RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 CEACAM5P06731 702 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 VIL1P09327 827 aaKnown RBP5.24□□□□□ -1.57
VPS13B-208ENST00000521037 ERCC3P19447 782 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 AP3B2Q13367 1082 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 PKN1Q16512 942 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 KIF4BQ2VIQ3 1234 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 ANGEL2Q5VTE6 544 aaKnown RBP5.24□□□□□ -1.57
VPS13B-208ENST00000521037 SUSD4Q5VX71 490 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 ZNF790Q6PG37 636 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 FAM122AQ96E09 287 aa5.24□□□□□ -1.57
VPS13B-208ENST00000521037 HEXIM2Q96MH2 286 aaKnown RBP5.24□□□□□ -1.57
VPS13B-208ENST00000521037 NIP7Q9Y221 180 aaKnown RBP eCLIP5.24□□□□□ -1.57
VPS13B-208ENST00000521037 IBTKQ9P2D0 1353 aaPredicted RBP5.24□□□□□ -1.57
VPS13B-208ENST00000521037 PIEZO1Q92508 2521 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 TMEM265A0A087WTH1 108 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 GJA8P48165 433 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 FAAP100Q0VG06 881 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 MAP3K12Q12852 859 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 TNIP1Q15025 636 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 C1orf141Q5JVX7 400 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 SLC10A5Q5PT55 438 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 FAM109BQ6ICB4 259 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-208ENST00000521037 SULT6B1Q6IMI4 303 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 SMYD4Q8IYR2 804 aaPredicted RBP5.23□□□□□ -1.57
VPS13B-208ENST00000521037 DPF3Q92784 378 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 DCPSQ96C86 337 aaKnown RBP5.23□□□□□ -1.57
VPS13B-208ENST00000521037 CLMNQ96JQ2 1002 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 HRASLS5Q96KN8 279 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 SLC38A3Q99624 504 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 BCL2L13Q9BXK5 485 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 CARD11Q9BXL7 1154 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 ABCB6Q9NP58 842 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 POLLQ9UGP5 575 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 SNX11Q9Y5W9 270 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 CEMIPQ8WUJ3 1361 aa5.23□□□□□ -1.57
VPS13B-208ENST00000521037 LAMB2P55268 1798 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 LRRC10BA6NIK2 292 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 TSPAN15O95858 294 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 NEFMP07197 916 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 RPS12P25398 132 aaKnown RBP5.22□□□□□ -1.57
VPS13B-208ENST00000521037 SP3Q02447 781 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 ID3Q02535 119 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 AAMPQ13685 434 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 PDE3AQ14432 1141 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 MAP3K11Q16584 847 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 RPS26P11Q5JNZ5 115 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-208ENST00000521037 FYB2Q5VWT5 728 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 LRP10Q7Z4F1 713 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 ZSWIM9Q86XI8 627 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 SP8Q8IXZ3 490 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 ZNF34Q8IZ26 560 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 USP38Q8NB14 1042 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 ERO1AQ96HE7 468 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 ZBED3Q96IU2 234 aaPredicted RBP5.22□□□□□ -1.57
VPS13B-208ENST00000521037 ATXN3LQ9H3M9 355 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 DBNDD1Q9H9R9 158 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 PRDM7Q9NQW5 492 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 IGSF5Q9NSI5 407 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 FAM53CQ9NYF3 392 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 TAF1P21675 1872 aa5.22□□□□□ -1.57
VPS13B-208ENST00000521037 GJB1P08034 283 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 SREBF2Q12772 1141 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 TTLL4Q14679 1199 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 NBPF9Q3BBW0 867 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 SLC9C1Q4G0N8 1177 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 PDZD3Q86UT5 571 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 SIAH1Q8IUQ4 282 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 WNK4Q96J92 1243 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 KRT82Q9NSB4 513 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 CTNND2Q9UQB3 1225 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 AOX1Q06278 1338 aa5.21□□□□□ -1.58
VPS13B-208ENST00000521037 SLFN14P0C7P3 912 aa5.2□□□□□ -1.58
VPS13B-208ENST00000521037 MAGEA10P43363 369 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-208ENST00000521037 MLANAQ16655 118 aa5.2□□□□□ -1.58
VPS13B-208ENST00000521037 SLC4A8Q2Y0W8 1093 aa5.2□□□□□ -1.58
VPS13B-208ENST00000521037 LILRA6Q6PI73 481 aa5.2□□□□□ -1.58
VPS13B-208ENST00000521037 DPP8Q6V1X1 898 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-208ENST00000521037 TTLL7Q6ZT98 887 aa5.2□□□□□ -1.58
VPS13B-208ENST00000521037 LIN37Q96GY3 246 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-208ENST00000521037 CDX2Q99626 313 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-208ENST00000521037 TEX13AQ9BXU3 409 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-208ENST00000521037 TTYH1Q9H313 450 aaPredicted RBP5.2□□□□□ -1.58
VPS13B-208ENST00000521037 PCOLCE2Q9UKZ9 415 aa5.2□□□□□ -1.58
VPS13B-208ENST00000521037 PSME4Q14997 1843 aa5.2□□□□□ -1.58
VPS13B-208ENST00000521037 ADGRA2Q96PE1 1338 aa5.2□□□□□ -1.58
VPS13B-208ENST00000521037 ANKRD36CQ5JPF3 1778 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 NUP98P52948 1817 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 MANSC4A6NHS7 340 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-208ENST00000521037 UNCXA6NJT0 531 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 ECE2O60344 883 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 IGHA2P01877 340 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 GSTP1P09211 210 aaKnown RBP5.19□□□□□ -1.58
VPS13B-208ENST00000521037 HCLS1P14317 486 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-208ENST00000521037 TNNT2P45379 298 aaPredicted RBP5.19□□□□□ -1.58
VPS13B-208ENST00000521037 RAP1GAPP47736 663 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 INHBEP58166 350 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 NKPD1Q17RQ9 610 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 ZC3H12AQ5D1E8 599 aaKnown RBP5.19□□□□□ -1.58
VPS13B-208ENST00000521037 SPACA3Q8IXA5 215 aa5.19□□□□□ -1.58
VPS13B-208ENST00000521037 TDHQ8IZJ6 230 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms