RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CNTN2Q02246 1040 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 IL17AQ16552 155 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 Q4G0T1 1027 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 PCNX4Q63HM2 1172 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 TNS4Q8IZW8 715 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 FSIP1Q8NA03 581 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 CYP2W1Q8TAV3 490 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 CSRNP2Q9H175 543 aa24.21■■□□□ 1.47
R3HCC1-208ENST00000522012 TCHHQ07283 1943 aa24.2■■□□□ 1.47
R3HCC1-208ENST00000522012 BCRP11274 1271 aa24.2■■□□□ 1.47
R3HCC1-208ENST00000522012 TXKP42681 527 aa24.2■■□□□ 1.47
R3HCC1-208ENST00000522012 CRHR2Q13324 411 aa24.2■■□□□ 1.47
R3HCC1-208ENST00000522012 SPECC1Q5M775 1068 aa24.2■■□□□ 1.47
R3HCC1-208ENST00000522012 MTMR9Q96QG7 549 aa24.2■■□□□ 1.47
R3HCC1-208ENST00000522012 ALDH1A1P00352 501 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 PGK2P07205 417 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 CMA1P23946 247 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 CCND2P30279 289 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 KLHL40Q2TBA0 621 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 CEP55Q53EZ4 464 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 SHC4Q6S5L8 630 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 REM2Q8IYK8 340 aaPredicted RBP24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 ZNF579Q8NAF0 562 aaKnown RBP24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 DNERQ8NFT8 737 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 MRPS27Q92552 414 aaKnown RBP24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 UIMC1Q96RL1 719 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 IVNS1ABPQ9Y6Y0 642 aa24.2■■□□□ 1.46
R3HCC1-208ENST00000522012 CA12O43570 354 aa24.19■■□□□ 1.46
R3HCC1-208ENST00000522012 NR3C2P08235 984 aa24.19■■□□□ 1.46
R3HCC1-208ENST00000522012 LIG1P18858 919 aa24.19■■□□□ 1.46
R3HCC1-208ENST00000522012 C17orf99Q6UX52 265 aa24.19■■□□□ 1.46
R3HCC1-208ENST00000522012 PLA2G4DQ86XP0 818 aa24.19■■□□□ 1.46
R3HCC1-208ENST00000522012 MXRA8Q9BRK3 442 aa24.19■■□□□ 1.46
R3HCC1-208ENST00000522012 GOLPH3LQ9H4A5 285 aa24.19■■□□□ 1.46
R3HCC1-208ENST00000522012 ADD3Q9UEY8 706 aaKnown RBP24.19■■□□□ 1.46
R3HCC1-208ENST00000522012 IGLV3-22A0A075B6J6 115 aa24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 A0A1B0GVL5 298 aa24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 MAPK4P31152 587 aa24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 MRPS9P82933 396 aaKnown RBP24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 RESP18Q5W5W9 173 aa24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 XRRA1Q6P2D8 792 aa24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 CCDC73Q6ZRK6 1079 aa24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 FAM133AQ8N9E0 248 aa24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 HAS1Q92839 578 aa24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 LENG9Q96B70 501 aa24.18■■□□□ 1.46
R3HCC1-208ENST00000522012 SOWAHBA6NEL2 793 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 STRNO43815 780 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 TECP42680 631 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 VEGFBP49765 207 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 GPR142Q7Z601 462 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 VSIG10LQ86VR7 867 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 GJA10Q969M2 543 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 IWS1Q96ST2 819 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 KCNMB3Q9NPA1 279 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 UBIAD1Q9Y5Z9 338 aa24.17■■□□□ 1.46
R3HCC1-208ENST00000522012 DNAJC25-GNG10A0A024R161 153 aa24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 MEIS1O00470 390 aa24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 ECM2O94769 699 aaPredicted RBP24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 ITGB5P18084 799 aa24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 LONP1P36776 959 aaKnown RBP24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 ALDH5A1P51649 535 aaPredicted RBP24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 TMEM266Q2M3C6 531 aa24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 PLEKHH3Q7Z736 793 aa24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 SLFN12Q8IYM2 578 aa24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 FAM13BQ9NYF5 915 aa24.16■■□□□ 1.46
R3HCC1-208ENST00000522012 TBX3O15119 743 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 MSH4O15457 936 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 PFKFB1P16118 471 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 NDUFA8P51970 172 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 SETQ01105 290 aaPredicted RBP24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 ABRAQ8N0Z2 381 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 ETNPPLQ8TBG4 499 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 FAM20AQ96MK3 541 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 WDR11Q9BZH6 1224 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 TTC12Q9H892 705 aaPredicted RBP24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 JADE2Q9NQC1 790 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 ASTN1O14525 1302 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 RBBP6Q7Z6E9 1792 aaKnown RBP24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 ARP10275 920 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 ADORA2AP29274 412 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 USP49Q70CQ1 688 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 NIPA1Q7RTP0 329 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 SYMPKQ92797 1274 aaKnown RBP24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 EPSTI1Q96J88 318 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 PCDHA12Q9UN75 941 aa24.15■■□□□ 1.46
R3HCC1-208ENST00000522012 NR1I2O75469 434 aa24.14■■□□□ 1.45
R3HCC1-208ENST00000522012 MAP2K2P36507 400 aa24.14■■□□□ 1.45
R3HCC1-208ENST00000522012 FXR2P51116 673 aaKnown RBP eCLIP24.14■■□□□ 1.45
R3HCC1-208ENST00000522012 FAM160A1Q05DH4 1040 aa24.14■■□□□ 1.45
R3HCC1-208ENST00000522012 CAVIN1Q6NZI2 390 aaKnown RBP24.14■■□□□ 1.45
R3HCC1-208ENST00000522012 MPHOSPH6Q99547 160 aaKnown RBP24.14■■□□□ 1.45
R3HCC1-208ENST00000522012 DACT1Q9NYF0 836 aa24.14■■□□□ 1.45
R3HCC1-208ENST00000522012 B4DLN1 442 aa24.13■■□□□ 1.45
R3HCC1-208ENST00000522012 PDE4DQ08499 809 aa24.13■■□□□ 1.45
R3HCC1-208ENST00000522012 MTMR1Q13613 665 aa24.13■■□□□ 1.45
R3HCC1-208ENST00000522012 STXBP2Q15833 593 aa24.13■■□□□ 1.45
R3HCC1-208ENST00000522012 ZNF577Q9BSK1 485 aa24.13■■□□□ 1.45
R3HCC1-208ENST00000522012 RAB34Q9BZG1 259 aa24.13■■□□□ 1.45
R3HCC1-208ENST00000522012 KCNH7Q9NS40 1196 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms