RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 HOXA13P31271 388 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-218ENST00000522222 RCAN1P53805 252 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 PDE4DQ08499 809 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 APOBRQ0VD83 1088 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 FUT2Q10981 343 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 PWP2Q15269 919 aaKnown RBP7.81□□□□□ -1.16
SPIDR-218ENST00000522222 ANKRD1Q15327 319 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 LRRC26Q2I0M4 334 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 TAPT1Q6NXT6 567 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 SYNE3Q6ZMZ3 975 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 Q6ZUG5 572 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 RNF180Q86T96 592 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 TLK2Q86UE8 772 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 FANCBQ8NB91 859 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 DNERQ8NFT8 737 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 DPF3Q92784 378 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 BRF1Q92994 677 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 TAAR1Q96RJ0 339 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 UPF3BQ9BZI7 483 aaKnown RBP7.81□□□□□ -1.16
SPIDR-218ENST00000522222 SENP6Q9GZR1 1112 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-218ENST00000522222 MAF1Q9H063 256 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 TSPY26PQ9H489 355 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 PDGFCQ9NRA1 345 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 RBM28Q9NW13 759 aaKnown RBP7.81□□□□□ -1.16
SPIDR-218ENST00000522222 SEC63Q9UGP8 760 aaKnown RBP7.81□□□□□ -1.16
SPIDR-218ENST00000522222 NAP1L2Q9ULW6 460 aaPredicted RBP7.81□□□□□ -1.16
SPIDR-218ENST00000522222 NOL7Q9UMY1 257 aaKnown RBP7.81□□□□□ -1.16
SPIDR-218ENST00000522222 PHF24Q9UPV7 400 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 ZDHHC9Q9Y397 364 aa7.81□□□□□ -1.16
SPIDR-218ENST00000522222 A0A1W2PQ45 241 aaPredicted RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 A0A1W2PQY0 241 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 GCOM1H8Y6P7 765 aaPredicted RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 CTAGE5O15320 804 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 RRP9O43818 475 aaKnown RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 C6orf222P0C671 652 aaPredicted RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 POLR2MP0CAP2 368 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 SMPD1P17405 629 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 CST5P28325 142 aaPredicted RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 SMARCA1P28370 1054 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 CDC27P30260 824 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 METAP2P50579 478 aaKnown RBP eCLIP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 ATN1P54259 1190 aaPredicted RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 GJA9P57773 515 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 RTP1P59025 263 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 TNFAIP2Q03169 654 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 TRAF1Q13077 416 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 TMEM63BQ5T3F8 832 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 CCDC183Q5T5S1 534 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 NOL8Q76FK4 1167 aaKnown RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 HEATR3Q7Z4Q2 680 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 CCDC82Q8N4S0 544 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 KLHDC9Q8NEP7 349 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 IL31RAQ8NI17 732 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 GPT2Q8TD30 523 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 NSUN6Q8TEA1 469 aaKnown RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 GPKOWQ92917 476 aaPredicted RBP eCLIP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 FERMT2Q96AC1 680 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 RMDN3Q96TC7 470 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 MPHOSPH6Q99547 160 aaKnown RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 AGXT2Q9BYV1 514 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 ZSWIM6Q9HCJ5 1215 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 PXMP2Q9NR77 195 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 FAM217BQ9NTX9 383 aaPredicted RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 ZMYND8Q9ULU4 1186 aaPredicted RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 SMC3Q9UQE7 1217 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 GNEQ9Y223 722 aaKnown RBP7.8□□□□□ -1.16
SPIDR-218ENST00000522222 NR2E3Q9Y5X4 410 aa7.8□□□□□ -1.16
SPIDR-218ENST00000522222 FRMPD4Q14CM0 1322 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 RBM47A0AV96 593 aaKnown RBP7.79□□□□□ -1.16
SPIDR-218ENST00000522222 OFD1O75665 1012 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 ARIH2O95376 493 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 TPM3P06753 285 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 ZSCAN22P10073 491 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-218ENST00000522222 ACLYP53396 1101 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 UBE2HP62256 183 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 NKX3-2P78367 333 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 BEX3Q00994 111 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 TOB2Q14106 344 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-218ENST00000522222 SNX17Q15036 470 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 PPP2R5BQ15173 497 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 FSCN1Q16658 493 aaKnown RBP7.79□□□□□ -1.16
SPIDR-218ENST00000522222 TRIM60Q495X7 471 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 DUSP28Q4G0W2 176 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 ARHGEF16Q5VV41 709 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 WWC2Q6AWC2 1192 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 CCSAPQ6IQ19 270 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-218ENST00000522222 RUFY3Q7L099 469 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 MTERF4Q7Z6M4 381 aaKnown RBP7.79□□□□□ -1.16
SPIDR-218ENST00000522222 FCHSD1Q86WN1 690 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 FBXL16Q8N461 479 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 SCFD2Q8WU76 684 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 MAP7D2Q96T17 732 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 PDCD2LQ9BRP1 358 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 TSEN34Q9BSV6 310 aaKnown RBP7.79□□□□□ -1.16
SPIDR-218ENST00000522222 WDR11Q9BZH6 1224 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 ALDH8A1Q9H2A2 487 aaPredicted RBP7.79□□□□□ -1.16
SPIDR-218ENST00000522222 SPC25Q9HBM1 224 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 CYP46A1Q9Y6A2 500 aa7.79□□□□□ -1.16
SPIDR-218ENST00000522222 LTBP2Q14767 1821 aa7.78□□□□□ -1.16
SPIDR-218ENST00000522222 KIAA1217Q5T5P2 1943 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms