RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 MAP4K2Q12851 820 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 FOXD4L6Q3SYB3 417 aaPredicted RBP9.06□□□□□ -0.96
SPIDR-215ENST00000521798 CFAP100Q494V2 611 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 EXOSC6Q5RKV6 272 aaKnown RBP9.06□□□□□ -0.96
SPIDR-215ENST00000521798 NBPF12Q5TAG4 269 aaPredicted RBP9.06□□□□□ -0.96
SPIDR-215ENST00000521798 NXNQ6DKJ4 435 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 FOXD4L3Q6VB84 417 aaPredicted RBP9.06□□□□□ -0.96
SPIDR-215ENST00000521798 CDC37L1Q7L3B6 337 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 MAMDC2Q7Z304 686 aaPredicted RBP9.06□□□□□ -0.96
SPIDR-215ENST00000521798 ARHGEF39Q8N4T4 335 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 KCTD13Q8WZ19 329 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 SLC39A13Q96H72 371 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 COG3Q96JB2 828 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 YIPF4Q9BSR8 244 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 ATXN3LQ9H3M9 355 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 IFT22Q9H7X7 185 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 PANK3Q9H999 370 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 GP6Q9HCN6 339 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 TRHDEQ9UKU6 1024 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 SPEF1Q9Y4P9 236 aa9.06□□□□□ -0.96
SPIDR-215ENST00000521798 WASHC2AQ641Q2 1341 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 CCDC7Q96M83 1385 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 TCRBV16S1A1N1A0A5B0 115 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 BLACEA4D250 179 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 ZEB2O60315 1214 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 NEFMP07197 916 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 FBLN1P23142 703 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 CD68P34810 354 aaPredicted RBP9.05□□□□□ -0.96
SPIDR-215ENST00000521798 GFRA1P56159 465 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 NTRK3Q16288 839 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 FAM102BQ5T8I3 360 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 UBE3DQ7Z6J8 389 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 TCEAL8Q8IYN2 117 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 CNTD1Q8N815 330 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 OR2W6PQ8NHA6 318 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 PI4K2BQ8TCG2 481 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 MAGEB10Q96LZ2 347 aaPredicted RBP9.05□□□□□ -0.96
SPIDR-215ENST00000521798 CGGBP1Q9UFW8 167 aaPredicted RBP9.05□□□□□ -0.96
SPIDR-215ENST00000521798 APOBEC2Q9Y235 224 aaKnown RBP9.05□□□□□ -0.96
SPIDR-215ENST00000521798 COMMD10Q9Y6G5 202 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 ABCC6O95255 1503 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 SPATA31A1Q5TZJ5 1347 aa9.05□□□□□ -0.96
SPIDR-215ENST00000521798 A0A087WZG4 1122 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 B4E1Z4 1266 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 NEMP1O14524 444 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 GABRDO14764 452 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 CREB3O43889 395 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 EPXP11678 715 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 RNF4P78317 190 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 AUHQ13825 339 aaKnown RBP9.04□□□□□ -0.96
SPIDR-215ENST00000521798 SYDE2Q5VT97 1194 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 CDCA2Q69YH5 1023 aaPredicted RBP9.04□□□□□ -0.96
SPIDR-215ENST00000521798 UBE2R2Q712K3 238 aaPredicted RBP9.04□□□□□ -0.96
SPIDR-215ENST00000521798 ADCY4Q8NFM4 1077 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 PPP1R13LQ8WUF5 828 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 CCDC140Q96MF4 163 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 ORAI3Q9BRQ5 295 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 KCNK4Q9NYG8 393 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 CGNL1Q0VF96 1302 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 MAP3K19Q56UN5 1328 aa9.04□□□□□ -0.96
SPIDR-215ENST00000521798 KIF20BQ96Q89 1820 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 M0R082 166 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 KCNH1O95259 989 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 OS9Q13438 667 aaPredicted RBP9.03□□□□□ -0.96
SPIDR-215ENST00000521798 TTLL4Q14679 1199 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 MLC1Q15049 377 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 GTF2IRD2BQ6EKJ0 949 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 TSHZ1Q6ZSZ6 1077 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 C8orf86Q6ZUL3 223 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 GTF2IRD2Q86UP8 949 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 SAMD3Q8N6K7 520 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 ZNF417Q8TAU3 575 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 UBASH3BQ8TF42 649 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 COG1Q8WTW3 980 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 ZNF587Q96SQ5 575 aaPredicted RBP9.03□□□□□ -0.96
SPIDR-215ENST00000521798 TMPRSS13Q9BYE2 586 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 CRB1P82279 1406 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 WDR17Q8IZU2 1322 aa9.03□□□□□ -0.96
SPIDR-215ENST00000521798 RFPL1O75677 317 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 HOXC12P31275 282 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 RRS1Q15050 365 aaKnown RBP9.02□□□□□ -0.97
SPIDR-215ENST00000521798 SF1Q15637 639 aaKnown RBP9.02□□□□□ -0.97
SPIDR-215ENST00000521798 IP6K1Q92551 441 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 ISL2Q96A47 359 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 VWCEQ96DN2 955 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 C1orf159Q96HA4 380 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 FOXQ1Q9C009 403 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 NKX2-4Q9H2Z4 354 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPIDR-215ENST00000521798 CRTAC1Q9NQ79 661 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 PRDM6Q9NQX0 595 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 ZNF180Q9UJW8 692 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 AP4E1Q9UPM8 1137 aa9.02□□□□□ -0.97
SPIDR-215ENST00000521798 LTN1O94822 1766 aa9.01□□□□□ -0.97
SPIDR-215ENST00000521798 THSD7AQ9UPZ6 1657 aa9.01□□□□□ -0.97
SPIDR-215ENST00000521798 GOLGA6CA6NDK9 693 aa9.01□□□□□ -0.97
SPIDR-215ENST00000521798 GOLGA6BA6NDN3 693 aa9.01□□□□□ -0.97
SPIDR-215ENST00000521798 ABLIM3O94929 683 aa9.01□□□□□ -0.97
SPIDR-215ENST00000521798 FBXO21O94952 628 aa9.01□□□□□ -0.97
SPIDR-215ENST00000521798 SCG5P05408 212 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms