RNA–Protein interactions for RNA: ENST00000520119.1

IGHV1-17-201, Transcript of immunoglobulin heavy variable 1-17 (pseudogene), humanhuman

BASIC

Gene IGHV1-17, Length 334 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-17-201ENST00000520119 ENAHQ8N8S7 591 aaPredicted RBP12.89□□□□□ -0.35
IGHV1-17-201ENST00000520119 OR6J1Q8NGC5 347 aa12.89□□□□□ -0.35
IGHV1-17-201ENST00000520119 KHSRPQ92945 711 aaKnown RBP eCLIP12.89□□□□□ -0.35
IGHV1-17-201ENST00000520119 TIFAQ96CG3 184 aa12.89□□□□□ -0.35
IGHV1-17-201ENST00000520119 NOC4LQ9BVI4 516 aaKnown RBP12.89□□□□□ -0.35
IGHV1-17-201ENST00000520119 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
IGHV1-17-201ENST00000520119 ALDH8A1Q9H2A2 487 aaPredicted RBP12.89□□□□□ -0.35
IGHV1-17-201ENST00000520119 ABCB11O95342 1321 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 TTC28Q96AY4 2481 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 KPNA6O60684 536 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 FGBP02675 491 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 MYL3P08590 195 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 PARP1P09874 1014 aaKnown RBP12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 TTLL4Q14679 1199 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 MCF2L2Q86YR7 1114 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 RPUSD2Q8IZ73 545 aaKnown RBP12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 ADGRF4Q8IZF3 695 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 HERVK_113Q902F9 699 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 UBAC1Q9BSL1 405 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 MTG1Q9BT17 334 aaPredicted RBP12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 CPVLQ9H3G5 476 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 ZNF576Q9H609 170 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 TNKSO95271 1327 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 UMODL1Q5DID0 1318 aa12.88□□□□□ -0.35
IGHV1-17-201ENST00000520119 SCN10AQ9Y5Y9 1956 aa12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 A6NJR5 290 aa12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 TXNP10599 105 aaKnown RBP12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 CCL23P55773 120 aa12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 GRIN2CQ14957 1233 aa12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 FBXO11Q86XK2 927 aa12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 GPIHBP1Q8IV16 184 aa12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 NSUN6Q8TEA1 469 aaKnown RBP12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 PBX4Q9BYU1 374 aa12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 ZSWIM6Q9HCJ5 1215 aa12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 MRPL11Q9Y3B7 192 aaKnown RBP12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 MYH6P13533 1939 aa12.87□□□□□ -0.35
IGHV1-17-201ENST00000520119 CHD9Q3L8U1 2897 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 GRXCR1A8MXD5 290 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 DHX16O60231 1041 aaKnown RBP12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 NUDT7P0C024 238 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 RAB30Q15771 203 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 QRICH1Q2TAL8 776 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 IFIT1BQ5T764 474 aaKnown RBP12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 NFRKBQ6P4R8 1299 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 SYTL5Q8TDW5 730 aaPredicted RBP12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 IWS1Q96ST2 819 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 WNT8AQ9H1J5 351 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 JMJD4Q9H9V9 463 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 TRMT13Q9NUP7 481 aaKnown RBP12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 MSRAQ9UJ68 235 aa12.86□□□□□ -0.35
IGHV1-17-201ENST00000520119 SNPHO15079 494 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 PFKMP08237 780 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 PBX2P40425 430 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 PTPN11Q06124 597 aaPredicted RBP12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 TRDNQ13061 729 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 STXBP2Q15833 593 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 NBPF20Q3BBV1 942 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 TTC22Q5TAA0 569 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 CCDC62Q6P9F0 684 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 OTOP2Q7RTS6 562 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 RUFY2Q8WXA3 655 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 TBC1D5Q92609 795 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 COPS5Q92905 334 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 TAAR1Q96RJ0 339 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 AMNQ9BXJ7 453 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 COL25A1Q9BXS0 654 aaPredicted RBP12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 VAT1LQ9HCJ6 419 aa12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 CXXC1Q9P0U4 656 aaPredicted RBP12.85□□□□□ -0.35
IGHV1-17-201ENST00000520119 ARIH2O95376 493 aa12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 CYP2C9P11712 490 aa12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 GSPT1P15170 499 aaKnown RBP12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 SEC23AQ15436 765 aa12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 FAM47CQ5HY64 1035 aa12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 SCLYQ96I15 445 aa12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 GAS2L1Q99501 681 aaPredicted RBP12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 IL25Q9H293 177 aa12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 MAP3K20Q9NYL2 800 aaKnown RBP12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 COL20A1Q9P218 1284 aa12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 SLC4A7Q9Y6M7 1214 aa12.84□□□□□ -0.35
IGHV1-17-201ENST00000520119 KLRF2D3W0D1 207 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 EIF3JO75822 258 aaKnown RBP12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 CFBP00751 764 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 GH1P01241 217 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 RFC2P35250 354 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 GHRHRQ02643 423 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 TRAF1Q13077 416 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 ARHGEF16Q5VV41 709 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 SEPT14Q6ZU15 432 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 STAG2Q8N3U4 1231 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 SAMD3Q8N6K7 520 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 SLC28A3Q9HAS3 691 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 KIAA1217Q5T5P2 1943 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 CHD7Q9P2D1 2997 aa12.83□□□□□ -0.36
IGHV1-17-201ENST00000520119 BAZ2BQ9UIF8 2168 aaKnown RBP12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 ERICH2A1L162 156 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 PALM3A6NDB9 673 aaPredicted RBP12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 ZBTB5O15062 677 aa12.82□□□□□ -0.36
IGHV1-17-201ENST00000520119 NR3C2P08235 984 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms