RNA–Protein interactions for RNA: ENST00000522502.1

CLU-213, Transcript of clusterin, human

TSL 2

Gene CLU, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLU-213	ENST00000522502	BRWD1	Q9NSI6	2320 aa		11.8	□□□□□ -0.52
CLU-213	ENST00000522502	PARP1	P09874	1014 aa	Known RBP	11.8	□□□□□ -0.52
CLU-213	ENST00000522502	MYCL	P12524	364 aa	Predicted RBP	11.8	□□□□□ -0.52
CLU-213	ENST00000522502	DEFB103A	P81534	67 aa		11.8	□□□□□ -0.52
CLU-213	ENST00000522502	MBTPS1	Q14703	1052 aa		11.8	□□□□□ -0.52
CLU-213	ENST00000522502	RAB30	Q15771	203 aa		11.8	□□□□□ -0.52
CLU-213	ENST00000522502	PTGIS	Q16647	500 aa		11.8	□□□□□ -0.52
CLU-213	ENST00000522502	TJAP1	Q5JTD0	557 aa		11.8	□□□□□ -0.52
CLU-213	ENST00000522502	DNER	Q8NFT8	737 aa		11.8	□□□□□ -0.52
CLU-213	ENST00000522502	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
CLU-213	ENST00000522502	HDAC6	Q9UBN7	1215 aa		11.8	□□□□□ -0.52
CLU-213	ENST00000522502	DDX41	Q9UJV9	622 aa	Known RBP	11.8	□□□□□ -0.52
CLU-213	ENST00000522502	COL4A4	P53420	1690 aa	Predicted RBP	11.8	□□□□□ -0.52
CLU-213	ENST00000522502	NCOR1	O75376	2440 aa		11.8	□□□□□ -0.52
CLU-213	ENST00000522502	CYTH3	O43739	400 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	NBN	O60934	754 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	TAP1	Q03518	808 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	GPATCH4	Q5T3I0	446 aa	Known RBP	11.79	□□□□□ -0.52
CLU-213	ENST00000522502	ARHGEF16	Q5VV41	709 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	FAM117B	Q6P1L5	589 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	TRAF7	Q6Q0C0	670 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	FBXO11	Q86XK2	927 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	HOMER1	Q86YM7	354 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	RPUSD2	Q8IZ73	545 aa	Known RBP	11.79	□□□□□ -0.52
CLU-213	ENST00000522502	ARNTL2	Q8WYA1	636 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	PIGS	Q96S52	555 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	DSCC1	Q9BVC3	393 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	RNF41	Q9H4P4	317 aa	Predicted RBP	11.79	□□□□□ -0.52
CLU-213	ENST00000522502	PXMP2	Q9NR77	195 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.79	□□□□□ -0.52
CLU-213	ENST00000522502	ABCB11	O95342	1321 aa		11.79	□□□□□ -0.52
CLU-213	ENST00000522502	C5orf42	Q9H799	3197 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	KLRF2	D3W0D1	207 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	LPXN	O60711	386 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	NR3C2	P08235	984 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	CYP21A2	P08686	494 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	NFRKB	Q6P4R8	1299 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	IQCA1	Q86XH1	822 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	RAB11FIP4	Q86YS3	637 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	RGS22	Q8NE09	1264 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	ADAMTS19	Q8TE59	1207 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	NSUN6	Q8TEA1	469 aa	Known RBP	11.78	□□□□□ -0.52
CLU-213	ENST00000522502	ASB2	Q96Q27	587 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	MYL10	Q9BUA6	226 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	MTUS1	Q9ULD2	1270 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	PCDHA11	Q9Y5I1	949 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	MTCH2	Q9Y6C9	303 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	BDP1	A6H8Y1	2624 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	MYO7A	Q13402	2215 aa		11.78	□□□□□ -0.52
CLU-213	ENST00000522502	PALM3	A6NDB9	673 aa	Predicted RBP	11.77	□□□□□ -0.53
CLU-213	ENST00000522502	NKRF	O15226	690 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
CLU-213	ENST00000522502	GH1	P01241	217 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	PSEN2	P49810	448 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	HSD17B4	P51659	736 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	ANTXR2	P58335	489 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	STXBP2	Q15833	593 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	IMMT	Q16891	758 aa	Known RBP	11.77	□□□□□ -0.53
CLU-213	ENST00000522502	TRIM71	Q2Q1W2	868 aa	Known RBP	11.77	□□□□□ -0.53
CLU-213	ENST00000522502	HSDL1	Q3SXM5	330 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	ASPRV1	Q53RT3	343 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	TMEM67	Q5HYA8	995 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	IFIT1B	Q5T764	474 aa	Known RBP	11.77	□□□□□ -0.53
CLU-213	ENST00000522502	TTC22	Q5TAA0	569 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.77	□□□□□ -0.53
CLU-213	ENST00000522502	FCHSD1	Q86WN1	690 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	HERC6	Q8IVU3	1022 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	CMTR1	Q8N1G2	835 aa	Known RBP	11.77	□□□□□ -0.53
CLU-213	ENST00000522502	MTMR8	Q96EF0	704 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	THEG	Q9P2T0	379 aa		11.77	□□□□□ -0.53
CLU-213	ENST00000522502	TNFRSF10A	O00220	468 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	SUPT20HL2	P0C7V6	817 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	PC	P11498	1178 aa	Known RBP	11.76	□□□□□ -0.53
CLU-213	ENST00000522502	CKB	P12277	381 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	WDR5	P61964	334 aa	Known RBP	11.76	□□□□□ -0.53
CLU-213	ENST00000522502	MFSD10	Q14728	455 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	PGM5	Q15124	567 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	KIAA0753	Q2KHM9	967 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	ZNF618	Q5T7W0	954 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	RETREG2	Q8NC44	543 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	GDPD5	Q8WTR4	605 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	PDCD2L	Q9BRP1	358 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	UBAC1	Q9BSL1	405 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	RTEL1	Q9NZ71	1219 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	GTF2IRD1	Q9UHL9	959 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	NOD1	Q9Y239	953 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	MRPL11	Q9Y3B7	192 aa	Known RBP	11.76	□□□□□ -0.53
CLU-213	ENST00000522502	PCDHA1	Q9Y5I3	950 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	MRVI1	Q9Y6F6	885 aa		11.76	□□□□□ -0.53
CLU-213	ENST00000522502	LOC102724159	A0A0B4J2E5	919 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	hCG_1642624	A0A1W2PR95	340 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	HAS3	O00219	553 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	GGPS1	O95749	300 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	BMP1	P13497	986 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	RXRA	P19793	462 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	UBA1	P22314	1058 aa	Known RBP	11.75	□□□□□ -0.53
CLU-213	ENST00000522502	CHML	P26374	656 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	MFAP1	P55081	439 aa	Known RBP	11.75	□□□□□ -0.53
CLU-213	ENST00000522502	MRPS9	P82933	396 aa	Known RBP	11.75	□□□□□ -0.53
CLU-213	ENST00000522502	SEMA3F	Q13275	785 aa		11.75	□□□□□ -0.53
CLU-213	ENST00000522502	GRB10	Q13322	594 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms