RNA–Protein interactions for RNA: ENST00000519607.5

NUDCD1-203, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 2,286 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-203ENST00000519607 TANGO6Q9C0B7 1094 aa12.58□□□□□ -0.4
NUDCD1-203ENST00000519607 UBA5Q9GZZ9 404 aa12.58□□□□□ -0.4
NUDCD1-203ENST00000519607 ARHGAP20Q9P2F6 1191 aa12.58□□□□□ -0.4
NUDCD1-203ENST00000519607 HYOU1Q9Y4L1 999 aa12.58□□□□□ -0.4
NUDCD1-203ENST00000519607 DDX60LQ5H9U9 1706 aaKnown RBP12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 USP17L5A8MUK1 530 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 ZNF185O15231 689 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 EIF4A3P38919 411 aaKnown RBP12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 MAGEA1P43355 309 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 CCDC155Q8N6L0 562 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 HPS3Q969F9 1004 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 SELENOOQ9BVL4 669 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 TMEM260Q9NX78 707 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 TSKSQ9UJT2 592 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 FAM184BQ9ULE4 1060 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 UFL1O94874 794 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 PDHBP11177 359 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 TRAPPC3LQ5T215 181 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 PPP4R3AQ6IN85 833 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 PPP1R18Q6NYC8 613 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 ZNF572Q7Z3I7 529 aaPredicted RBP12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 KRT26Q7Z3Y9 468 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 MYOCDQ8IZQ8 938 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 DDX12PQ92771 950 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 PNMA5Q96PV4 448 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 NAP1L4Q99733 375 aaKnown RBP12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 GGA1Q9UJY5 639 aa12.57□□□□□ -0.4
NUDCD1-203ENST00000519607 SSU72P8A0A1W2PR75 194 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 LRRC53A6NM62 1247 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 ZNF263O14978 683 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 TOM1O60784 492 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 SYF2O95926 243 aaKnown RBP12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 PLEKP08567 350 aaPredicted RBP12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 IL1R1P14778 569 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 NOVP48745 357 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 FKBP3Q00688 224 aaKnown RBP12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 C2orf54Q08AI8 447 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 MFSD14BQ5SR56 506 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 CREG2Q8IUH2 290 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 RNF10Q8N5U6 811 aaKnown RBP12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 NOX5Q96PH1 765 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 TRERF1Q96PN7 1200 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 NT5C3AQ9H0P0 336 aa12.56□□□□□ -0.4
NUDCD1-203ENST00000519607 TNRC6CQ9HCJ0 1690 aaKnown RBP12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 FRMPD2Q68DX3 1309 aaPredicted RBP12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 KDM3AQ9Y4C1 1321 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 GOLGA6BA6NDN3 693 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 PDE2AO00408 941 aaPredicted RBP12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 PJA2O43164 708 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 MOCS3O95396 460 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 GNA14O95837 355 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 MRPL12P52815 198 aaKnown RBP12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 NAP1L1P55209 391 aaKnown RBP12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 SLC9C1Q4G0N8 1177 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 CCDC40Q4G0X9 1142 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 COA7Q96BR5 231 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 OSBPL9Q96SU4 736 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 MTMR4Q9NYA4 1195 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 RNF14Q9UBS8 474 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 COL4A3BPQ9Y5P4 624 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 PNMA6FA0A0J9YX94 578 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 POTEMA6NI47 508 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 SLC37A4O43826 429 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 ZMYND10O75800 440 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 TDP2O95551 362 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 GCFC2P16383 781 aaKnown RBP12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 TNNI2P48788 182 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 GPSM2P81274 684 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 MAPK8IP2Q13387 824 aaPredicted RBP12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 TDRD12Q587J7 1177 aaKnown RBP12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 SPATA4Q8NEY3 305 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 SYN2Q92777 582 aaPredicted RBP12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 CUL5Q93034 780 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 CAPN6Q9Y6Q1 641 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 PLIN4Q96Q06 1357 aa12.55□□□□□ -0.4
NUDCD1-203ENST00000519607 BTAF1O14981 1849 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 UBAP1LF5GYI3 381 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 TRAF5O00463 557 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 GGCXP38435 758 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 RHBDL3P58872 404 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 SLC20A2Q08357 652 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 GLE1Q53GS7 698 aaKnown RBP12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 PDXDC1Q6P996 788 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 SRLQ86TD4 932 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 FAM76AQ8TAV0 307 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 SMCR8Q8TEV9 937 aaPredicted RBP12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 ZBTB9Q96C00 473 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 DRC1Q96MC2 740 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 MLXIPQ9HAP2 919 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 CEP72Q9P209 647 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 DDX25Q9UHL0 483 aaKnown RBP12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 PCDHA12Q9UN75 941 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 MYO1CO00159 1063 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 OPA1O60313 960 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 PRPF6O94906 941 aaKnown RBP12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 TTLL1O95922 423 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 CFAP221Q4G0U5 840 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 TMEM119Q4V9L6 283 aa12.54□□□□□ -0.4
NUDCD1-203ENST00000519607 SFMBT2Q5VUG0 894 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms