RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 MYH7BA7E2Y1 1941 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 NEFLP07196 543 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 MYCLP12524 364 aaPredicted RBP19.7■□□□□ 0.74
SQLE-205ENST00000521232 NBPF20Q3BBV1 942 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 KCNV1Q6PIU1 500 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 FCHSD1Q86WN1 690 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 CMTR1Q8N1G2 835 aaKnown RBP19.7■□□□□ 0.74
SQLE-205ENST00000521232 TMEM199Q8N511 208 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 DEFB123Q8N688 67 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 AFG1LQ8WV93 481 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 EMID1Q96A84 441 aaPredicted RBP19.7■□□□□ 0.74
SQLE-205ENST00000521232 PPP1R12CQ9BZL4 782 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 SEC63Q9UGP8 760 aaKnown RBP19.7■□□□□ 0.74
SQLE-205ENST00000521232 MRVI1Q9Y6F6 885 aa19.7■□□□□ 0.74
SQLE-205ENST00000521232 MMP3P08254 477 aa19.69■□□□□ 0.74
SQLE-205ENST00000521232 SUPT20HL2P0C7V6 817 aa19.69■□□□□ 0.74
SQLE-205ENST00000521232 PPIGQ13427 754 aaKnown RBP eCLIP19.69■□□□□ 0.74
SQLE-205ENST00000521232 FAM109BQ6ICB4 259 aaPredicted RBP19.69■□□□□ 0.74
SQLE-205ENST00000521232 NFRKBQ6P4R8 1299 aa19.69■□□□□ 0.74
SQLE-205ENST00000521232 SYNE3Q6ZMZ3 975 aa19.69■□□□□ 0.74
SQLE-205ENST00000521232 TMTC3Q6ZXV5 915 aa19.69■□□□□ 0.74
SQLE-205ENST00000521232 C16orf59Q7L2K0 433 aa19.69■□□□□ 0.74
SQLE-205ENST00000521232 IL31RAQ8NI17 732 aa19.69■□□□□ 0.74
SQLE-205ENST00000521232 PIK3CDO00329 1044 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 HMGB1P09429 215 aaKnown RBP19.68■□□□□ 0.74
SQLE-205ENST00000521232 TGFB3P10600 412 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 CSF2RAP15509 400 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 CCND2P30279 289 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 CYP2C18P33260 490 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 PTPN11Q06124 597 aaPredicted RBP19.68■□□□□ 0.74
SQLE-205ENST00000521232 LAMC2Q13753 1193 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 APOA5Q6Q788 366 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 Q7L0L9 218 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 RAB11FIP4Q86YS3 637 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 NOC4LQ9BVI4 516 aaKnown RBP19.68■□□□□ 0.74
SQLE-205ENST00000521232 HIPK3Q9H422 1215 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 FRMPD4Q14CM0 1322 aa19.68■□□□□ 0.74
SQLE-205ENST00000521232 MEIS2O14770 477 aa19.67■□□□□ 0.74
SQLE-205ENST00000521232 CASTP20810 708 aaKnown RBP19.67■□□□□ 0.74
SQLE-205ENST00000521232 HSPA4P34932 840 aa19.67■□□□□ 0.74
SQLE-205ENST00000521232 SMAD3P84022 425 aaKnown RBP19.67■□□□□ 0.74
SQLE-205ENST00000521232 TMEM240Q5SV17 173 aa19.67■□□□□ 0.74
SQLE-205ENST00000521232 MICU3Q86XE3 530 aa19.67■□□□□ 0.74
SQLE-205ENST00000521232 DHX37Q8IY37 1157 aaKnown RBP19.67■□□□□ 0.74
SQLE-205ENST00000521232 RNPC3Q96LT9 517 aaKnown RBP19.67■□□□□ 0.74
SQLE-205ENST00000521232 TCEANC2Q96MN5 208 aa19.67■□□□□ 0.74
SQLE-205ENST00000521232 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.67■□□□□ 0.74
SQLE-205ENST00000521232 TRMT13Q9NUP7 481 aaKnown RBP19.67■□□□□ 0.74
SQLE-205ENST00000521232 MTMR10Q9NXD2 777 aa19.67■□□□□ 0.74
SQLE-205ENST00000521232 BRPF3Q9ULD4 1205 aa19.67■□□□□ 0.74
SQLE-205ENST00000521232 STAM2O75886 525 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 MRPS9P82933 396 aaKnown RBP19.66■□□□□ 0.74
SQLE-205ENST00000521232 DGKDQ16760 1214 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 MYSM1Q5VVJ2 828 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 USP17L6PQ6QN14 398 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 CCDC82Q8N4S0 544 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 PPTC7Q8NI37 304 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 SMARCC2Q8TAQ2 1214 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 KAT2BQ92831 832 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 CUL5Q93034 780 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 RBM28Q9NW13 759 aaKnown RBP19.66■□□□□ 0.74
SQLE-205ENST00000521232 UMODL1Q5DID0 1318 aa19.66■□□□□ 0.74
SQLE-205ENST00000521232 ZBTB43O43298 467 aa19.65■□□□□ 0.74
SQLE-205ENST00000521232 SP2Q02086 613 aa19.65■□□□□ 0.74
SQLE-205ENST00000521232 FAM47CQ5HY64 1035 aa19.65■□□□□ 0.74
SQLE-205ENST00000521232 CELF3Q5SZQ8 465 aaKnown RBP19.65■□□□□ 0.74
SQLE-205ENST00000521232 ZFP91Q96JP5 570 aaPredicted RBP19.65■□□□□ 0.74
SQLE-205ENST00000521232 PSTPIP2Q9H939 334 aa19.65■□□□□ 0.74
SQLE-205ENST00000521232 IL23AQ9NPF7 189 aa19.65■□□□□ 0.74
SQLE-205ENST00000521232 SNX14Q9Y5W7 946 aa19.65■□□□□ 0.74
SQLE-205ENST00000521232 hCG_1642624A0A1W2PR95 340 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 PPFIA4O75335 1185 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 REC8O95072 547 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 ACRP10323 421 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 CYP2C9P11712 490 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 HOXD8P13378 290 aaPredicted RBP19.64■□□□□ 0.73
SQLE-205ENST00000521232 ICAM3P32942 547 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 RCAN1P53805 252 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 CCL23P55773 120 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 RASIP1Q5U651 963 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 XRRA1Q6P2D8 792 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 PSRC1Q6PGN9 363 aaPredicted RBP19.64■□□□□ 0.73
SQLE-205ENST00000521232 ZNF365Q70YC5 407 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 SESTD1Q86VW0 696 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 INPP4AQ96PE3 977 aaPredicted RBP19.64■□□□□ 0.73
SQLE-205ENST00000521232 WNT8AQ9H1J5 351 aa19.64■□□□□ 0.73
SQLE-205ENST00000521232 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.63■□□□□ 0.73
SQLE-205ENST00000521232 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.63■□□□□ 0.73
SQLE-205ENST00000521232 EPB41L2O43491 1005 aaKnown RBP19.63■□□□□ 0.73
SQLE-205ENST00000521232 GGPS1O95749 300 aa19.63■□□□□ 0.73
SQLE-205ENST00000521232 UBA1P22314 1058 aaKnown RBP19.63■□□□□ 0.73
SQLE-205ENST00000521232 FUT2Q10981 343 aa19.63■□□□□ 0.73
SQLE-205ENST00000521232 RTN1Q16799 776 aa19.63■□□□□ 0.73
SQLE-205ENST00000521232 HSDL1Q3SXM5 330 aa19.63■□□□□ 0.73
SQLE-205ENST00000521232 GNPTABQ3T906 1256 aa19.63■□□□□ 0.73
SQLE-205ENST00000521232 ERICH6BQ5W0A0 696 aa19.63■□□□□ 0.73
SQLE-205ENST00000521232 PPP1R13LQ8WUF5 828 aa19.63■□□□□ 0.73
SQLE-205ENST00000521232 GPKOWQ92917 476 aaPredicted RBP eCLIP19.63■□□□□ 0.731e-7■□□□□ 9.9
SQLE-205ENST00000521232 CDH23Q9H251 3354 aa19.62■□□□□ 0.73
SQLE-205ENST00000521232 CNTNAP5Q8WYK1 1306 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms