RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 ALDH8A1Q9H2A2 487 aaPredicted RBP24.91■■□□□ 1.58
HOXA3-204ENST00000521401 FRMPD4Q14CM0 1322 aa24.9■■□□□ 1.58
HOXA3-204ENST00000521401 KPNA6O60684 536 aa24.9■■□□□ 1.58
HOXA3-204ENST00000521401 KRT32Q14532 448 aa24.9■■□□□ 1.58
HOXA3-204ENST00000521401 BRDTQ58F21 947 aaPredicted RBP24.9■■□□□ 1.58
HOXA3-204ENST00000521401 APOA5Q6Q788 366 aa24.9■■□□□ 1.58
HOXA3-204ENST00000521401 MICU3Q86XE3 530 aa24.9■■□□□ 1.58
HOXA3-204ENST00000521401 PPP1R12CQ9BZL4 782 aa24.9■■□□□ 1.58
HOXA3-204ENST00000521401 BRPF3Q9ULD4 1205 aa24.9■■□□□ 1.58
HOXA3-204ENST00000521401 MYH6P13533 1939 aa24.9■■□□□ 1.58
HOXA3-204ENST00000521401 MMP3P08254 477 aa24.89■■□□□ 1.58
HOXA3-204ENST00000521401 HSPA4P34932 840 aa24.89■■□□□ 1.58
HOXA3-204ENST00000521401 C16orf59Q7L2K0 433 aa24.89■■□□□ 1.58
HOXA3-204ENST00000521401 EMID1Q96A84 441 aaPredicted RBP24.89■■□□□ 1.58
HOXA3-204ENST00000521401 ZFP91Q96JP5 570 aaPredicted RBP24.89■■□□□ 1.58
HOXA3-204ENST00000521401 MRVI1Q9Y6F6 885 aa24.89■■□□□ 1.58
HOXA3-204ENST00000521401 UMODL1Q5DID0 1318 aa24.88■■□□□ 1.57
HOXA3-204ENST00000521401 MEIS2O14770 477 aa24.88■■□□□ 1.57
HOXA3-204ENST00000521401 CYP2C18P33260 490 aa24.88■■□□□ 1.57
HOXA3-204ENST00000521401 NBPF20Q3BBV1 942 aa24.88■■□□□ 1.57
HOXA3-204ENST00000521401 Q7L0L9 218 aa24.88■■□□□ 1.57
HOXA3-204ENST00000521401 PPP1R13LQ8WUF5 828 aa24.88■■□□□ 1.57
HOXA3-204ENST00000521401 TRMT13Q9NUP7 481 aaKnown RBP24.88■■□□□ 1.57
HOXA3-204ENST00000521401 SEC63Q9UGP8 760 aaKnown RBP24.88■■□□□ 1.57
HOXA3-204ENST00000521401 hCG_1642624A0A1W2PR95 340 aa24.87■■□□□ 1.57
HOXA3-204ENST00000521401 PIK3CDO00329 1044 aa24.87■■□□□ 1.57
HOXA3-204ENST00000521401 CSF2RAP15509 400 aa24.87■■□□□ 1.57
HOXA3-204ENST00000521401 CCND2P30279 289 aa24.87■■□□□ 1.57
HOXA3-204ENST00000521401 MRPS9P82933 396 aaKnown RBP24.87■■□□□ 1.57
HOXA3-204ENST00000521401 USP17L6PQ6QN14 398 aa24.87■■□□□ 1.57
HOXA3-204ENST00000521401 CCDC82Q8N4S0 544 aa24.87■■□□□ 1.57
HOXA3-204ENST00000521401 NOC4LQ9BVI4 516 aaKnown RBP24.87■■□□□ 1.57
HOXA3-204ENST00000521401 HIPK3Q9H422 1215 aa24.87■■□□□ 1.57
HOXA3-204ENST00000521401 SNX14Q9Y5W7 946 aa24.87■■□□□ 1.57
HOXA3-204ENST00000521401 CPA1P15085 419 aa24.86■■□□□ 1.57
HOXA3-204ENST00000521401 SP2Q02086 613 aa24.86■■□□□ 1.57
HOXA3-204ENST00000521401 FUT2Q10981 343 aa24.86■■□□□ 1.57
HOXA3-204ENST00000521401 PPIGQ13427 754 aaKnown RBP eCLIP24.86■■□□□ 1.57
HOXA3-204ENST00000521401 SYNE3Q6ZMZ3 975 aa24.86■■□□□ 1.57
HOXA3-204ENST00000521401 TMEM199Q8N511 208 aa24.86■■□□□ 1.57
HOXA3-204ENST00000521401 KAT2BQ92831 832 aa24.86■■□□□ 1.57
HOXA3-204ENST00000521401 GPKOWQ92917 476 aaPredicted RBP eCLIP24.86■■□□□ 1.57
HOXA3-204ENST00000521401 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.86■■□□□ 1.57
HOXA3-204ENST00000521401 HMGB1P09429 215 aaKnown RBP24.85■■□□□ 1.57
HOXA3-204ENST00000521401 LAMC2Q13753 1193 aa24.85■■□□□ 1.57
HOXA3-204ENST00000521401 NFRKBQ6P4R8 1299 aa24.85■■□□□ 1.57
HOXA3-204ENST00000521401 DEFB123Q8N688 67 aa24.85■■□□□ 1.57
HOXA3-204ENST00000521401 RNPC3Q96LT9 517 aaKnown RBP24.85■■□□□ 1.57
HOXA3-204ENST00000521401 FAM217BQ9NTX9 383 aaPredicted RBP24.85■■□□□ 1.57
HOXA3-204ENST00000521401 CNTNAP5Q8WYK1 1306 aa24.85■■□□□ 1.57
HOXA3-204ENST00000521401 ZBTB43O43298 467 aa24.84■■□□□ 1.57
HOXA3-204ENST00000521401 CYP2C9P11712 490 aa24.84■■□□□ 1.57
HOXA3-204ENST00000521401 TMEM240Q5SV17 173 aa24.84■■□□□ 1.57
HOXA3-204ENST00000521401 CELF3Q5SZQ8 465 aaKnown RBP24.84■■□□□ 1.57
HOXA3-204ENST00000521401 MYSM1Q5VVJ2 828 aa24.84■■□□□ 1.57
HOXA3-204ENST00000521401 KCNV1Q6PIU1 500 aa24.84■■□□□ 1.57
HOXA3-204ENST00000521401 PPTC7Q8NI37 304 aa24.84■■□□□ 1.57
HOXA3-204ENST00000521401 WNT8AQ9H1J5 351 aa24.84■■□□□ 1.57
HOXA3-204ENST00000521401 RBM28Q9NW13 759 aaKnown RBP24.84■■□□□ 1.57
HOXA3-204ENST00000521401 SCN10AQ9Y5Y9 1956 aa24.84■■□□□ 1.57
HOXA3-204ENST00000521401 ACRP10323 421 aa24.83■■□□□ 1.57
HOXA3-204ENST00000521401 TGFB3P10600 412 aa24.83■■□□□ 1.57
HOXA3-204ENST00000521401 HOXD8P13378 290 aaPredicted RBP24.83■■□□□ 1.57
HOXA3-204ENST00000521401 CASTP20810 708 aaKnown RBP24.83■■□□□ 1.57
HOXA3-204ENST00000521401 UBA1P22314 1058 aaKnown RBP24.83■■□□□ 1.57
HOXA3-204ENST00000521401 PTPN11Q06124 597 aaPredicted RBP24.83■■□□□ 1.57
HOXA3-204ENST00000521401 RTN1Q16799 776 aa24.83■■□□□ 1.57
HOXA3-204ENST00000521401 FAM47CQ5HY64 1035 aa24.83■■□□□ 1.57
HOXA3-204ENST00000521401 FAM109BQ6ICB4 259 aaPredicted RBP24.83■■□□□ 1.57
HOXA3-204ENST00000521401 DHX37Q8IY37 1157 aaKnown RBP24.83■■□□□ 1.57
HOXA3-204ENST00000521401 SMARCC2Q8TAQ2 1214 aa24.83■■□□□ 1.57
HOXA3-204ENST00000521401 VWCEQ96DN2 955 aa24.83■■□□□ 1.57
HOXA3-204ENST00000521401 JAKMIP1Q96N16 626 aaKnown RBP24.83■■□□□ 1.57
HOXA3-204ENST00000521401 INPP4AQ96PE3 977 aaPredicted RBP24.83■■□□□ 1.57
HOXA3-204ENST00000521401 MTMR10Q9NXD2 777 aa24.83■■□□□ 1.57
HOXA3-204ENST00000521401 PPP4R2Q9NY27 417 aa24.83■■□□□ 1.57
HOXA3-204ENST00000521401 LAMA2P24043 3122 aaKnown RBP24.83■■□□□ 1.56
HOXA3-204ENST00000521401 KLF18A0A0U1RQI7 1052 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 REC8O95072 547 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 SUPT20HL2P0C7V6 817 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 CDC27P30260 824 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 ICAM3P32942 547 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 CCL23P55773 120 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 SMAD3P84022 425 aaKnown RBP24.82■■□□□ 1.56
HOXA3-204ENST00000521401 SEMA3FQ13275 785 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 DGKDQ16760 1214 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 RASIP1Q5U651 963 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 CUL5Q93034 780 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 BCAS3Q9H6U6 928 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 PSTPIP2Q9H939 334 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 IL23AQ9NPF7 189 aa24.82■■□□□ 1.56
HOXA3-204ENST00000521401 SORBS3O60504 671 aa24.81■■□□□ 1.56
HOXA3-204ENST00000521401 STAM2O75886 525 aa24.81■■□□□ 1.56
HOXA3-204ENST00000521401 GGPS1O95749 300 aa24.81■■□□□ 1.56
HOXA3-204ENST00000521401 RCAN1P53805 252 aa24.81■■□□□ 1.56
HOXA3-204ENST00000521401 HSDL1Q3SXM5 330 aa24.81■■□□□ 1.56
HOXA3-204ENST00000521401 ZNF365Q70YC5 407 aa24.81■■□□□ 1.56
HOXA3-204ENST00000521401 SESTD1Q86VW0 696 aa24.81■■□□□ 1.56
HOXA3-204ENST00000521401 CTAGE1Q96RT6 745 aa24.81■■□□□ 1.56
HOXA3-204ENST00000521401 RTEL1Q9NZ71 1219 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms