAIPQ13075 1403 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 BLACEA4D250 179 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 FAM155AB1AL88 458 aaPredicted RBP8.55□□□□□ -1.04
PCM1-216ENST00000522777 WDR64B1ANS9 1081 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 AURKAO14965 403 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 H2AFB1P0C5Y9 115 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 H2AFB2P0C5Z0 115 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 BMP8BP34820 402 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 CLEC16AQ2KHT3 1053 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 GAB4Q2WGN9 574 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 NBPF8Q3BBV2 869 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 THNSL2Q86YJ6 484 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 KREMEN2Q8NCW0 462 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 GSTCDQ8NEC7 633 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 COPS5Q92905 334 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 CAMKK2Q96RR4 588 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 SPON1Q9HCB6 807 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 TRIM39Q9HCM9 518 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 SFMBT1Q9UHJ3 866 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 ROCK1Q13464 1354 aa8.55□□□□□ -1.04
PCM1-216ENST00000522777 A0A087X0B3 334 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 WASH4PA8MWX3 477 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 STXBP3O00186 592 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 CD3EP07766 207 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 AMPD3Q01432 767 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 POU4F1Q01851 419 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 SCRN1Q12765 414 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 CPSF6Q16630 551 aaKnown RBP eCLIP8.54□□□□□ -1.04
PCM1-216ENST00000522777 NKAPLQ5M9Q1 402 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 TSPYL5Q86VY4 417 aaPredicted RBP8.54□□□□□ -1.04
PCM1-216ENST00000522777 SLC7A14Q8TBB6 771 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 ZCRB1Q8TBF4 217 aaKnown RBP8.54□□□□□ -1.04
PCM1-216ENST00000522777 SLC12A9Q9BXP2 914 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 OSBPL1AQ9BXW6 950 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 TRIT1Q9H3H1 467 aaKnown RBP8.54□□□□□ -1.04
PCM1-216ENST00000522777 SLC52A2Q9HAB3 445 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 GPATCH2Q9NW75 528 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 TNS3Q68CZ2 1445 aa8.54□□□□□ -1.04
PCM1-216ENST00000522777 PARD3Q8TEW0 1356 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 GSC2O15499 205 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 ZNF205O95201 554 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 GDF11O95390 407 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 CPP00450 1065 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 PROCP04070 461 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 IFNGR1P15260 489 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 SDSP20132 328 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 ECI1P42126 302 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 KCNJ6P48051 423 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 CLCN7P51798 805 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 GABREP78334 506 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 CDKAL1Q5VV42 579 aa8.53□□□□□ -1.04
PCM1-216ENST00000522777 CWF19L1Q69YN2 538 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms