RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 RETREG2Q8NC44 543 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 EMID1Q96A84 441 aaPredicted RBP22.83■■□□□ 1.25
PABPC1-215ENST00000520804 RIOX1Q9H6W3 641 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 SLC28A3Q9HAS3 691 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 NOD1Q9Y239 953 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 TAF6LQ9Y6J9 622 aa22.83■■□□□ 1.25
PABPC1-215ENST00000520804 TANC1Q9C0D5 1861 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 ERICH2A1L162 156 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 E7EWF7 191 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 SGSM2O43147 1006 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 CASTP20810 708 aaKnown RBP22.82■■□□□ 1.24
PABPC1-215ENST00000520804 RABGGTBP53611 331 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 IRX6P78412 446 aaPredicted RBP22.82■■□□□ 1.24
PABPC1-215ENST00000520804 BFSP2Q13515 415 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 STOX1Q6ZVD7 989 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 RALYLQ86SE5 291 aaKnown RBP22.82■■□□□ 1.24
PABPC1-215ENST00000520804 HOMER1Q86YM7 354 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 SAMD3Q8N6K7 520 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 NCOA7Q8NI08 942 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 KAT2BQ92831 832 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 PDCD2LQ9BRP1 358 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 SENP2Q9HC62 589 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 MRVI1Q9Y6F6 885 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 CUL9Q8IWT3 2517 aa22.82■■□□□ 1.24
PABPC1-215ENST00000520804 PRUNE2Q8WUY3 3088 aa22.81■■□□□ 1.24
PABPC1-215ENST00000520804 ATP2A2P16615 1042 aaKnown RBP22.81■■□□□ 1.24
PABPC1-215ENST00000520804 TROAPQ12815 778 aa22.81■■□□□ 1.24
PABPC1-215ENST00000520804 TRAF1Q13077 416 aa22.81■■□□□ 1.24
PABPC1-215ENST00000520804 WTAPQ15007 396 aa22.81■■□□□ 1.24
PABPC1-215ENST00000520804 PTGISQ16647 500 aa22.81■■□□□ 1.24
PABPC1-215ENST00000520804 DGKDQ16760 1214 aa22.81■■□□□ 1.24
PABPC1-215ENST00000520804 PIGSQ96S52 555 aa22.81■■□□□ 1.24
PABPC1-215ENST00000520804 PCDHA11Q9Y5I1 949 aa22.81■■□□□ 1.24
PABPC1-215ENST00000520804 CYTH3O43739 400 aa22.8■■□□□ 1.24
PABPC1-215ENST00000520804 ACTN1P12814 892 aa22.8■■□□□ 1.24
PABPC1-215ENST00000520804 LAMC2Q13753 1193 aa22.8■■□□□ 1.24
PABPC1-215ENST00000520804 SART3Q15020 963 aaKnown RBP22.8■■□□□ 1.24
PABPC1-215ENST00000520804 GDF6Q6KF10 455 aaPredicted RBP22.8■■□□□ 1.24
PABPC1-215ENST00000520804 CTAGE1Q96RT6 745 aa22.8■■□□□ 1.24
PABPC1-215ENST00000520804 RGS20O76081 388 aa22.79■■□□□ 1.24
PABPC1-215ENST00000520804 MYCLP12524 364 aaPredicted RBP22.79■■□□□ 1.24
PABPC1-215ENST00000520804 HOXA13P31271 388 aaPredicted RBP22.79■■□□□ 1.24
PABPC1-215ENST00000520804 ADGRE1Q14246 886 aa22.79■■□□□ 1.24
PABPC1-215ENST00000520804 VSIG10LQ86VR7 867 aa22.79■■□□□ 1.24
PABPC1-215ENST00000520804 PPTC7Q8NI37 304 aa22.79■■□□□ 1.24
PABPC1-215ENST00000520804 MAP4K1Q92918 833 aa22.79■■□□□ 1.24
PABPC1-215ENST00000520804 CHD9Q3L8U1 2897 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 GCOM1H8Y6P7 765 aaPredicted RBP22.78■■□□□ 1.24
PABPC1-215ENST00000520804 POLR2MP0CAP2 368 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 VCANP13611 3396 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 MYOGP15173 224 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 PGM5Q15124 567 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 TMEM67Q5HYA8 995 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 PPP2R2DQ66LE6 453 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 KCNV1Q6PIU1 500 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 DHX37Q8IY37 1157 aaKnown RBP22.78■■□□□ 1.24
PABPC1-215ENST00000520804 CCDC155Q8N6L0 562 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 CAGE1Q8TC20 777 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 KATNAL1Q9BW62 490 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 GTF2IRD1Q9UHL9 959 aa22.78■■□□□ 1.24
PABPC1-215ENST00000520804 PNMA6FA0A0J9YX94 578 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 F2P00734 622 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 PSEN2P49810 448 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 ANTXR2P58335 489 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 CATIPQ7Z7H3 387 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 MB21D2Q8IYB1 491 aaPredicted RBP22.77■■□□□ 1.24
PABPC1-215ENST00000520804 IL31RAQ8NI17 732 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 IGDCC4Q8TDY8 1250 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 AFAP1L1Q8TED9 768 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 SLC9A7Q96T83 725 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 FTOQ9C0B1 505 aaKnown RBP eCLIP22.77■■□□□ 1.24
PABPC1-215ENST00000520804 HDAC6Q9UBN7 1215 aa22.77■■□□□ 1.24
PABPC1-215ENST00000520804 MYH7BA7E2Y1 1941 aa22.76■■□□□ 1.23
PABPC1-215ENST00000520804 HAS3O00219 553 aa22.76■■□□□ 1.23
PABPC1-215ENST00000520804 HOXD8P13378 290 aaPredicted RBP22.76■■□□□ 1.23
PABPC1-215ENST00000520804 MYSM1Q5VVJ2 828 aa22.76■■□□□ 1.23
PABPC1-215ENST00000520804 C7orf31Q8N865 590 aa22.76■■□□□ 1.23
PABPC1-215ENST00000520804 PHOSPHO2Q8TCD6 241 aa22.76■■□□□ 1.23
PABPC1-215ENST00000520804 PPM1EQ8WY54 764 aa22.76■■□□□ 1.23
PABPC1-215ENST00000520804 DHX38Q92620 1227 aaKnown RBP22.76■■□□□ 1.23
PABPC1-215ENST00000520804 RBM8AQ9Y5S9 174 aaKnown RBP22.76■■□□□ 1.23
PABPC1-215ENST00000520804 BAZ2BQ9UIF8 2168 aaKnown RBP22.75■■□□□ 1.23
PABPC1-215ENST00000520804 ZNF286BP0CG31 522 aa22.75■■□□□ 1.23
PABPC1-215ENST00000520804 TGFB3P10600 412 aa22.75■■□□□ 1.23
PABPC1-215ENST00000520804 IGFBP4P22692 258 aa22.75■■□□□ 1.23
PABPC1-215ENST00000520804 CCND2P30279 289 aa22.75■■□□□ 1.23
PABPC1-215ENST00000520804 RBL2Q08999 1139 aa22.75■■□□□ 1.23
PABPC1-215ENST00000520804 MFSD10Q14728 455 aa22.75■■□□□ 1.23
PABPC1-215ENST00000520804 CELF3Q5SZQ8 465 aaKnown RBP22.75■■□□□ 1.23
PABPC1-215ENST00000520804 FCHSD1Q86WN1 690 aa22.75■■□□□ 1.23
PABPC1-215ENST00000520804 ALG1Q9BT22 464 aa22.75■■□□□ 1.23
PABPC1-215ENST00000520804 TRIP12Q14669 1992 aaPredicted RBP22.75■■□□□ 1.23
PABPC1-215ENST00000520804 PPFIA4O75335 1185 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 BAIAP3O94812 1187 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 GGPS1O95749 300 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 SELPP16109 830 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 SP2Q02086 613 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 GPNMBQ14956 572 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 KIAA0753Q2KHM9 967 aa22.74■■□□□ 1.23
PABPC1-215ENST00000520804 HSDL1Q3SXM5 330 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms