RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 ARMCX2Q7L311 632 aa27.51■■□□□ 1.99
PVT1-212ENST00000521951 MSL3Q8N5Y2 521 aaKnown RBP27.51■■□□□ 1.99
PVT1-212ENST00000521951 NOL7Q9UMY1 257 aaKnown RBP27.51■■□□□ 1.99
PVT1-212ENST00000521951 ATP2B1P20020 1258 aa27.5■■□□□ 1.99
PVT1-212ENST00000521951 LETM2Q2VYF4 491 aa27.5■■□□□ 1.99
PVT1-212ENST00000521951 LRRC37A2A6NM11 1700 aa27.49■■□□□ 1.99
PVT1-212ENST00000521951 WNT7AO00755 349 aa27.49■■□□□ 1.99
PVT1-212ENST00000521951 IGHA2P01877 340 aa27.49■■□□□ 1.99
PVT1-212ENST00000521951 CIITAP33076 1130 aa27.49■■□□□ 1.99
PVT1-212ENST00000521951 TRAPPC10P48553 1259 aa27.49■■□□□ 1.99
PVT1-212ENST00000521951 RAET1EQ8TD07 263 aa27.49■■□□□ 1.99
PVT1-212ENST00000521951 RTEL1Q9NZ71 1219 aa27.49■■□□□ 1.99
PVT1-212ENST00000521951 MYH15Q9Y2K3 1946 aa27.48■■□□□ 1.99
PVT1-212ENST00000521951 SYNGAP1Q96PV0 1343 aa27.48■■□□□ 1.99
PVT1-212ENST00000521951 EIF3JO75822 258 aaKnown RBP27.48■■□□□ 1.99
PVT1-212ENST00000521951 SNAI1O95863 264 aaPredicted RBP27.48■■□□□ 1.99
PVT1-212ENST00000521951 ZNF76P36508 570 aa27.48■■□□□ 1.99
PVT1-212ENST00000521951 RILPL1Q5EBL4 403 aa27.48■■□□□ 1.99
PVT1-212ENST00000521951 CDKN2AIPQ9NXV6 580 aaPredicted RBP27.48■■□□□ 1.99
PVT1-212ENST00000521951 TDP2O95551 362 aa27.47■■□□□ 1.99
PVT1-212ENST00000521951 TRMT44Q8IYL2 757 aaKnown RBP27.47■■□□□ 1.99
PVT1-212ENST00000521951 CYP2W1Q8TAV3 490 aa27.47■■□□□ 1.99
PVT1-212ENST00000521951 TRIB2Q92519 343 aa27.47■■□□□ 1.99
PVT1-212ENST00000521951 UBIAD1Q9Y5Z9 338 aa27.47■■□□□ 1.99
PVT1-212ENST00000521951 CYP3A7-CYP3A51PA0A087WV96 503 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 FAM86B1E9PN63 330 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 ADCY3O60266 1144 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 CCNT1O60563 726 aaKnown RBP27.46■■□□□ 1.99
PVT1-212ENST00000521951 STAM2O75886 525 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 FAM86B2P0C5J1 330 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 CYP3A7P24462 503 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 NBR1Q14596 966 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 FOXD4L6Q3SYB3 417 aaPredicted RBP27.46■■□□□ 1.99
PVT1-212ENST00000521951 CEP55Q53EZ4 464 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 TTC38Q5R3I4 469 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 MOXD1Q6UVY6 613 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 FOXD4L3Q6VB84 417 aaPredicted RBP27.46■■□□□ 1.99
PVT1-212ENST00000521951 EEPD1Q7L9B9 569 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 MXRA8Q9BRK3 442 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 RGS20O76081 388 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 ELNP15502 786 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 ITGB5P18084 799 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 CYP2C19P33261 490 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 PPP4R3AQ6IN85 833 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 MBOAT7Q96N66 472 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 NAP1L4Q99733 375 aaKnown RBP27.46■■□□□ 1.99
PVT1-212ENST00000521951 PTPN22Q9Y2R2 807 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 PCDHB6Q9Y5E3 794 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 PTCH2Q9Y6C5 1203 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 KIAA1217Q5T5P2 1943 aa27.46■■□□□ 1.99
PVT1-212ENST00000521951 IGLV3-22A0A075B6J6 115 aa27.45■■□□□ 1.98
PVT1-212ENST00000521951 GCFC2P16383 781 aaKnown RBP27.45■■□□□ 1.98
PVT1-212ENST00000521951 ZNF174Q15697 407 aa27.45■■□□□ 1.98
PVT1-212ENST00000521951 PXYLP1Q8TE99 480 aa27.45■■□□□ 1.98
PVT1-212ENST00000521951 INPP4AQ96PE3 977 aaPredicted RBP27.45■■□□□ 1.98
PVT1-212ENST00000521951 KATNBL1Q9H079 304 aa27.45■■□□□ 1.98
PVT1-212ENST00000521951 MEIS1O00470 390 aa27.44■■□□□ 1.98
PVT1-212ENST00000521951 CTU1Q7Z7A3 348 aaKnown RBP27.44■■□□□ 1.98
PVT1-212ENST00000521951 FBXO16Q8IX29 292 aaPredicted RBP27.44■■□□□ 1.98
PVT1-212ENST00000521951 WDR11Q9BZH6 1224 aa27.44■■□□□ 1.98
PVT1-212ENST00000521951 JADE2Q9NQC1 790 aa27.44■■□□□ 1.98
PVT1-212ENST00000521951 Q4G0T1 1027 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 PRR16Q569H4 304 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 PRAMEF19Q5SWL8 479 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 MFSD14CQ5VZR4 134 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 NIPA1Q7RTP0 329 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 PLA2G4DQ86XP0 818 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 LENG9Q96B70 501 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 ABHD16BQ9H3Z7 469 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 VTA1Q9NP79 307 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.43■■□□□ 1.98
PVT1-212ENST00000521951 DDX25Q9UHL0 483 aaKnown RBP27.43■■□□□ 1.98
PVT1-212ENST00000521951 ATP6V1DQ9Y5K8 247 aa27.43■■□□□ 1.98
PVT1-212ENST00000521951 SLC37A4O43826 429 aa27.42■■□□□ 1.98
PVT1-212ENST00000521951 MCM7P33993 719 aa27.42■■□□□ 1.98
PVT1-212ENST00000521951 SEPT14Q6ZU15 432 aa27.42■■□□□ 1.98
PVT1-212ENST00000521951 NLRX1Q86UT6 975 aa27.42■■□□□ 1.98
PVT1-212ENST00000521951 CNPY2Q9Y2B0 182 aa27.42■■□□□ 1.98
PVT1-212ENST00000521951 TRIM32Q13049 653 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 ACVR2BQ13705 512 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 GNPTABQ3T906 1256 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 SLAIN1Q8ND83 568 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 GPRASP2Q96D09 838 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 ZNF396Q96N95 335 aaPredicted RBP27.41■■□□□ 1.98
PVT1-212ENST00000521951 USP28Q96RU2 1077 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 FTOQ9C0B1 505 aaKnown RBP eCLIP27.41■■□□□ 1.98
PVT1-212ENST00000521951 TFIP11Q9UBB9 837 aaKnown RBP27.41■■□□□ 1.98
PVT1-212ENST00000521951 ARP10275 920 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 DNM1Q05193 864 aaKnown RBP27.41■■□□□ 1.98
PVT1-212ENST00000521951 ORC2Q13416 577 aaPredicted RBP27.41■■□□□ 1.98
PVT1-212ENST00000521951 TAPT1Q6NXT6 567 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 CHAMP1Q96JM3 812 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 PDGFCQ9NRA1 345 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 CLIC4Q9Y696 253 aa27.41■■□□□ 1.98
PVT1-212ENST00000521951 TCHHQ07283 1943 aa27.4■■□□□ 1.98
PVT1-212ENST00000521951 HMGCRP04035 888 aa27.4■■□□□ 1.98
PVT1-212ENST00000521951 GRK4P32298 578 aa27.4■■□□□ 1.98
PVT1-212ENST00000521951 ICAM3P32942 547 aa27.4■■□□□ 1.98
PVT1-212ENST00000521951 SEMA3FQ13275 785 aa27.4■■□□□ 1.98
PVT1-212ENST00000521951 MTMR1Q13613 665 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms